RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ZNF71Q9NQZ8 489 aaPredicted RBP12.45□□□□□ -0.42
EFNB1-201ENST00000204961 TRAV1-1A0A0B4J248 108 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 TRAV5A0A0B4J249 113 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 BHLHA15Q7RTS1 189 aaPredicted RBP12.45□□□□□ -0.42
EFNB1-201ENST00000204961 LINC01551Q86U37 167 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 FKBP11Q9NYL4 201 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 PAM16Q9Y3D7 125 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 TRBV6-6A0A0A6YYG2 114 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 A0A1W2PRD5 423 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 A0A1W2PRF3 423 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 A0A1W2PRM7 423 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 ENSAO43768 121 aaKnown RBP12.45□□□□□ -0.42
EFNB1-201ENST00000204961 MRPS11P82912 194 aaKnown RBP12.45□□□□□ -0.42
EFNB1-201ENST00000204961 TOMM20LQ6UXN7 152 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 CCL17Q92583 94 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 PLEKHA3Q9HB20 300 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 TRBV24-1A0A075B6N3 115 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 SAA2-SAA4A0A096LPE2 208 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 SAA2P0DJI9 122 aaPredicted RBP12.44□□□□□ -0.42
EFNB1-201ENST00000204961 TIMP3P35625 211 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 SUMO1P63165 101 aaKnown RBP12.44□□□□□ -0.42
EFNB1-201ENST00000204961 TBX15Q96SF7 602 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 ASCL2Q99929 193 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 CALYQ9NYX4 217 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 TRAV34A0A0B4J273 112 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 RAB29O14966 203 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 TFPI2P48307 235 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 RND2P52198 227 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 CT45A1Q5HYN5 189 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 DPPA3Q6W0C5 159 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 BAGE3Q86Y29 109 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 BAGE2Q86Y30 109 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 STPG3Q8N7X2 389 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 CT45A3Q8NHU0 189 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 NOL4LQ96MY1 436 aaPredicted RBP12.44□□□□□ -0.42
EFNB1-201ENST00000204961 M0R143 59 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 NPSP0C0P6 89 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 DIAPH2-AS1Q14236 149 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 OR8I2Q8N0Y5 310 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 OR9G1Q8NH87 305 aa12.44□□□□□ -0.42
EFNB1-201ENST00000204961 MKRN2OSH3BPM6 223 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 FTH1P19P0C7X4 201 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 NTF3P20783 257 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 KCNIP4Q6PIL6 250 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 ATOH7Q8N100 152 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 TMEM170AQ8WVE7 144 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 STARD4Q96DR4 205 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 MS4A10Q96PG2 267 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 SAMD10Q9BYL1 202 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 MANBALQ9NQG1 85 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 PPIAL4AQ9Y536 164 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 IL6RP08887 468 aaPredicted RBP12.43□□□□□ -0.42
EFNB1-201ENST00000204961 CHRNB4P30926 498 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 ADMP35318 185 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 RPP30P78346 268 aaKnown RBP12.43□□□□□ -0.42
EFNB1-201ENST00000204961 SRSF7Q16629 238 aaKnown RBP eCLIP12.43□□□□□ -0.42
EFNB1-201ENST00000204961 ARSJQ5FYB0 599 aaPredicted RBP12.43□□□□□ -0.42
EFNB1-201ENST00000204961 PEAR1Q5VY43 1037 aaPredicted RBP12.43□□□□□ -0.42
EFNB1-201ENST00000204961 OR4A47Q6IF82 309 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 CIB3Q96Q77 187 aaPredicted RBP12.43□□□□□ -0.42
EFNB1-201ENST00000204961 CLCF1Q9UBD9 225 aa12.43□□□□□ -0.42
EFNB1-201ENST00000204961 C19orf67A6NJJ6 358 aa12.42□□□□□ -0.42
EFNB1-201ENST00000204961 NPY1RP25929 384 aa12.42□□□□□ -0.42
EFNB1-201ENST00000204961 CNN1P51911 297 aaKnown RBP12.42□□□□□ -0.42
EFNB1-201ENST00000204961 IQCJQ1A5X6 159 aa12.42□□□□□ -0.42
EFNB1-201ENST00000204961 PQLC2Q6ZP29 291 aa12.42□□□□□ -0.42
EFNB1-201ENST00000204961 OR2T6Q8NHC8 308 aa12.42□□□□□ -0.42
EFNB1-201ENST00000204961 SARAFQ96BY9 339 aa12.42□□□□□ -0.42
EFNB1-201ENST00000204961 P2RX4Q99571 388 aa12.42□□□□□ -0.42
EFNB1-201ENST00000204961 GGTLC1Q9BX51 225 aa12.42□□□□□ -0.42
EFNB1-201ENST00000204961 FCN1O00602 326 aa12.42□□□□□ -0.42
EFNB1-201ENST00000204961 PMCHP20382 165 aa12.42□□□□□ -0.42
EFNB1-201ENST00000204961 OR10J1P30954 320 aa12.42□□□□□ -0.42
EFNB1-201ENST00000204961 KLF3P57682 345 aaPredicted RBP12.42□□□□□ -0.42
EFNB1-201ENST00000204961 KRTDAPP60985 99 aa12.42□□□□□ -0.42
EFNB1-201ENST00000204961 SP5Q6BEB4 398 aaPredicted RBP12.42□□□□□ -0.42
EFNB1-201ENST00000204961 VN1R17PQ8TDU5 208 aa12.42□□□□□ -0.42
EFNB1-201ENST00000204961 C15orf65H3BRN8 121 aa12.41□□□□□ -0.42
EFNB1-201ENST00000204961 GFRA3O60609 400 aa12.41□□□□□ -0.42
EFNB1-201ENST00000204961 TNFAIP6P98066 277 aaPredicted RBP12.41□□□□□ -0.42
EFNB1-201ENST00000204961 FAM90A1Q86YD7 464 aa12.41□□□□□ -0.42
EFNB1-201ENST00000204961 BLNKQ8WV28 456 aa12.41□□□□□ -0.42
EFNB1-201ENST00000204961 TNRC6BQ9UPQ9 1833 aaKnown RBP12.41□□□□□ -0.42
EFNB1-201ENST00000204961 HPRT1P00492 218 aa12.41□□□□□ -0.42
EFNB1-201ENST00000204961 HTD2P86397 168 aa12.41□□□□□ -0.42
EFNB1-201ENST00000204961 ZNF474Q6S9Z5 364 aaPredicted RBP12.41□□□□□ -0.42
EFNB1-201ENST00000204961 OR10G8Q8NGN5 311 aa12.41□□□□□ -0.42
EFNB1-201ENST00000204961 SFRP2Q96HF1 295 aa12.41□□□□□ -0.42
EFNB1-201ENST00000204961 RYDENQ9NUL5 291 aaKnown RBP12.41□□□□□ -0.42
EFNB1-201ENST00000204961 WDR83OSQ9Y284 106 aa12.41□□□□□ -0.42
EFNB1-201ENST00000204961 SRRM4A7MD48 611 aaKnown RBP12.4□□□□□ -0.42
EFNB1-201ENST00000204961 J3QR06 171 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 TGOLN2O43493 480 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 IGKV3-15P01624 115 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 ACSF3Q4G176 576 aaPredicted RBP12.4□□□□□ -0.42
EFNB1-201ENST00000204961 HCP5Q6MZN7 132 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 SLC24A4Q8NFF2 622 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 PARD6AQ9NPB6 346 aa12.4□□□□□ -0.42
EFNB1-201ENST00000204961 POLR3KQ9Y2Y1 108 aaPredicted RBP12.4□□□□□ -0.42
EFNB1-201ENST00000204961 SNURFLB1AK76 121 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms