RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 SSBP2P81877 361 aaPredicted RBP11.96□□□□□ -0.49
PAX6-268ENST00000640287 C10orf99Q6UWK7 81 aa11.96□□□□□ -0.49
PAX6-268ENST00000640287 SELENOHQ8IZQ5 122 aaKnown RBP11.96□□□□□ -0.49
PAX6-268ENST00000640287 LGI3Q8N145 548 aa11.96□□□□□ -0.49
PAX6-268ENST00000640287 LHFPL5Q8TAF8 219 aa11.96□□□□□ -0.49
PAX6-268ENST00000640287 FYTTD1Q96QD9 318 aaKnown RBP11.96□□□□□ -0.49
PAX6-268ENST00000640287 ZNF747Q9BV97 191 aa11.96□□□□□ -0.49
PAX6-268ENST00000640287 NUBP2Q9Y5Y2 271 aa11.96□□□□□ -0.49
PAX6-268ENST00000640287 A0A1W2PN81 502 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 H2AFB2P0C5Z0 115 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 OR4E1P0C645 316 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 OR9G9P0C7N8 305 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 EGR2P11161 476 aaPredicted RBP11.95□□□□□ -0.5
PAX6-268ENST00000640287 MYOD1P15172 320 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 CHRNA7P36544 502 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 KRTAP10-3P60369 221 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 KHDC1LQ5JSQ8 128 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 TEX38Q6PEX7 206 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 NRARPQ7Z6K4 114 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 TMEM56Q96MV1 263 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 SPIN2AQ99865 258 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 SPIN2BQ9BPZ2 258 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 ZNF580Q9UK33 172 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 PRNDQ9UKY0 176 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 OR51B2Q9Y5P1 312 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 TMEM56-RWDD3S4R434 201 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 STAB1Q9NY15 2570 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 PIGBOS1A0A0B4J2F0 54 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 IL6RP08887 468 aaPredicted RBP11.95□□□□□ -0.5
PAX6-268ENST00000640287 CD28P10747 220 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 DHRS2Q13268 280 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 IZUMO4Q1ZYL8 232 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 SHISA2Q6UWI4 295 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 SLC35G3Q8N808 338 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 IL22RA2Q969J5 263 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 HINT2Q9BX68 163 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 FKBP11Q9NYL4 201 aa11.95□□□□□ -0.5
PAX6-268ENST00000640287 PLXNB1O43157 2135 aa11.94□□□□□ -0.5
PAX6-268ENST00000640287 C9orf170A2RU37 121 aa11.94□□□□□ -0.5
PAX6-268ENST00000640287 C15orf61A6NNL5 157 aa11.94□□□□□ -0.5
PAX6-268ENST00000640287 AKIRIN2Q53H80 203 aa11.94□□□□□ -0.5
PAX6-268ENST00000640287 HIST2H2BDQ6DRA6 164 aa11.94□□□□□ -0.5
PAX6-268ENST00000640287 TMEM65Q6PI78 240 aa11.94□□□□□ -0.5
PAX6-268ENST00000640287 PLET1Q6UQ28 207 aa11.94□□□□□ -0.5
PAX6-268ENST00000640287 LYG2Q86SG7 212 aa11.94□□□□□ -0.5
PAX6-268ENST00000640287 CADM3Q8N126 398 aa11.94□□□□□ -0.5
PAX6-268ENST00000640287 COMMD1Q8N668 190 aa11.94□□□□□ -0.5
PAX6-268ENST00000640287 SPATA3Q8NHX4 192 aa11.94□□□□□ -0.5
PAX6-268ENST00000640287 TMEM68Q96MH6 324 aa11.94□□□□□ -0.5
PAX6-268ENST00000640287 ZNF355PQ9NSJ1 428 aa11.94□□□□□ -0.5
PAX6-268ENST00000640287 FOXA2Q9Y261 457 aaPredicted RBP11.94□□□□□ -0.5
PAX6-268ENST00000640287 A0A0B4J2A0 478 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 TCRBV4S1A1TA0A5B7 111 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 HMX3A6NHT5 357 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 FGF2P09038 288 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 PF4V1P10720 104 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 CRIP2P52943 208 aaPredicted RBP11.93□□□□□ -0.5
PAX6-268ENST00000640287 CFHR3Q02985 330 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 ANKRD55Q3KP44 614 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 CXorf66Q5JRM2 361 aaPredicted RBP11.93□□□□□ -0.5
PAX6-268ENST00000640287 LYZL2Q7Z4W2 148 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 FAM219AQ8IW50 185 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 OR5T1Q8NG75 326 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 OR1L8Q8NGR8 309 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 COQ8AQ8NI60 647 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 WIPF2Q8TF74 440 aaPredicted RBP11.93□□□□□ -0.5
PAX6-268ENST00000640287 CITED1Q99966 193 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 PDCD10Q9BUL8 212 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 QTRT1Q9BXR0 403 aaKnown RBP11.93□□□□□ -0.5
PAX6-268ENST00000640287 PALMDQ9NP74 551 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 SHPKQ9UHJ6 478 aa11.93□□□□□ -0.5
PAX6-268ENST00000640287 A0A0G2JRQ6 117 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 TEX50A0A1B0GTY4 177 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 DBX1A6NMT0 343 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 E7EUB6 86 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 IGHG4P01861 327 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 PPIFP30405 207 aaKnown RBP11.92□□□□□ -0.5
PAX6-268ENST00000640287 MECP2P51608 486 aaKnown RBP11.92□□□□□ -0.5
PAX6-268ENST00000640287 FOXE3Q13461 319 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 DCTN2Q13561 401 aaKnown RBP11.92□□□□□ -0.5
PAX6-268ENST00000640287 LCNL1Q6ZST4 164 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 MINDY2Q8NBR6 621 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 DUSP18Q8NEJ0 188 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 OR52B4Q8NGK2 314 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 OR5M8Q8NGP6 311 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 OR5B3Q8NH48 314 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 LSM10Q969L4 123 aaKnown RBP11.92□□□□□ -0.5
PAX6-268ENST00000640287 CITED2Q99967 270 aaPredicted RBP11.92□□□□□ -0.5
PAX6-268ENST00000640287 ALX4Q9H161 411 aaPredicted RBP11.92□□□□□ -0.5
PAX6-268ENST00000640287 TMEM14BQ9NUH8 114 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 COA4Q9NYJ1 87 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 CACNG5Q9UF02 275 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 ANK2Q01484 3957 aa11.92□□□□□ -0.5
PAX6-268ENST00000640287 A0A0B4J293 547 aa11.91□□□□□ -0.5
PAX6-268ENST00000640287 A0A1W2PRX2 142 aa11.91□□□□□ -0.5
PAX6-268ENST00000640287 TEX22C9J3V5 150 aa11.91□□□□□ -0.5
PAX6-268ENST00000640287 DUS4LO95620 317 aaKnown RBP11.91□□□□□ -0.5
PAX6-268ENST00000640287 ELANEP08246 267 aa11.91□□□□□ -0.5
PAX6-268ENST00000640287 P0C879 139 aa11.91□□□□□ -0.5
PAX6-268ENST00000640287 TRAPPC2P0DI81 140 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms