RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 FXYD6Q9H0Q3 95 aa6.47□□□□□ -1.37
SCARB2-220ENST00000640076 VSIG4Q9Y279 399 aa6.47□□□□□ -1.37
SCARB2-220ENST00000640076 TSSC4Q9Y5U2 329 aaPredicted RBP6.47□□□□□ -1.37
SCARB2-220ENST00000640076 CSPG4Q6UVK1 2322 aa6.47□□□□□ -1.37
SCARB2-220ENST00000640076 CR1P17927 2039 aa6.47□□□□□ -1.37
SCARB2-220ENST00000640076 IGHV2-70DA0A0C4DH43 119 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 FAM172BPA6NC97 362 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 ARPC1BO15143 372 aaKnown RBP6.46□□□□□ -1.37
SCARB2-220ENST00000640076 SERPINE2P07093 398 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 IGHV1-8P0DP01 117 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 NKX2-5P52952 324 aaPredicted RBP6.46□□□□□ -1.37
SCARB2-220ENST00000640076 RAB25P57735 213 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 LOXL1Q08397 574 aaPredicted RBP6.46□□□□□ -1.37
SCARB2-220ENST00000640076 BAMBIQ13145 260 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 SURF2Q15527 256 aaPredicted RBP6.46□□□□□ -1.37
SCARB2-220ENST00000640076 SLC9A3R2Q15599 337 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 GUK1Q16774 197 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 LCE2AQ5TA79 106 aaPredicted RBP6.46□□□□□ -1.37
SCARB2-220ENST00000640076 TMEM65Q6PI78 240 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 Q6ZNX1 250 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 ZDHHC22Q8N966 263 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 LEAP2Q969E1 77 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 Q96MF0 132 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 REG4Q9BYZ8 158 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 MMP26Q9NRE1 261 aa6.46□□□□□ -1.37
SCARB2-220ENST00000640076 ACANP16112 2415 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 INMT-MINDY4F8WBC2 141 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 RNASEK-C17orf49H0YIS7 233 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 M0R1W7 72 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 NUPL2O15504 423 aaKnown RBP6.46□□□□□ -1.38
SCARB2-220ENST00000640076 IGHV3-7P01780 117 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 OR8U9P0C7N5 309 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 PGAM2P15259 253 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 PI3P19957 117 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 GNRHRP30968 328 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 RAG2P55895 527 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 TAS2R60P59551 318 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 FOXL1Q12952 345 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 LY6G6FQ5SQ64 297 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 UQCC3Q6UW78 93 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 ZNF562Q6V9R5 426 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 KIR3DL3Q8N743 410 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 Q8N7P7 452 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 ZNF439Q8NDP4 499 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 OR2AK2Q8NG84 335 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 OR8U1Q8NH10 309 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 SECTM1Q8WVN6 248 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 SCGB3A2Q96PL1 93 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 AGMATQ9BSE5 352 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 RTBDNQ9BSG5 229 aaPredicted RBP6.46□□□□□ -1.38
SCARB2-220ENST00000640076 SUCNR1Q9BXA5 334 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 C5orf66Q9H5L9 145 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 GSN-AS1Q9NRJ2 163 aa6.46□□□□□ -1.38
SCARB2-220ENST00000640076 LINC00587B1AMM8 73 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 H0YIZ8 118 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 SLC31A2O15432 143 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 NBR2O15453 112 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 CTSDP07339 412 aaPredicted RBP6.45□□□□□ -1.38
SCARB2-220ENST00000640076 MSMBP08118 114 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 DLX1P56177 255 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 TMEM249Q2WGJ8 235 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 CT45A1Q5HYN5 189 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 LPCAT3Q6P1A2 487 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 IL17RELQ6ZVW7 336 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 TMED4Q7Z7H5 227 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 NECAP1Q8NC96 275 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 WFDC11Q8NEX6 87 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 CT45A3Q8NHU0 189 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 C22orf15Q8WYQ4 148 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 TMEM133Q9H2Q1 129 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 CCL28Q9NRJ3 127 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 SERTAD4Q9NUC0 356 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 PSG11Q9UQ72 335 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 RBM7Q9Y580 266 aaKnown RBP6.45□□□□□ -1.38
SCARB2-220ENST00000640076 CELSR1Q9NYQ6 3014 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 ZNF469Q96JG9 3925 aaPredicted RBP6.45□□□□□ -1.38
SCARB2-220ENST00000640076 TEX15Q9BXT5 2789 aa6.45□□□□□ -1.38
SCARB2-220ENST00000640076 B4DSR2 109 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 RAB29O14966 203 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 IGLV2-14P01704 120 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 PRTN3P24158 256 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 CD34P28906 385 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 DVL1P1P54792 670 aaPredicted RBP6.44□□□□□ -1.38
SCARB2-220ENST00000640076 PNRC1Q12796 327 aaPredicted RBP6.44□□□□□ -1.38
SCARB2-220ENST00000640076 CYB5R2Q6BCY4 276 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 BTNL3Q6UXE8 466 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 SLC25A48Q6ZT89 311 aaKnown RBP6.44□□□□□ -1.38
SCARB2-220ENST00000640076 C8orf31Q8N9H6 132 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 ADAD2Q8NCV1 583 aaKnown RBP6.44□□□□□ -1.38
SCARB2-220ENST00000640076 MAPK1IP1LQ8NDC0 245 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 OR2D3Q8NGH3 330 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 ZFAND1Q8TCF1 268 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 TMEM230Q96A57 120 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 PINX1Q96BK5 328 aaKnown RBP6.44□□□□□ -1.38
SCARB2-220ENST00000640076 ZNF486Q96H40 463 aaPredicted RBP6.44□□□□□ -1.38
SCARB2-220ENST00000640076 BEX2Q9BXY8 128 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 ALX4Q9H161 411 aaPredicted RBP6.44□□□□□ -1.38
SCARB2-220ENST00000640076 OR2D2Q9H210 308 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 IFI27L2Q9H2X8 130 aa6.44□□□□□ -1.38
SCARB2-220ENST00000640076 SLA2Q9H6Q3 261 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms