RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 PLAUP00749 431 aa17.57■□□□□ 0.4
CLN6-224ENST00000638076 CA7P43166 264 aa17.57■□□□□ 0.4
CLN6-224ENST00000638076 CDC34P49427 236 aaPredicted RBP17.57■□□□□ 0.4
CLN6-224ENST00000638076 PSMB3P49720 205 aa17.57■□□□□ 0.4
CLN6-224ENST00000638076 GCSAMLQ5JQS6 135 aa17.57■□□□□ 0.4
CLN6-224ENST00000638076 NDUFA2O43678 99 aa17.56■□□□□ 0.4
CLN6-224ENST00000638076 IL6RP08887 468 aaPredicted RBP17.56■□□□□ 0.4
CLN6-224ENST00000638076 NPY1RP25929 384 aa17.56■□□□□ 0.4
CLN6-224ENST00000638076 GATAD1Q8WUU5 269 aa17.56■□□□□ 0.4
CLN6-224ENST00000638076 MRPL20Q9BYC9 149 aaKnown RBP17.56■□□□□ 0.4
CLN6-224ENST00000638076 PRNDQ9UKY0 176 aa17.56■□□□□ 0.4
CLN6-224ENST00000638076 MAS1LP35410 378 aa17.56■□□□□ 0.4
CLN6-224ENST00000638076 EFNB3Q15768 340 aa17.56■□□□□ 0.4
CLN6-224ENST00000638076 MGST2Q99735 147 aa17.56■□□□□ 0.4
CLN6-224ENST00000638076 IGHV1-69-2A0A0G2JMI3 117 aa17.55■□□□□ 0.4
CLN6-224ENST00000638076 B9A039 149 aa17.55■□□□□ 0.4
CLN6-224ENST00000638076 UPK2O00526 184 aa17.55■□□□□ 0.4
CLN6-224ENST00000638076 AGAP20933 346 aa17.55■□□□□ 0.4
CLN6-224ENST00000638076 CTAG1AP78358 180 aa17.55■□□□□ 0.4
CLN6-224ENST00000638076 MANBALQ9NQG1 85 aa17.55■□□□□ 0.4
CLN6-224ENST00000638076 J3QR06 171 aa17.55■□□□□ 0.4
CLN6-224ENST00000638076 CA2P00918 260 aa17.55■□□□□ 0.4
CLN6-224ENST00000638076 OPN1MWP04001 364 aa17.55■□□□□ 0.4
CLN6-224ENST00000638076 OPN1MW2P0DN77 364 aa17.55■□□□□ 0.4
CLN6-224ENST00000638076 OPN1MW3P0DN78 364 aa17.55■□□□□ 0.4
CLN6-224ENST00000638076 GRNP28799 593 aaKnown RBP17.55■□□□□ 0.4
CLN6-224ENST00000638076 OPRK1P41145 380 aa17.55■□□□□ 0.4
CLN6-224ENST00000638076 PNRC1Q12796 327 aaPredicted RBP17.55■□□□□ 0.4
CLN6-224ENST00000638076 WDR25Q64LD2 544 aaPredicted RBP17.55■□□□□ 0.4
CLN6-224ENST00000638076 KLF2Q9Y5W3 355 aaPredicted RBP17.55■□□□□ 0.4
CLN6-224ENST00000638076 B4DEV8 164 aa17.54■□□□□ 0.4
CLN6-224ENST00000638076 LOXP28300 417 aaPredicted RBP17.54■□□□□ 0.4
CLN6-224ENST00000638076 GGTLC1Q9BX51 225 aa17.54■□□□□ 0.4
CLN6-224ENST00000638076 SDF2L1Q9HCN8 221 aa17.54■□□□□ 0.4
CLN6-224ENST00000638076 NPVFQ9HCQ7 196 aa17.54■□□□□ 0.4
CLN6-224ENST00000638076 SIRT7Q9NRC8 400 aa17.54■□□□□ 0.4
CLN6-224ENST00000638076 KAAG1Q9UBP8 84 aa17.54■□□□□ 0.4
CLN6-224ENST00000638076 POLEQ07864 2286 aa17.54■□□□□ 0.4
CLN6-224ENST00000638076 SEC14L6B5MCN3 397 aa17.54■□□□□ 0.4
CLN6-224ENST00000638076 CCL21O00585 134 aa17.54■□□□□ 0.4
CLN6-224ENST00000638076 REG1BP48304 166 aa17.54■□□□□ 0.4
CLN6-224ENST00000638076 ARSJQ5FYB0 599 aaPredicted RBP17.54■□□□□ 0.4
CLN6-224ENST00000638076 ZNF343Q6P1L6 599 aa17.54■□□□□ 0.4
CLN6-224ENST00000638076 PATZ1Q9HBE1 687 aaKnown RBP17.54■□□□□ 0.4
CLN6-224ENST00000638076 ZNF257Q9Y2Q1 563 aa17.54■□□□□ 0.4
CLN6-224ENST00000638076 SOX15O60248 233 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 KBTBD11O94819 623 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 YIF1AO95070 293 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 APOA2P02652 100 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 SAA1P0DJI8 122 aaPredicted RBP17.53■□□□□ 0.4
CLN6-224ENST00000638076 KLRB1Q12918 225 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 OR10X1Q8NGY0 326 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 MALSU1Q96EH3 234 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 C1orf159Q96HA4 380 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 PLEKHA3Q9HB20 300 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 URGCP-MRPS24S4R325 110 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 CHRNB4P30926 498 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 AKR1D1P51857 326 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 PRCDQ00LT1 54 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 ELOBQ15370 118 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 MIC13Q5XKP0 118 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 BET1LQ9NYM9 111 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 LSM4Q9Y4Z0 139 aaKnown RBP17.53■□□□□ 0.4
CLN6-224ENST00000638076 PXMP4Q9Y6I8 212 aa17.53■□□□□ 0.4
CLN6-224ENST00000638076 ARFGEF3Q5TH69 2177 aa17.52■□□□□ 0.4
CLN6-224ENST00000638076 A0A1W2PPV4 95 aa17.52■□□□□ 0.4
CLN6-224ENST00000638076 CXorf65A6NEN9 183 aa17.52■□□□□ 0.4
CLN6-224ENST00000638076 H0YJW9 148 aa17.52■□□□□ 0.4
CLN6-224ENST00000638076 PAGE4O60829 102 aa17.52■□□□□ 0.4
CLN6-224ENST00000638076 ZNF674Q2M3X9 581 aa17.52■□□□□ 0.4
CLN6-224ENST00000638076 OR4F5Q8NH21 305 aa17.52■□□□□ 0.4
CLN6-224ENST00000638076 OSR1Q8TAX0 266 aaPredicted RBP17.52■□□□□ 0.4
CLN6-224ENST00000638076 HARBI1Q96MB7 349 aa17.52■□□□□ 0.4
CLN6-224ENST00000638076 OR4F4Q96R69 305 aa17.52■□□□□ 0.4
CLN6-224ENST00000638076 SMIM7Q9BQ49 75 aa17.52■□□□□ 0.4
CLN6-224ENST00000638076 FBXL19-AS1Q494R0 122 aa17.52■□□□□ 0.39
CLN6-224ENST00000638076 ST6GALNAC3Q8NDV1 305 aa17.52■□□□□ 0.39
CLN6-224ENST00000638076 Q8WTZ3 238 aa17.52■□□□□ 0.39
CLN6-224ENST00000638076 RAB1CQ92928 201 aa17.52■□□□□ 0.39
CLN6-224ENST00000638076 TEX50A0A1B0GTY4 177 aa17.51■□□□□ 0.39
CLN6-224ENST00000638076 TMEM250H0YL14 139 aa17.51■□□□□ 0.39
CLN6-224ENST00000638076 RPL35P42766 123 aaKnown RBP17.51■□□□□ 0.39
CLN6-224ENST00000638076 DLX6P56179 175 aa17.51■□□□□ 0.39
CLN6-224ENST00000638076 SNRPEP62304 92 aaKnown RBP17.51■□□□□ 0.39
CLN6-224ENST00000638076 OR5AN1Q8NGI8 311 aa17.51■□□□□ 0.39
CLN6-224ENST00000638076 RPUSD4Q96CM3 377 aaKnown RBP17.51■□□□□ 0.39
CLN6-224ENST00000638076 RELNP78509 3460 aa17.51■□□□□ 0.39
CLN6-224ENST00000638076 SIAH2O43255 324 aa17.5■□□□□ 0.39
CLN6-224ENST00000638076 DIAPH2-AS1Q14236 149 aa17.5■□□□□ 0.39
CLN6-224ENST00000638076 TEPPQ6URK8 271 aa17.5■□□□□ 0.39
CLN6-224ENST00000638076 SSMEM1Q8WWF3 244 aa17.5■□□□□ 0.39
CLN6-224ENST00000638076 TMEM155Q4W5P6 130 aa17.5■□□□□ 0.39
CLN6-224ENST00000638076 MUC15Q8N387 334 aa17.5■□□□□ 0.39
CLN6-224ENST00000638076 LINC00311Q8N616 119 aa17.5■□□□□ 0.39
CLN6-224ENST00000638076 FKBP11Q9NYL4 201 aa17.5■□□□□ 0.39
CLN6-224ENST00000638076 LYNX1G3V0Z9 82 aa17.49■□□□□ 0.39
CLN6-224ENST00000638076 S100A6P06703 90 aa17.49■□□□□ 0.39
CLN6-224ENST00000638076 CXCL1P09341 107 aa17.49■□□□□ 0.39
CLN6-224ENST00000638076 LYNX1P0DP58 116 aa17.49■□□□□ 0.39
CLN6-224ENST00000638076 ZNF596Q8TC21 504 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms