RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Chst1Q9EQC0 411 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Nckap5E9QAE1 1909 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Gm13083A2AGW5 501 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Olfr1335B2RVY8 335 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Fam98cE9PYD1 344 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Gm21783J3QM57 227 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Brs3O54798 399 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Arrdc1Q99KN1 434 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Cds2Q99L43 444 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Mrps16Q9CPX7 135 aaKnown RBP8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Olfr951Q9EQ94 314 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Olfr954Q9EQB6 314 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Fgf20Q9ESL9 211 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Mex3aG3UYU0 520 aaKnown RBP8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 P01641 117 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Wnt1P04426 370 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 P06334 169 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 JPT1P97825 154 aaKnown RBP8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Olfr322Q5NCC8 327 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Trav6-2Q5R1I4 113 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Foxc2Q61850 494 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Cbln2Q8BGU2 224 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 LiphQ8CIV3 451 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Olfr816Q8VFU2 312 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Cox6cQ9CPQ1 76 aa8.3□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Zfp831A2ADM8 1628 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Fignl2J3QK54 644 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Hoxa3P02831 443 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 PtcraP0C6B2 199 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Tpsb2P21845 276 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 P2ry1P49650 373 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Cd55Q61475 390 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Cbln4Q8BME9 198 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Map1lc3aQ91VR7 121 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 SdhbQ9CQA3 282 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Togaram1Q6A070 1776 aaKnown RBP8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Iqcf6G3UWF2 157 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Ttc6G3UYY4 1857 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Prss12O08762 761 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 PpiaP17742 164 aaKnown RBP8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Taar5Q5QD14 337 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Prss58Q8BW11 241 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Dock10Q8BZN6 2150 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Spns3Q9D232 514 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Fbxo25Q9D2Y6 357 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 V1ra8Q9EQ48 279 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Tcrg-V4A0A0B4J1J8 138 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Klk1b1P00755 261 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Hoxa6P09092 232 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Rag2P21784 527 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 TigitP86176 249 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Paqr9Q6TCG2 375 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Olfr1181Q7TR18 311 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Olfr702Q920Z2 318 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Psg20E9Q9B4 475 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Itln1O88310 313 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Gsx2P31316 305 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Tmem170bP86050 132 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Lrrc52Q5M8M9 314 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Cdk2ap2Q9CPY4 127 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Cnn3Q9DAW9 330 aaKnown RBP8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Chst5Q9QUP4 395 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Col3a1P08121 1464 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Gm28557A0A087WQQ0 336 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 BC025446A0A087WQT1 134 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Gm14399A2ARW8 610 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Fam170bE9PXT9 378 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Hoxd11P23813 323 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Polr2gP62488 172 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Fbxw18Q3TSA9 469 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Zdhhc8Q5Y5T5 762 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Reep5Q60870 185 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Rtp2Q80ZI2 223 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Rnps1Q99M28 305 aaKnown RBP8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Sval2Q99N75 144 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Atoh7Q9Z2E5 149 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Gbf1Q6DFZ1 1861 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 FusP56959 518 aaKnown RBP8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Scrt2Q8BTH6 311 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Timd2Q8R183 305 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Chchd4Q8VEA4 139 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Tmub1Q9JMG3 245 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 CtszQ9WUU7 306 aa8.29□□□□□ -1.08
Col6a5-201ENSMUST00000165165 BC053393A0A0B4J1F6 192 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Scgb2a2J3KMP9 96 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Fpr2O88536 351 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Rac3P60764 192 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Mfsd4b3Q3UN21 355 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Rtl4Q3URY0 304 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Asphd2Q80VP9 343 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Fbxl14Q8BID8 400 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Olfr1002Q8VFK2 318 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Derl1Q99J56 251 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Foxj2Q9ES18 565 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Plekhb1Q9QYE9 243 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Marf1Q8BJ34 1730 aaKnown RBP8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Ighv4-1A0A075B5R5 116 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Gng4P50153 75 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Rasl12Q08AT1 266 aa8.28□□□□□ -1.08
Col6a5-201ENSMUST00000165165 Olfr324Q5NCC7 333 aa8.28□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms