RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 TMEM222Q9H0R3 208 aa7.83□□□□□ -1.16
PHGDH-222ENST00000641587 MED28Q9H204 178 aa7.83□□□□□ -1.16
PHGDH-222ENST00000641587 ZFP57Q9NU63 452 aa7.83□□□□□ -1.16
PHGDH-222ENST00000641587 WASHC3Q9Y3C0 194 aa7.83□□□□□ -1.16
PHGDH-222ENST00000641587 OOSP1A8MZH6 123 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 SEC14L6B5MCN3 397 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 H0YJW9 148 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 CRYZL1O95825 349 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 IGKV1D-33P01593 117 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 IGKV1-33P01594 117 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 IGHG2P01859 326 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 RRASP10301 218 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 RPA2P15927 270 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 UCP1P25874 307 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 AKR1C2P52895 323 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 TMEM187Q14656 261 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 C9orf66Q5T8R8 295 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 TMEM268Q5VZI3 342 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 TCTEX1D1Q8N7M0 179 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 CD300LFQ8TDQ1 290 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 GLYATL2Q8WU03 294 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 MITD1Q8WV92 249 aa7.82□□□□□ -1.16
PHGDH-222ENST00000641587 A0A0B4J2A0 478 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 PIGBOS1A0A0B4J2F0 54 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 FAM25EA8MYX2 175 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 GOSR2O14653 212 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 SHOXO15266 292 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 RBFOX2O43251 390 aaKnown RBP eCLIP7.81□□□□□ -1.167e-8■■□□□ 12.4
PHGDH-222ENST00000641587 ATG12O94817 140 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 S1PR2O95136 353 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 IFNA21P01568 189 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 HOXB5P09067 269 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 MC5RP33032 325 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 ERVK-16P61578 105 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 RPS16P62249 146 aaKnown RBP7.81□□□□□ -1.16
PHGDH-222ENST00000641587 SLC35B1P78383 322 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 TAGLNQ01995 201 aaKnown RBP7.81□□□□□ -1.16
PHGDH-222ENST00000641587 THNSL2Q86YJ6 484 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 PDPNQ86YL7 162 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 SBSPONQ8IVN8 264 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 SELENOHQ8IZQ5 122 aaKnown RBP7.81□□□□□ -1.16
PHGDH-222ENST00000641587 OR5AN1Q8NGI8 311 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 OR5M8Q8NGP6 311 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 DDB2Q92466 427 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 RBPMSQ93062 196 aaKnown RBP7.81□□□□□ -1.16
PHGDH-222ENST00000641587 HARBI1Q96MB7 349 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 RCHY1Q96PM5 261 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 MGAT4CQ9UBM8 478 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 ZMAT5Q9UDW3 170 aaKnown RBP7.81□□□□□ -1.16
PHGDH-222ENST00000641587 SHPKQ9UHJ6 478 aa7.81□□□□□ -1.16
PHGDH-222ENST00000641587 C13orf42A0A1B0GVH6 325 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 C5orf51A6NDU8 294 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 CCSO14618 274 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 FGF16O43320 207 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 LY86O95711 162 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 HPRT1P00492 218 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 KRASP01116 189 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 IGKV1-16P04430 117 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 RRAS2P62070 204 aaPredicted RBP7.8□□□□□ -1.16
PHGDH-222ENST00000641587 ZNF585BQ52M93 769 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 SSX9Q7RTT3 188 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 LYZL2Q7Z4W2 148 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 FOXRED2Q8IWF2 684 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 CADM3Q8N126 398 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 COMMD1Q8N668 190 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 SLC35G3Q8N808 338 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 DMBX1Q8NFW5 382 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 LHFPL5Q8TAF8 219 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 IL22RA2Q969J5 263 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 FLYWCH2Q96CP2 140 aaKnown RBP7.8□□□□□ -1.16
PHGDH-222ENST00000641587 RRNAD1Q96FB5 475 aaKnown RBP7.8□□□□□ -1.16
PHGDH-222ENST00000641587 FAM212BQ9NTI7 297 aaPredicted RBP7.8□□□□□ -1.16
PHGDH-222ENST00000641587 COMMD9Q9P000 198 aa7.8□□□□□ -1.16
PHGDH-222ENST00000641587 ZNF256Q9Y2P7 627 aaPredicted RBP7.8□□□□□ -1.16
PHGDH-222ENST00000641587 SORL1Q92673 2214 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 LCE6AA0A183 80 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 ADAP1O75689 374 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 CDS2O95674 445 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 HRASP01112 189 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 NQO2P16083 231 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 CD1BP29016 333 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 G6PCP35575 357 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 BCAP31P51572 246 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 BRWD1-AS2P59051 145 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 FCN2Q15485 313 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 CXorf66Q5JRM2 361 aaPredicted RBP7.79□□□□□ -1.16
PHGDH-222ENST00000641587 ASPHD1Q5U4P2 390 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 GGNBP1Q5YKI7 109 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 ZFAND6Q6FIF0 208 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 THOC7Q6I9Y2 204 aaKnown RBP7.79□□□□□ -1.16
PHGDH-222ENST00000641587 TEX38Q6PEX7 206 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 GSG1LQ6UXU4 331 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 H2BFWTQ7Z2G1 175 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 LRTM2Q8N967 370 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 Q8N9W7 124 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 TMEM56Q96MV1 263 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 HSPB9Q9BQS6 159 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 PDCD10Q9BUL8 212 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 PLEKHA2Q9HB19 425 aa7.79□□□□□ -1.16
PHGDH-222ENST00000641587 TMEM56-RWDD3S4R434 201 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms