RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	MBD3L3	A6NE82	208 aa	Predicted RBP	13.83	□□□□□ -0.2
PHGDH-223	ENST00000641597	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.83	□□□□□ -0.2
PHGDH-223	ENST00000641597	PPP5D1	E7EU14	171 aa		13.83	□□□□□ -0.2
PHGDH-223	ENST00000641597	ZZEF1	O43149	2961 aa		13.83	□□□□□ -0.2
PHGDH-223	ENST00000641597	IGKV1-16	P04430	117 aa		13.83	□□□□□ -0.2
PHGDH-223	ENST00000641597	ERVK-16	P61578	105 aa		13.83	□□□□□ -0.2
PHGDH-223	ENST00000641597	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.83	□□□□□ -0.2
PHGDH-223	ENST00000641597	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.83	□□□□□ -0.2
PHGDH-223	ENST00000641597	OR5B12	Q96R08	314 aa		13.83	□□□□□ -0.2
PHGDH-223	ENST00000641597	PYGO2	Q9BRQ0	406 aa		13.83	□□□□□ -0.2
PHGDH-223	ENST00000641597	GCM1	Q9NP62	436 aa		13.83	□□□□□ -0.2
PHGDH-223	ENST00000641597	DMRT1	Q9Y5R6	373 aa		13.83	□□□□□ -0.2
PHGDH-223	ENST00000641597	SCO2	A0A1W2PP80	73 aa		13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	F2RL2	O00254	374 aa		13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	NDUFS6	O75380	124 aa	Known RBP	13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	HRAS	P01112	189 aa		13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	LHB	P01229	141 aa		13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	CGB3	P0DN86	165 aa		13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	CGB7	P0DN87	165 aa		13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	MLANA	Q16655	118 aa		13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	TCTEX1D1	Q8N7M0	179 aa		13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	XKRY2	A2RUG3	117 aa		13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	TM4SF5	O14894	197 aa		13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	AMBP	P02760	352 aa		13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	GATA2	P23769	480 aa	Predicted RBP	13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	THBS3	P49746	956 aa		13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	RND1	Q92730	232 aa		13.82	□□□□□ -0.2
PHGDH-223	ENST00000641597	ACTL6B	O94805	426 aa		13.81	□□□□□ -0.2
PHGDH-223	ENST00000641597	CCL8	P80075	99 aa		13.81	□□□□□ -0.2
PHGDH-223	ENST00000641597	CA2	P00918	260 aa		13.81	□□□□□ -0.2
PHGDH-223	ENST00000641597	DIRC2	Q96SL1	478 aa		13.81	□□□□□ -0.2
PHGDH-223	ENST00000641597	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	SRRM4	A7MD48	611 aa	Known RBP	13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	HIST1H1B	P16401	226 aa	Known RBP	13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	PAX5	Q02548	391 aa		13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	AARD	Q4LEZ3	155 aa		13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	ZADH2	Q8N4Q0	377 aa		13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	OR2T10	Q8NGZ9	312 aa		13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	IGHV1-46	P01743	117 aa		13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	GLRX	P35754	106 aa		13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	CR1L	Q2VPA4	569 aa		13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	TRAT1	Q6PIZ9	186 aa		13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	SH3BGRL2	Q9UJC5	107 aa		13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	PITPNC1	Q9UKF7	332 aa		13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	ABCA1	O95477	2261 aa		13.8	□□□□□ -0.2
PHGDH-223	ENST00000641597	KBTBD11-OT1	A0A1B0GTJ5	212 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	IL6R	P08887	468 aa	Predicted RBP	13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	IGFBP2	P18065	325 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	IL3RA	P26951	378 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	NUBP1	P53384	320 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	MRPS11	P82912	194 aa	Known RBP	13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	TIMM23B	Q5SRD1	257 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	STPG3	Q8N7X2	389 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	OR1P1	Q8NH06	330 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	IDI2-AS1	Q9NZ38	188 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	SVEP1	Q4LDE5	3571 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	C15orf61	A6NNL5	157 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	FRMD6-AS1	P0C7T7	363 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	OPRK1	P41145	380 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	TNFAIP6	P98066	277 aa	Predicted RBP	13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	ASPHD1	Q5U4P2	390 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	TMEM183A	Q8IXX5	376 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	NBAS	A2RRP1	2371 aa		13.79	□□□□□ -0.2
PHGDH-223	ENST00000641597	SLC24A4	Q8NFF2	622 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	OR4S2	Q8NH73	311 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	PPP1R35	Q8TAP8	253 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	GAFA1	Q96PS6	74 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	LSM4	Q9Y4Z0	139 aa	Known RBP	13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	MUC6	Q6W4X9	2439 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	TLN1	Q9Y490	2541 aa	Known RBP	13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	STAG3L2	P0CL84	134 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	STAG3L3	P0CL85	134 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	CFHR2	P36980	270 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	REG1B	P48304	166 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	EFNB3	Q15768	340 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	ZNF729	A6NN14	1252 aa	Predicted RBP	13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	NPY1R	P25929	384 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	CCKAR	P32238	428 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	HLA-DRB5	Q30154	266 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	OR10W1	Q8NGF6	305 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	OCC1	Q8TAD7	63 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	FAM216A	Q8WUB2	273 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	TUBG2	Q9NRH3	451 aa		13.78	□□□□□ -0.2
PHGDH-223	ENST00000641597	IGLV3-9	A0A075B6K5	115 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	IGKV1OR2-108	A0A075B7D4	117 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	ZNF320	A2RRD8	509 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	SLC17A3	O00476	420 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	TMPRSS2	O15393	492 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	GGCT	O75223	188 aa	Known RBP	13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	FCN3	O75636	299 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	CEACAM4	O75871	244 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	STUM	Q69YW2	141 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	MIR17HG	Q75NE6	70 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	RNF7	Q9UBF6	113 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	NUPR1	O60356	82 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	IGHV3-48	P01763	117 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	GZMB	P10144	247 aa		13.77	□□□□□ -0.21
PHGDH-223	ENST00000641597	MZT1	Q08AG7	82 aa		13.77	□□□□□ -0.21

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