RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Ypel1Q9ESC7 118 aa9.71□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Polg2Q9QZM2 459 aa9.71□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Fhl3Q9R059 289 aa9.71□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Pkd1l1Q8R526 2615 aa9.71□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Sorl1O88307 2215 aaKnown RBP9.71□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Olfr1458A0A1L1SSD5 307 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Hacd4A2AKM2 232 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Rd3lB2RV38 197 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Vmn1r68E9Q0V3 319 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Ly86O88188 162 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 NppaP05125 152 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Cd28P31041 218 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Adra2aQ01338 450 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Dio1Q61153 257 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Fblim1Q71FD7 375 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Ppp1r3cQ7TMB3 317 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Mob3aQ8BSU7 217 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 CebpzosQ8BTE5 80 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Tmem212Q8C6V3 187 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Gm26566Q8CAC1 153 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Olfr164Q8VF87 315 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Olfr123Q8VFQ1 309 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Tmprss11dQ8VHK8 417 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 PsenenQ9CQR7 101 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Rab3bQ9CZT8 219 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Cnn3Q9DAW9 330 aaKnown RBP9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Ube2j1Q9JJZ4 318 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Ccl24Q9JKC0 119 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Esm1Q9QYY7 184 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Htr6Q9R1C8 440 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Bex1Q9R224 128 aa9.7□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Gm21149A0A0G2JFY7 255 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 A0A286YDU1 74 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 AsmtD3KU66 387 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Dnah10D3YYQ8 4591 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Nr1h5E9Q5A6 505 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Speer4eK7N6S8 255 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Tmem95P0DJF3 176 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 RelP15307 587 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Srp14P16254 110 aaKnown RBP9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 BsgP18572 389 aaKnown RBP9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Egr3P43300 387 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Sesn1P58006 492 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 S100a5P63084 93 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Ube2d2bQ6ZWY6 147 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Olfr153Q7TR48 307 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Olfr1042Q7TR81 313 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Fbxw26Q8BI58 466 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Ankrd55Q8BLD6 626 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Ldlrad4Q8BWJ4 306 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Txnl1Q8CDN6 289 aaKnown RBP9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Hspa12aQ8K0U4 675 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Degs2Q8R2F2 323 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 D6Wsu163eQ91YN0 552 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Taf11Q99JX1 211 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Tmem189Q99LQ7 271 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Raet1eQ9CZQ6 251 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Stra6lQ9DBN1 621 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Ropn1lQ9EQ00 218 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 GlrxQ9QUH0 107 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Syt6Q9R0N8 511 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Opn3Q9WUK7 400 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Gm26992S4R1A3 76 aa9.69□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 VwfQ8CIZ8 2813 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Ighv6-5A0A0A6YWS9 119 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Igkv4-57A0A0A6YYE7 117 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 1700025C18RikA2A580 89 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Gm20695H3BLK7 282 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Gm10665K7N6B7 321 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Rpl27aP14115 148 aaKnown RBP9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Tnfrsf1aP25118 454 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Psmd7P26516 321 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 PpoxP51175 477 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Slc38a11Q3USY0 453 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Lcn10Q810Z1 182 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Kctd7Q8BJK1 289 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Spock3Q8BKV0 436 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Znf146Q8BQN6 292 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Slc22a29Q8BWG6 551 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Arfrp1Q8BXL7 201 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Rnf170Q8CBG9 286 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Olfr1170Q8VFG1 316 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Slc35b3Q922Q5 369 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Cst11Q9D269 139 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Ptges3lQ9D9A7 131 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Hmg20aQ9DC33 346 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Irak1bp1Q9ESJ7 259 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Fgf16Q9ESL8 207 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Tmem37Q9JJV3 211 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Anxa10Q9QZ10 324 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Syt7Q9R0N7 403 aa9.68□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Dnah6E9Q0B6 4144 aa9.67□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Ighv6-6A0A075B5T3 119 aa9.67□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Ighv1-7A0A075B5T7 117 aa9.67□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Gm28897A0A087WP44 222 aa9.67□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Gm28961A0A087WPA5 222 aa9.67□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Gm20820A0A087WPP3 222 aa9.67□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Gm21858A0A087WQ24 222 aa9.67□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Gm28102A0A087WQL3 222 aa9.67□□□□□ -0.86
Ccdc28a-202ENSMUST00000080860 Gm21488A0A087WR99 222 aa9.67□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 73.1 ms