RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 TRAPPC2P0DI81 140 aa10.68□□□□□ -0.7
UPK1A-201ENST00000222275 TRAPPC2BP0DI82 140 aa10.68□□□□□ -0.7
UPK1A-201ENST00000222275 NDPQ00604 133 aa10.68□□□□□ -0.7
UPK1A-201ENST00000222275 FOXE3Q13461 319 aa10.68□□□□□ -0.7
UPK1A-201ENST00000222275 C2orf68Q2NKX9 166 aa10.68□□□□□ -0.7
UPK1A-201ENST00000222275 CXorf66Q5JRM2 361 aaPredicted RBP10.68□□□□□ -0.7
UPK1A-201ENST00000222275 TMEM65Q6PI78 240 aa10.68□□□□□ -0.7
UPK1A-201ENST00000222275 MINDY2Q8NBR6 621 aa10.68□□□□□ -0.7
UPK1A-201ENST00000222275 LHFPL5Q8TAF8 219 aa10.68□□□□□ -0.7
UPK1A-201ENST00000222275 FYTTD1Q96QD9 318 aaKnown RBP10.68□□□□□ -0.7
UPK1A-201ENST00000222275 SLA2Q9H6Q3 261 aa10.68□□□□□ -0.7
UPK1A-201ENST00000222275 ZFP57Q9NU63 452 aa10.68□□□□□ -0.7
UPK1A-201ENST00000222275 TMEM14BQ9NUH8 114 aa10.68□□□□□ -0.7
UPK1A-201ENST00000222275 COA4Q9NYJ1 87 aa10.68□□□□□ -0.7
UPK1A-201ENST00000222275 LINC00527Q9UJ94 153 aa10.68□□□□□ -0.7
UPK1A-201ENST00000222275 WSB1Q9Y6I7 421 aa10.68□□□□□ -0.7
UPK1A-201ENST00000222275 A0A1B0GU03 582 aa10.67□□□□□ -0.7
UPK1A-201ENST00000222275 A0A1W2PN81 502 aa10.67□□□□□ -0.7
UPK1A-201ENST00000222275 INMT-MINDY4F8WBC2 141 aa10.67□□□□□ -0.7
UPK1A-201ENST00000222275 BRI3O95415 125 aa10.67□□□□□ -0.7
UPK1A-201ENST00000222275 PRB2P02812 416 aaPredicted RBP10.67□□□□□ -0.7
UPK1A-201ENST00000222275 SULT1A3P0DMM9 295 aa10.67□□□□□ -0.7
UPK1A-201ENST00000222275 SULT1A4P0DMN0 295 aa10.67□□□□□ -0.7
UPK1A-201ENST00000222275 EGR2P11161 476 aaPredicted RBP10.67□□□□□ -0.7
UPK1A-201ENST00000222275 SLC25A6P12236 298 aa10.67□□□□□ -0.7
UPK1A-201ENST00000222275 PPIFP30405 207 aaKnown RBP10.67□□□□□ -0.7
UPK1A-201ENST00000222275 CHRNA7P36544 502 aa10.67□□□□□ -0.7
UPK1A-201ENST00000222275 OR2B8PP59922 312 aa10.67□□□□□ -0.7
UPK1A-201ENST00000222275 HSPE1P61604 102 aaKnown RBP10.67□□□□□ -0.7
UPK1A-201ENST00000222275 SSBP2P81877 361 aaPredicted RBP10.67□□□□□ -0.7
UPK1A-201ENST00000222275 CFHR3Q02985 330 aa10.67□□□□□ -0.7
UPK1A-201ENST00000222275 RGS21Q2M5E4 152 aa10.67□□□□□ -0.7
UPK1A-201ENST00000222275 OR52E5Q8NH55 327 aa10.67□□□□□ -0.7
UPK1A-201ENST00000222275 ZNF431Q8TF32 576 aaPredicted RBP10.67□□□□□ -0.7
UPK1A-201ENST00000222275 MITD1Q8WV92 249 aa10.67□□□□□ -0.7
UPK1A-201ENST00000222275 MARVELD1Q9BSK0 173 aa10.67□□□□□ -0.7
UPK1A-201ENST00000222275 FAM103A1Q9BTL3 118 aaKnown RBP10.67□□□□□ -0.7
UPK1A-201ENST00000222275 TRAV3A0A0B4J244 114 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 TEX50A0A1B0GTY4 177 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 NPIPB5A8MRT5 1133 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 G3V318 75 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 IGLV1-40P01703 118 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 CD83Q01151 205 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 SMCO1Q147U7 214 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 BEAN1Q3B7T3 259 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 ANKRD55Q3KP44 614 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 C19orf54Q5BKX5 351 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 LYZL2Q7Z4W2 148 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 ZNF329Q86UD4 541 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 TTC9CQ8N5M4 171 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 OR1L6Q8NGR2 347 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 GPR146Q96CH1 333 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 NDUFA4L2Q9NRX3 87 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 NSG2Q9Y328 171 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 FBXO7Q9Y3I1 522 aa10.66□□□□□ -0.7
UPK1A-201ENST00000222275 A0A0B4J293 547 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 TCRBV4S1A1TA0A5B7 111 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 SNRPGP15A8MWD9 76 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 IFNA17P01571 189 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 HIST1H1BP16401 226 aaKnown RBP10.65□□□□□ -0.7
UPK1A-201ENST00000222275 SPCS3P61009 180 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 ERHP84090 104 aaKnown RBP10.65□□□□□ -0.7
UPK1A-201ENST00000222275 PRCDQ00LT1 54 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 AARDQ4LEZ3 155 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 OXLD1Q5BKU9 147 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 NMSQ5H8A3 153 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 C10orf55Q5SWW7 151 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 SAMD5Q5TGI4 173 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 RNF152Q8N8N0 203 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 HINT2Q9BX68 163 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 PLEKHA3Q9HB20 300 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 ENY2Q9NPA8 101 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 ZNF355PQ9NSJ1 428 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 THYN1Q9P016 225 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 CACNG5Q9UF02 275 aa10.65□□□□□ -0.7
UPK1A-201ENST00000222275 TSSC4Q9Y5U2 329 aaPredicted RBP10.65□□□□□ -0.7
UPK1A-201ENST00000222275 A0A0G2JLM5 398 aa10.64□□□□□ -0.71
UPK1A-201ENST00000222275 TEX22C9J3V5 150 aa10.64□□□□□ -0.71
UPK1A-201ENST00000222275 INS-IGF2F8WCM5 200 aa10.64□□□□□ -0.71
UPK1A-201ENST00000222275 CRYGCP07315 174 aa10.64□□□□□ -0.71
UPK1A-201ENST00000222275 PF4V1P10720 104 aa10.64□□□□□ -0.71
UPK1A-201ENST00000222275 PSMB8P28062 276 aa10.64□□□□□ -0.71
UPK1A-201ENST00000222275 PSMB6P28072 239 aa10.64□□□□□ -0.71
UPK1A-201ENST00000222275 NDUFA11Q86Y39 141 aa10.64□□□□□ -0.71
UPK1A-201ENST00000222275 C12orf45Q8N5I9 185 aaPredicted RBP10.64□□□□□ -0.71
UPK1A-201ENST00000222275 OR5T1Q8NG75 326 aa10.64□□□□□ -0.71
UPK1A-201ENST00000222275 OR1S1Q8NH92 325 aa10.64□□□□□ -0.71
UPK1A-201ENST00000222275 PRR13Q9NZ81 148 aa10.64□□□□□ -0.71
UPK1A-201ENST00000222275 COL7A1Q02388 2944 aa10.63□□□□□ -0.71
UPK1A-201ENST00000222275 A0A1W2PRX2 142 aa10.63□□□□□ -0.71
UPK1A-201ENST00000222275 FAM90A26D6RGX4 464 aa10.63□□□□□ -0.71
UPK1A-201ENST00000222275 ST8SIA3O43173 380 aa10.63□□□□□ -0.71
UPK1A-201ENST00000222275 MED6O75586 246 aa10.63□□□□□ -0.71
UPK1A-201ENST00000222275 LY86O95711 162 aa10.63□□□□□ -0.71
UPK1A-201ENST00000222275 HOXB5P09067 269 aa10.63□□□□□ -0.71
UPK1A-201ENST00000222275 DEFA4P12838 97 aa10.63□□□□□ -0.71
UPK1A-201ENST00000222275 CDX1P47902 265 aaPredicted RBP10.63□□□□□ -0.71
UPK1A-201ENST00000222275 RAB9AP51151 201 aa10.63□□□□□ -0.71
UPK1A-201ENST00000222275 SUB1P53999 127 aaKnown RBP eCLIP10.63□□□□□ -0.71
UPK1A-201ENST00000222275 FAM209BQ5JX69 171 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms