RNA–Protein interactions for RNA: ENST00000637110.1

CLN3-257, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 565 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-257ENST00000637110 FBXL7Q9UJT9 491 aa8.92□□□□□ -0.98
CLN3-257ENST00000637110 ANAPC10Q9UM13 185 aa8.92□□□□□ -0.98
CLN3-257ENST00000637110 GPR31O00270 319 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 RGS5O15539 181 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 RBFOX2O43251 390 aaKnown RBP eCLIP8.91□□□□□ -0.98
CLN3-257ENST00000637110 S1PR2O95136 353 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 TRBV12-3P01733 135 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 IFNA6P05013 189 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 REG1AP05451 166 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 IL6RP08887 468 aaPredicted RBP8.91□□□□□ -0.98
CLN3-257ENST00000637110 LPAR6P43657 344 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 ZNF45Q02386 682 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 PHLDA2Q53GA4 152 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 LPCAT3Q6P1A2 487 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 CLVS1Q8IUQ0 354 aaPredicted RBP8.91□□□□□ -0.98
CLN3-257ENST00000637110 NECAP1Q8NC96 275 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 OR9G4Q8NGQ1 327 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 ASCL2Q99929 193 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 SLC2A9Q9NRM0 540 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 TMEM140Q9NV12 185 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 ZNF257Q9Y2Q1 563 aa8.91□□□□□ -0.98
CLN3-257ENST00000637110 TRAV3A0A0B4J244 114 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 TEX22C9J3V5 150 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 E7EUB6 86 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 UPK2O00526 184 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 NOL3O60936 208 aaKnown RBP8.9□□□□□ -0.98
CLN3-257ENST00000637110 RBMXL2O75526 392 aaKnown RBP8.9□□□□□ -0.98
CLN3-257ENST00000637110 IGHV3-23P01764 117 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 ZNF735P0CB33 412 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 GP9P14770 177 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 AREGP15514 252 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 F2RP25116 425 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 PSMB6P28072 239 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 KLF5Q13887 457 aaPredicted RBP8.9□□□□□ -0.98
CLN3-257ENST00000637110 C15orf32Q32M92 178 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 C19orf35Q6ZS72 473 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 DGCR14Q96DF8 476 aaKnown RBP8.9□□□□□ -0.98
CLN3-257ENST00000637110 HINT2Q9BX68 163 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 FXYD6Q9H0Q3 95 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 PLEKHA2Q9HB19 425 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 COMMD9Q9P000 198 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 LSM4Q9Y4Z0 139 aaKnown RBP8.9□□□□□ -0.98
CLN3-257ENST00000637110 SMAD5-AS1Q9Y6J3 95 aa8.9□□□□□ -0.98
CLN3-257ENST00000637110 TRBV9A0A0B4J1U6 114 aa8.89□□□□□ -0.99
CLN3-257ENST00000637110 NPIPB5A8MRT5 1133 aa8.89□□□□□ -0.99
CLN3-257ENST00000637110 M0QYG6 137 aa8.89□□□□□ -0.99
CLN3-257ENST00000637110 SNAPC5O75971 98 aa8.89□□□□□ -0.99
CLN3-257ENST00000637110 KRASP01116 189 aa8.89□□□□□ -0.99
CLN3-257ENST00000637110 PGAM2P15259 253 aa8.89□□□□□ -0.99
CLN3-257ENST00000637110 HIST1H1BP16401 226 aaKnown RBP8.89□□□□□ -0.99
CLN3-257ENST00000637110 ALDH3B2P48448 385 aa8.89□□□□□ -0.99
CLN3-257ENST00000637110 RNASE10Q5GAN6 216 aaKnown RBP8.89□□□□□ -0.99
CLN3-257ENST00000637110 RCHY1Q96PM5 261 aa8.89□□□□□ -0.99
CLN3-257ENST00000637110 PEMTQ9UBM1 199 aa8.89□□□□□ -0.99
CLN3-257ENST00000637110 ADAM30Q9UKF2 790 aa8.89□□□□□ -0.99
CLN3-257ENST00000637110 S4R3C0 116 aa8.89□□□□□ -0.99
CLN3-257ENST00000637110 SORL1Q92673 2214 aa8.89□□□□□ -0.99
CLN3-257ENST00000637110 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.88□□□□□ -0.99
CLN3-257ENST00000637110 MARCH11A6NNE9 402 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 PPP5D1E7EU14 171 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 NDUFB8O95169 186 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 G6PCP35575 357 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 MECP2P51608 486 aaKnown RBP8.88□□□□□ -0.99
CLN3-257ENST00000637110 OR2B8PP59922 312 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 SPCS2Q15005 226 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 FAM209BQ5JX69 171 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 CLEC19AQ6UXS0 136 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 TBC1D26Q86UD7 250 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 SLC38A6Q8IZM9 456 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 OR52I2Q8NH67 350 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 C15orf40Q8WUR7 153 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 FCAMRQ8WWV6 532 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 EEF1AKMT3Q96AZ1 226 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 KLK11Q9UBX7 282 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 NSG2Q9Y328 171 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 CSMD3Q7Z407 3707 aa8.88□□□□□ -0.99
CLN3-257ENST00000637110 A0A1B0GW64 132 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 H0Y980 276 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 BMPR1BO00238 502 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 CYB5BO43169 146 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 GGCTO75223 188 aaKnown RBP8.87□□□□□ -0.99
CLN3-257ENST00000637110 CRYGCP07315 174 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 TRAPPC2P0DI81 140 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 TRAPPC2BP0DI82 140 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 CTRB1P17538 263 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 ARL3P36405 182 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 POU2AF1Q16633 256 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 ZFAND6Q6FIF0 208 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 CTRB2Q6GPI1 263 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 OR1L8Q8NGR8 309 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 DYNLRB2Q8TF09 96 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 QTRT1Q9BXR0 403 aaKnown RBP8.87□□□□□ -0.99
CLN3-257ENST00000637110 THYN1Q9P016 225 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 OR51B2Q9Y5P1 312 aa8.87□□□□□ -0.99
CLN3-257ENST00000637110 TEX50A0A1B0GTY4 177 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 ZNF320A2RRD8 509 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 CGB1A6NKQ9 187 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 CTDSP2O14595 271 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 JTBO76095 146 aa8.86□□□□□ -0.99
CLN3-257ENST00000637110 OR2C1O95371 312 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms