RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 OR51H1Q8NH63 302 aa10.51□□□□□ -0.73
LINC00339-211ENST00000641009 CACNG8Q8WXS5 425 aa10.51□□□□□ -0.73
LINC00339-211ENST00000641009 ISOC1Q96CN7 298 aa10.51□□□□□ -0.73
LINC00339-211ENST00000641009 NEURL2Q9BR09 285 aa10.51□□□□□ -0.73
LINC00339-211ENST00000641009 RBFOX2O43251 390 aaKnown RBP eCLIP10.5□□□□□ -0.73
LINC00339-211ENST00000641009 XRCC3O43542 346 aa10.5□□□□□ -0.73
LINC00339-211ENST00000641009 DHFRP00374 187 aa10.5□□□□□ -0.73
LINC00339-211ENST00000641009 DEFA4P12838 97 aa10.5□□□□□ -0.73
LINC00339-211ENST00000641009 ARL3P36405 182 aa10.5□□□□□ -0.73
LINC00339-211ENST00000641009 CBX5P45973 191 aa10.5□□□□□ -0.73
LINC00339-211ENST00000641009 TAS2R31P59538 309 aa10.5□□□□□ -0.73
LINC00339-211ENST00000641009 OR4A5Q8NH83 315 aa10.5□□□□□ -0.73
LINC00339-211ENST00000641009 GIMAP1Q8WWP7 306 aa10.5□□□□□ -0.73
LINC00339-211ENST00000641009 EEF1AKMT3Q96AZ1 226 aa10.5□□□□□ -0.73
LINC00339-211ENST00000641009 AIFM2Q9BRQ8 373 aa10.5□□□□□ -0.73
LINC00339-211ENST00000641009 WFDC10AQ9H1F0 79 aa10.5□□□□□ -0.73
LINC00339-211ENST00000641009 RETNQ9HD89 108 aa10.5□□□□□ -0.73
LINC00339-211ENST00000641009 IFT46Q9NQC8 304 aa10.5□□□□□ -0.73
LINC00339-211ENST00000641009 IGLV11-55A0A075B6I3 123 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 MFSD2BA6NFX1 497 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 LGALS9O00182 355 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 TPPPO94811 219 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 S1PR2O95136 353 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 HPRT1P00492 218 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 RPA2P15927 270 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 NQO2P16083 231 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 RPS19P39019 145 aaKnown RBP10.49□□□□□ -0.73
LINC00339-211ENST00000641009 OR2B8PP59922 312 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 LSM3P62310 102 aaKnown RBP10.49□□□□□ -0.73
LINC00339-211ENST00000641009 GUCA2BQ16661 112 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 GPHB5Q86YW7 130 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 LAX1Q8IWV1 398 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 DEFB125Q8N687 156 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 WDR89Q96FK6 387 aaPredicted RBP10.49□□□□□ -0.73
LINC00339-211ENST00000641009 S100A16Q96FQ6 103 aaKnown RBP10.49□□□□□ -0.73
LINC00339-211ENST00000641009 ZC4H2Q9NQZ6 224 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 SLC2A8Q9NY64 477 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 EHFQ9NZC4 300 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 CEPT1Q9Y6K0 416 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 DNAH1Q9P2D7 4330 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 IGLC7A0M8Q6 106 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 ZNF320A2RRD8 509 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 UPK2O00526 184 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 TMEM127O75204 238 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 HIST1H1BP16401 226 aaKnown RBP10.49□□□□□ -0.73
LINC00339-211ENST00000641009 CBLN1P23435 193 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 GNRHRP30968 328 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 RFX2P48378 723 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 HERV-K104P61576 105 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 POU2AF1Q16633 256 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 KLK9Q2XQG4 91 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 UBE2NLQ5JXB2 153 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 AADACL3Q5VUY0 350 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 LINC00322Q6ZN03 302 aaPredicted RBP10.49□□□□□ -0.73
LINC00339-211ENST00000641009 SAMD12Q8N8I0 201 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 DMBX1Q8NFW5 382 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 TMEM140Q9NV12 185 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 KLK9Q9UKQ9 250 aa10.49□□□□□ -0.73
LINC00339-211ENST00000641009 TMEM213A2RRL7 107 aa10.48□□□□□ -0.73
LINC00339-211ENST00000641009 RBMY1BA6NDE4 496 aaKnown RBP10.48□□□□□ -0.73
LINC00339-211ENST00000641009 RBMY1EA6NEQ0 496 aaKnown RBP10.48□□□□□ -0.73
LINC00339-211ENST00000641009 OR11H12B2RN74 326 aa10.48□□□□□ -0.73
LINC00339-211ENST00000641009 PMP2P02689 132 aa10.48□□□□□ -0.73
LINC00339-211ENST00000641009 IFNA6P05013 189 aa10.48□□□□□ -0.73
LINC00339-211ENST00000641009 RBMY1DP0C7P1 496 aaKnown RBP10.48□□□□□ -0.73
LINC00339-211ENST00000641009 TAS2R20P59543 309 aa10.48□□□□□ -0.73
LINC00339-211ENST00000641009 TMEM69Q5SWH9 247 aa10.48□□□□□ -0.73
LINC00339-211ENST00000641009 CROCCP3Q8IVE0 287 aa10.48□□□□□ -0.73
LINC00339-211ENST00000641009 OR10W1Q8NGF6 305 aa10.48□□□□□ -0.73
LINC00339-211ENST00000641009 YIPF6Q96EC8 236 aa10.48□□□□□ -0.73
LINC00339-211ENST00000641009 FAM110AQ9BQ89 295 aa10.48□□□□□ -0.73
LINC00339-211ENST00000641009 ZNF2Q9BSG1 426 aaPredicted RBP10.48□□□□□ -0.73
LINC00339-211ENST00000641009 COMMD5Q9GZQ3 224 aa10.48□□□□□ -0.73
LINC00339-211ENST00000641009 PLEKHA2Q9HB19 425 aa10.48□□□□□ -0.73
LINC00339-211ENST00000641009 TECRQ9NZ01 308 aaKnown RBP10.48□□□□□ -0.73
LINC00339-211ENST00000641009 TRBV7-1A0A0A6YYK4 115 aa10.47□□□□□ -0.73
LINC00339-211ENST00000641009 RLN1P04808 185 aa10.47□□□□□ -0.73
LINC00339-211ENST00000641009 CLEC3BP05452 202 aa10.47□□□□□ -0.73
LINC00339-211ENST00000641009 FAM106AQ4KMX7 169 aa10.47□□□□□ -0.73
LINC00339-211ENST00000641009 DHRS11Q6UWP2 260 aa10.47□□□□□ -0.73
LINC00339-211ENST00000641009 TMEM61Q8N0U2 210 aa10.47□□□□□ -0.73
LINC00339-211ENST00000641009 CD300LFQ8TDQ1 290 aa10.47□□□□□ -0.73
LINC00339-211ENST00000641009 MOB3AQ96BX8 217 aa10.47□□□□□ -0.73
LINC00339-211ENST00000641009 CXorf58Q96LI9 332 aa10.47□□□□□ -0.73
LINC00339-211ENST00000641009 QTRT1Q9BXR0 403 aaKnown RBP10.47□□□□□ -0.73
LINC00339-211ENST00000641009 HIPK2Q9H2X6 1198 aa10.47□□□□□ -0.73
LINC00339-211ENST00000641009 SRD5A3Q9H8P0 318 aa10.47□□□□□ -0.73
LINC00339-211ENST00000641009 MLXQ9UH92 298 aa10.47□□□□□ -0.73
LINC00339-211ENST00000641009 ANAPC10Q9UM13 185 aa10.47□□□□□ -0.73
LINC00339-211ENST00000641009 IGHV3-35A0A0C4DH35 117 aa10.46□□□□□ -0.74
LINC00339-211ENST00000641009 A8MWP6 167 aa10.46□□□□□ -0.74
LINC00339-211ENST00000641009 PGLYRP1O75594 196 aaPredicted RBP10.46□□□□□ -0.74
LINC00339-211ENST00000641009 GPR183P32249 361 aa10.46□□□□□ -0.74
LINC00339-211ENST00000641009 TM4SF20Q53R12 229 aa10.46□□□□□ -0.74
LINC00339-211ENST00000641009 ZNF57Q68EA5 555 aaPredicted RBP10.46□□□□□ -0.74
LINC00339-211ENST00000641009 UNQ9165/PRO28630Q6UXU0 137 aa10.46□□□□□ -0.74
LINC00339-211ENST00000641009 UXS1Q8NBZ7 420 aa10.46□□□□□ -0.74
LINC00339-211ENST00000641009 ZNF502Q8TBZ5 544 aa10.46□□□□□ -0.74
LINC00339-211ENST00000641009 COMMD9Q9P000 198 aa10.46□□□□□ -0.74
LINC00339-211ENST00000641009 LCE6AA0A183 80 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms