RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 PRSS22Q9GZN4 317 aa15.47■□□□□ 0.07
CLIP2-201ENST00000223398 ZNF319Q9P2F9 582 aa15.47■□□□□ 0.07
CLIP2-201ENST00000223398 THSD7BQ9C0I4 1608 aa15.47■□□□□ 0.07
CLIP2-201ENST00000223398 NBR2O15453 112 aa15.46■□□□□ 0.07
CLIP2-201ENST00000223398 IGFBP2P18065 325 aa15.46■□□□□ 0.07
CLIP2-201ENST00000223398 HERPUD1Q15011 391 aa15.46■□□□□ 0.07
CLIP2-201ENST00000223398 PRR30Q53SZ7 412 aaPredicted RBP15.46■□□□□ 0.07
CLIP2-201ENST00000223398 DOCK4Q8N1I0 1966 aa15.46■□□□□ 0.07
CLIP2-201ENST00000223398 IL6RP08887 468 aaPredicted RBP15.46■□□□□ 0.07
CLIP2-201ENST00000223398 MBNL2Q5VZF2 373 aaKnown RBP15.46■□□□□ 0.07
CLIP2-201ENST00000223398 GPR82Q96P67 336 aa15.46■□□□□ 0.07
CLIP2-201ENST00000223398 SPTBN1Q01082 2364 aaKnown RBP15.46■□□□□ 0.07
CLIP2-201ENST00000223398 AP4M1O00189 453 aa15.46■□□□□ 0.07
CLIP2-201ENST00000223398 EGR1P18146 543 aa15.46■□□□□ 0.07
CLIP2-201ENST00000223398 FHITP49789 147 aa15.46■□□□□ 0.07
CLIP2-201ENST00000223398 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.46■□□□□ 0.07
CLIP2-201ENST00000223398 PLSCR4Q9NRQ2 329 aa15.46■□□□□ 0.07
CLIP2-201ENST00000223398 C19orf67A6NJJ6 358 aa15.46■□□□□ 0.07
CLIP2-201ENST00000223398 SAA1P0DJI8 122 aaPredicted RBP15.46■□□□□ 0.07
CLIP2-201ENST00000223398 PAQR4Q8N4S7 273 aaPredicted RBP15.46■□□□□ 0.07
CLIP2-201ENST00000223398 SELENOKQ9Y6D0 94 aa15.46■□□□□ 0.07
CLIP2-201ENST00000223398 CBY3A6NI87 242 aa15.46■□□□□ 0.06
CLIP2-201ENST00000223398 GALNT14Q96FL9 552 aa15.46■□□□□ 0.06
CLIP2-201ENST00000223398 JMJD8Q96S16 334 aa15.46■□□□□ 0.06
CLIP2-201ENST00000223398 NPIPB7O75200 414 aa15.45■□□□□ 0.06
CLIP2-201ENST00000223398 MST1P26927 711 aa15.45■□□□□ 0.06
CLIP2-201ENST00000223398 KLHDC3Q9BQ90 382 aa15.45■□□□□ 0.06
CLIP2-201ENST00000223398 DICER1Q9UPY3 1922 aaKnown RBP15.45■□□□□ 0.06
CLIP2-201ENST00000223398 GATA2P23769 480 aaPredicted RBP15.45■□□□□ 0.06
CLIP2-201ENST00000223398 BMPERQ8N8U9 685 aa15.45■□□□□ 0.06
CLIP2-201ENST00000223398 NBASA2RRP1 2371 aa15.45■□□□□ 0.06
CLIP2-201ENST00000223398 LYPD3O95274 346 aa15.45■□□□□ 0.06
CLIP2-201ENST00000223398 SELLP14151 372 aa15.45■□□□□ 0.06
CLIP2-201ENST00000223398 WDR25Q64LD2 544 aaPredicted RBP15.45■□□□□ 0.06
CLIP2-201ENST00000223398 CLDND2Q8NHS1 167 aa15.45■□□□□ 0.06
CLIP2-201ENST00000223398 A0A0B4J293 547 aa15.44■□□□□ 0.06
CLIP2-201ENST00000223398 J3QR89 54 aa15.44■□□□□ 0.06
CLIP2-201ENST00000223398 CEACAM4O75871 244 aa15.44■□□□□ 0.06
CLIP2-201ENST00000223398 AQP10Q96PS8 301 aa15.44■□□□□ 0.06
CLIP2-201ENST00000223398 TCF20Q9UGU0 1960 aaKnown RBP15.44■□□□□ 0.06
CLIP2-201ENST00000223398 STPG2Q8N412 459 aa15.44■□□□□ 0.06
CLIP2-201ENST00000223398 NUDT3O95989 172 aa15.44■□□□□ 0.06
CLIP2-201ENST00000223398 ZNF660Q6AZW8 331 aaPredicted RBP15.44■□□□□ 0.06
CLIP2-201ENST00000223398 IGKV1-9A0A0C4DH69 117 aa15.44■□□□□ 0.06
CLIP2-201ENST00000223398 GTF3AQ92664 365 aaKnown RBP15.44■□□□□ 0.06
CLIP2-201ENST00000223398 VPS25Q9BRG1 176 aa15.44■□□□□ 0.06
CLIP2-201ENST00000223398 NMUP48645 174 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 TFF3Q07654 80 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 Q5BKY6 102 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 GTF2H5Q6ZYL4 71 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 LHFPL5Q8TAF8 219 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 EFNA4P52798 201 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 MDS2Q8NDY4 140 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 SPSB4Q96A44 273 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 DUX3Q96PT4 197 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 TCRBV4S1A1TA0A5B7 111 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 PRR32B1ATL7 298 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 TIMM23O14925 209 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 MYO7BQ6PIF6 2116 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 LY6HO94772 140 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 GCHFRP30047 84 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 MRPL32Q9BYC8 188 aaKnown RBP15.43■□□□□ 0.06
CLIP2-201ENST00000223398 MUC21A0A0G2JKD1 596 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 MUC21A0A140T8X8 626 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 MUC21Q5SSG8 566 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 GATAD1Q8WUU5 269 aa15.43■□□□□ 0.06
CLIP2-201ENST00000223398 C8orf46Q8TAG6 207 aa15.42■□□□□ 0.06
CLIP2-201ENST00000223398 HEATR5BQ9P2D3 2071 aa15.42■□□□□ 0.06
CLIP2-201ENST00000223398 TMEM219Q86XT9 240 aa15.42■□□□□ 0.06
CLIP2-201ENST00000223398 C1QTNF9BB2RNN3 333 aa15.42■□□□□ 0.06
CLIP2-201ENST00000223398 C1QTNF9P0C862 333 aa15.42■□□□□ 0.06
CLIP2-201ENST00000223398 KLRD1Q13241 179 aa15.42■□□□□ 0.06
CLIP2-201ENST00000223398 VN1R17PQ8TDU5 208 aa15.42■□□□□ 0.06
CLIP2-201ENST00000223398 IL18BPO95998 194 aa15.42■□□□□ 0.06
CLIP2-201ENST00000223398 ACAA1P09110 424 aaPredicted RBP15.42■□□□□ 0.06
CLIP2-201ENST00000223398 TEX45Q8NA69 505 aa15.42■□□□□ 0.06
CLIP2-201ENST00000223398 NEUROG3Q9Y4Z2 214 aa15.42■□□□□ 0.06
CLIP2-201ENST00000223398 TRAV24A0A0B4J272 114 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 M0R381 172 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 GCSHP23434 173 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 OR10S1Q8NGN2 331 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 GLMPQ8WWB7 406 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 DOCK8Q8NF50 2099 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 MORN2Q502X0 79 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 PEMTQ9UBM1 199 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 PRSS8Q16651 343 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 SMUG1Q53HV7 270 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 BRD3OSQ6XYD6 125 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 ST6GALNAC3Q8NDV1 305 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 PSMB11A5LHX3 300 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 TRAF4Q9BUZ4 470 aaPredicted RBP15.41■□□□□ 0.06
CLIP2-201ENST00000223398 IGKV1D-13A0A0B4J2D9 117 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 GCGP01275 180 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 NBEAP1P0C6P0 100 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 IGKV1-13P0DP09 117 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 LINC01587Q99440 93 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 TXNDC17Q9BRA2 123 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 NPCDR1Q9BY65 106 aa15.41■□□□□ 0.06
CLIP2-201ENST00000223398 RPS20P60866 119 aaKnown RBP15.4■□□□□ 0.06
CLIP2-201ENST00000223398 RND3P61587 244 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms