RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SSX2Q16385 188 aa14.12□□□□□ -0.15
PHGDH-232ENST00000641947 STX12Q86Y82 276 aa14.12□□□□□ -0.15
PHGDH-232ENST00000641947 THNSL2Q86YJ6 484 aa14.12□□□□□ -0.15
PHGDH-232ENST00000641947 KRTAP1-3Q8IUG1 177 aa14.12□□□□□ -0.15
PHGDH-232ENST00000641947 TMEM167AQ8TBQ9 72 aa14.12□□□□□ -0.15
PHGDH-232ENST00000641947 TMEM170AQ8WVE7 144 aa14.12□□□□□ -0.15
PHGDH-232ENST00000641947 TMED6Q8WW62 240 aa14.12□□□□□ -0.15
PHGDH-232ENST00000641947 PHYHIPLQ96FC7 376 aa14.12□□□□□ -0.15
PHGDH-232ENST00000641947 PRNDQ9UKY0 176 aa14.12□□□□□ -0.15
PHGDH-232ENST00000641947 UNC79Q9P2D8 2635 aa14.12□□□□□ -0.15
PHGDH-232ENST00000641947 TEX50A0A1B0GTY4 177 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 C15orf62A8K5M9 175 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 E7EUB6 86 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 ATP6V1G1O75348 118 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 JTBO76095 146 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 CRYGBP07316 175 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 MSMBP08118 114 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 CD24P25063 80 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 CEACAM3P40198 252 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 MAPK1IP1LQ8NDC0 245 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 RFNGQ9Y644 331 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 CENPVL3A0A0U1RRI6 287 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 CGB1A6NKQ9 187 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 NMBP08949 121 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 CLLU1Q5K131 121 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 C10orf55Q5SWW7 151 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 MINOS1Q5TGZ0 78 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 STPG2Q8N412 459 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 PIP4P2Q8N4L2 257 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 CIB3Q96Q77 187 aaPredicted RBP14.11□□□□□ -0.15
PHGDH-232ENST00000641947 AIFM2Q9BRQ8 373 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 ZNF430Q9H8G1 570 aaPredicted RBP14.11□□□□□ -0.15
PHGDH-232ENST00000641947 MINOS1-NBL1R4GNA1 71 aa14.11□□□□□ -0.15
PHGDH-232ENST00000641947 A0A1B0GW64 132 aa14.1□□□□□ -0.15
PHGDH-232ENST00000641947 SAA4P35542 130 aa14.1□□□□□ -0.15
PHGDH-232ENST00000641947 LGALS7P47929 136 aa14.1□□□□□ -0.15
PHGDH-232ENST00000641947 RPL8P62917 257 aaKnown RBP14.1□□□□□ -0.15
PHGDH-232ENST00000641947 PSG5Q15238 335 aa14.1□□□□□ -0.15
PHGDH-232ENST00000641947 Q5PR19 223 aa14.1□□□□□ -0.15
PHGDH-232ENST00000641947 OR8G2PQ6IF36 304 aa14.1□□□□□ -0.15
PHGDH-232ENST00000641947 LRRC75A-AS1Q8N1F1 130 aa14.1□□□□□ -0.15
PHGDH-232ENST00000641947 OR1S2Q8NGQ3 325 aa14.1□□□□□ -0.15
PHGDH-232ENST00000641947 C1orf159Q96HA4 380 aa14.1□□□□□ -0.15
PHGDH-232ENST00000641947 SH3BGRL3Q9H299 93 aa14.1□□□□□ -0.15
PHGDH-232ENST00000641947 ZNF257Q9Y2Q1 563 aa14.1□□□□□ -0.15
PHGDH-232ENST00000641947 STRAPQ9Y3F4 350 aaKnown RBP14.1□□□□□ -0.15
PHGDH-232ENST00000641947 IGKV1D-33P01593 117 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 IGKV1-33P01594 117 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 CD1BP29016 333 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 HOXA1P49639 335 aaPredicted RBP14.09□□□□□ -0.15
PHGDH-232ENST00000641947 PRCDQ00LT1 54 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 VMA21Q3ZAQ7 101 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 RUSC1-AS1Q66K80 236 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 OR4A5Q8NH83 315 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 ATP5SQ99766 215 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 GINS3Q9BRX5 216 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 HINT2Q9BX68 163 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 ITPR3Q14573 2671 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 IGHV3OR16-10A0A075B7F0 116 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 RRHO14718 337 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 FBXO24O75426 580 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 FGF2P09038 288 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 F2RL1P55085 397 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 LGALS4P56470 323 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 HSD17B11Q8NBQ5 300 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 OR10W1Q8NGF6 305 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 VSTM2AQ8TAG5 236 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 CXorf58Q96LI9 332 aa14.09□□□□□ -0.15
PHGDH-232ENST00000641947 HEYLQ9NQ87 328 aaPredicted RBP14.09□□□□□ -0.15
PHGDH-232ENST00000641947 TBL2Q9Y4P3 447 aaKnown RBP14.09□□□□□ -0.15
PHGDH-232ENST00000641947 BORCS7-ASMTA0A0B4J1R7 106 aa14.08□□□□□ -0.16
PHGDH-232ENST00000641947 RNF223E7ERA6 249 aa14.08□□□□□ -0.16
PHGDH-232ENST00000641947 NPFFO15130 113 aa14.08□□□□□ -0.16
PHGDH-232ENST00000641947 MBD6Q96DN6 1003 aa14.08□□□□□ -0.16
PHGDH-232ENST00000641947 NDUFA4L2Q9NRX3 87 aa14.08□□□□□ -0.16
PHGDH-232ENST00000641947 FASNP49327 2511 aaKnown RBP14.08□□□□□ -0.16
PHGDH-232ENST00000641947 TEX15Q9BXT5 2789 aa14.07□□□□□ -0.16
PHGDH-232ENST00000641947 PRRC2AP48634 2157 aaKnown RBP14.07□□□□□ -0.16
PHGDH-232ENST00000641947 B4DSR2 109 aa14.07□□□□□ -0.16
PHGDH-232ENST00000641947 SNRNP70P08621 437 aaKnown RBP14.07□□□□□ -0.16
PHGDH-232ENST00000641947 FAM157CP0CG43 387 aa14.07□□□□□ -0.16
PHGDH-232ENST00000641947 SSBP2P81877 361 aaPredicted RBP14.07□□□□□ -0.16
PHGDH-232ENST00000641947 SLC38A11Q08AI6 406 aa14.07□□□□□ -0.16
PHGDH-232ENST00000641947 HNF4GQ14541 408 aa14.07□□□□□ -0.16
PHGDH-232ENST00000641947 TEX45Q8NA69 505 aa14.07□□□□□ -0.16
PHGDH-232ENST00000641947 OR5B3Q8NH48 314 aa14.07□□□□□ -0.16
PHGDH-232ENST00000641947 EAF1Q96JC9 268 aaPredicted RBP14.07□□□□□ -0.16
PHGDH-232ENST00000641947 FBXL15Q9H469 300 aa14.07□□□□□ -0.16
PHGDH-232ENST00000641947 HIF1ANQ9NWT6 349 aa14.07□□□□□ -0.16
PHGDH-232ENST00000641947 SIGLEC9Q9Y336 463 aa14.07□□□□□ -0.16
PHGDH-232ENST00000641947 TRAV40A0A0B4J280 105 aa14.06□□□□□ -0.16
PHGDH-232ENST00000641947 OOSP1A8MZH6 123 aa14.06□□□□□ -0.16
PHGDH-232ENST00000641947 PRSS46E5RG02 174 aa14.06□□□□□ -0.16
PHGDH-232ENST00000641947 AVPP01185 164 aa14.06□□□□□ -0.16
PHGDH-232ENST00000641947 IGHV4-38-2P0DP08 117 aa14.06□□□□□ -0.16
PHGDH-232ENST00000641947 RUNX1Q01196 453 aa14.06□□□□□ -0.16
PHGDH-232ENST00000641947 ZNF266Q14584 549 aa14.06□□□□□ -0.16
PHGDH-232ENST00000641947 PRSS8Q16651 343 aa14.06□□□□□ -0.16
PHGDH-232ENST00000641947 NDUFA5Q16718 116 aa14.06□□□□□ -0.16
PHGDH-232ENST00000641947 TSNAXQ99598 290 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms