RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Pom121l12A0A1B0GSJ4 278 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Olfr243E9PV96 316 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Rarres1F6ZIS7 283 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Gm21118J3QPK8 227 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Ascl5M0QWB7 188 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 GrprP21729 384 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 C5ar1P30993 351 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Bdkrb2P32299 392 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Foxa3P35584 353 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Aldh3a2P47740 484 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 SelenopP70274 380 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Gm813Q3UWK9 176 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Gm20909Q5FWB5 227 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Gm20852Q5M8R5 227 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Gm20917Q62457 227 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Gm20809Q62458 227 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Gm20865Q62460 227 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Olfr875Q7TRE5 310 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Kctd9Q80UN1 339 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Gm20738Q810R8 227 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Tmprss11fQ8BHM9 439 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Smim4Q8C1Q6 80 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Gm20806Q9D9T3 227 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Fbln5Q9WVH9 448 aa17.66■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Gm17677B3GLJ5 116 aa17.65■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Wnt2bO70283 389 aa17.65■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Cks2P56390 79 aa17.65■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Tpsab1Q02844 273 aa17.65■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Ssbp4Q3U4B1 363 aa17.65■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Zfp936Q3ULA8 456 aa17.65■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Slc17a5Q8BN82 495 aa17.65■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Rnf113a1Q8R3P8 341 aa17.65■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Mic13Q8R404 119 aaKnown RBP17.65■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Olfr1280Q8VGG8 305 aa17.65■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Rnf151Q9CQ29 239 aa17.65■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 PipoxQ9D826 390 aa17.65■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Enpp5Q9EQG7 477 aa17.65■□□□□ 0.42
Ccdc88a-202ENSMUST00000109477 Rhox3gB9EJQ9 160 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr248E9Q1L6 309 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Rdh16O54909 317 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Ca11O70354 328 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 P01630 113 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 FauP35545 74 aaKnown RBP17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Tcl1b2P56841 117 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Defb18Q30KP5 85 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Esp1Q3LHH8 102 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Zfp799Q8BHK4 648 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Asb13Q8VBX0 278 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Kcnmb2Q9CZM9 235 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Wdr20Q9D5R2 567 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Cldn10Q9Z0S6 231 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Ldlrad3A2AR95 345 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 A930017K11RikE0CXQ2 571 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Edn3P48299 214 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Kcnj8P97794 424 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 BaxQ07813 192 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Slc7a15Q50E62 488 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Znf436Q8BPP0 452 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr530Q8VFE8 307 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr134Q8VG95 312 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr770Q8VGC2 311 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 OcstampQ9D611 498 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Ing5Q9D8Y8 240 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Naa60Q9DBU2 242 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Map1aQ9QYR6 2776 aa17.64■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 TncQ80YX1 2110 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Rhox7aA2A4F1 281 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr1098A2AVB0 315 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr102B2RT33 308 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Gm4884E9PVP9 694 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Iqcf6G3UWF2 157 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Gm6882J3KMT3 313 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Mesp2O08574 370 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 MyadmO35682 320 aaKnown RBP17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 P01783 136 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr143P34985 313 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Gpr55Q3UJF0 327 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Gm10662Q3UT86 313 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Lyg2Q3V1I0 213 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Taar3Q5QD16 343 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Plk3Q60806 631 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Spin2cQ6NVE3 257 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Olfr859Q7TRF5 309 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Tmem246Q91YV9 403 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 B3galnt1Q920V1 331 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Klk1b27Q9JM71 263 aa17.63■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Gm21117A0A087WPJ9 222 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Gm20937A0A087WQA3 222 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Gm21258A0A087WQC7 222 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Gm11009F7CWA7 138 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 PrkacaP05132 351 aaKnown RBP17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Tnfrsf1aP25118 454 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 S100a3P62818 101 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Neurog3P70661 214 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Rab42Q0PD08 215 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Vmn1r15Q14C10 299 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Ccdc190Q3URK1 288 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Pea15Q62048 130 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 LaynQ8C351 381 aa17.62■□□□□ 0.41
Ccdc88a-202ENSMUST00000109477 Ssxb2Q8C5Z3 165 aa17.62■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms