RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 TMEM170AQ8WVE7 144 aa9.9□□□□□ -0.82
CACNA1D-228ENST00000638120 RPEQ96AT9 228 aa9.9□□□□□ -0.82
CACNA1D-228ENST00000638120 CCL19Q99731 98 aa9.9□□□□□ -0.82
CACNA1D-228ENST00000638120 PLEKHA3Q9HB20 300 aa9.9□□□□□ -0.82
CACNA1D-228ENST00000638120 SIRT7Q9NRC8 400 aa9.9□□□□□ -0.82
CACNA1D-228ENST00000638120 TIMM9Q9Y5J7 89 aa9.9□□□□□ -0.82
CACNA1D-228ENST00000638120 IGHV3-72A0A0B4J1Y9 119 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 TEX50A0A1B0GTY4 177 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 AGPAT2O15120 278 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 MDKP21741 143 aaPredicted RBP9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 NPY1RP25929 384 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 ZFP36P26651 326 aaKnown RBP9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 SNCAP37840 140 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 LGALS7P47929 136 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 RAB11AP62491 216 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 RPL8P62917 257 aaKnown RBP9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 AKR1C1Q04828 323 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 VMA21Q3ZAQ7 101 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 ETV3LQ6ZN32 361 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 NARS2Q96I59 477 aaKnown RBP9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 GGACTQ9BVM4 153 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 HINT2Q9BX68 163 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 INSIG2Q9Y5U4 225 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 FLNCQ14315 2725 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 TMEM218A2RU14 115 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 ODF3BA8MYP8 253 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 FGF7P21781 194 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 PDLIM4P50479 330 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 PAX2Q02962 417 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 HCP5Q6MZN7 132 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 LFNGQ8NES3 379 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 CLDND2Q8NHS1 167 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 UNKLQ9H9P5 680 aaKnown RBP9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 TREM1Q9NP99 234 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 KPTNQ9Y664 436 aa9.89□□□□□ -0.83
CACNA1D-228ENST00000638120 ZNF462Q96JM2 2506 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 A0A1W2PPI3 338 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 SLC25A17O43808 307 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 CA2P00918 260 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 CD5P06127 495 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 H2AFB1P0C5Y9 115 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 HTR1DP28221 377 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 LMO4P61968 165 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 DLK1P80370 383 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 KLRD1Q13241 179 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 LDLRAD2Q5SZI1 272 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 TPTE2P1Q5T6R2 138 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 SPSB3Q6PJ21 355 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 MOB3BQ86TA1 216 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 OR1L8Q8NGR8 309 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 COMMD5Q9GZQ3 224 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 TMEM231Q9H6L2 316 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 NDUFA4L2Q9NRX3 87 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 RPRMQ9NS64 109 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 WDR83OSQ9Y284 106 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 FAM96BQ9Y3D0 163 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 ARHGAP32A7KAX9 2087 aa9.88□□□□□ -0.83
CACNA1D-228ENST00000638120 IGHV2-70DA0A0C4DH43 119 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 BTBD17A6NE02 478 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 INS-IGF2F8WCM5 200 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 OPN1MWP04001 364 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 IFNA4P05014 189 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 OPN1MW2P0DN77 364 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 OPN1MW3P0DN78 364 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 CD1BP29016 333 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 DVL1P1P54792 670 aaPredicted RBP9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 LCN2P80188 198 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 SRSF1Q07955 248 aaKnown RBP eCLIP9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 BSXQ3C1V8 233 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 SP5Q6BEB4 398 aaPredicted RBP9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 TEX45Q8NA69 505 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 RITA1Q96K30 269 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 SCRT1Q9BWW7 348 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 NPCDR1Q9BY65 106 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 VSIRQ9H7M9 311 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 ZNF430Q9H8G1 570 aaPredicted RBP9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 DPM3Q9P2X0 92 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 EPG5Q9HCE0 2579 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 TNCP24821 2201 aa9.87□□□□□ -0.83
CACNA1D-228ENST00000638120 RNASEK-C17orf49H0YIS7 233 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 ADCYAP1P18509 176 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 CEACAM3P40198 252 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 ATP5IP56385 69 aaPredicted RBP9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 MRGPRG-AS1Q2M3A8 158 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 TMEM41BQ5BJD5 291 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 VMO1Q7Z5L0 202 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 SIRPDQ9H106 197 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 TPSG1Q9NRR2 321 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 MYO18BQ8IUG5 2567 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 A0A1W2PN81 502 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 MPDU1O75352 247 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 HBE1P02100 147 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 CRYGBP07316 175 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 CHRNA7P36544 502 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 ELLP55199 621 aaPredicted RBP9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 SPTAN1Q13813 2472 aaKnown RBP9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 GUK1Q16774 197 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 C2orf83Q53S99 150 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 ACSM6Q6P461 480 aa9.86□□□□□ -0.83
CACNA1D-228ENST00000638120 COL12A1Q99715 3063 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms