RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816		E7EUB6	86 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	LY6L	H3BQJ8	138 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	TRIM77	I1YAP6	450 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	MOB3B	Q86TA1	216 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	TMEM147	Q9BVK8	224 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	INSIG2	Q9Y5U4	225 aa		12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	KLF2	Q9Y5W3	355 aa	Predicted RBP	12.81	□□□□□ -0.36
CACNA1A-231	ENST00000636816	UMAD1	C9J7I0	102 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	TSPAN15	O95858	294 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	OR8U8	P0C7N1	319 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	CNTFR	P26992	372 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	MC5R	P33032	325 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	LMO4	P61968	165 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	CCL20	P78556	96 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	ATP6V1F	Q16864	119 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	ETV3L	Q6ZN32	361 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	OR10W1	Q8NGF6	305 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	CLDND2	Q8NHS1	167 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	SUN5	Q8TC36	379 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	PINX1	Q96BK5	328 aa	Known RBP	12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	CCL19	Q99731	98 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	SPOCK3	Q9BQ16	436 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	AIFM2	Q9BRQ8	373 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	TPSG1	Q9NRR2	321 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	UQCC1	Q9NVA1	299 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	NUDT19	A8MXV4	375 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	PRSS46	E5RG02	174 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816		M0R1W7	72 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	SLC25A17	O43808	307 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	PRCD	Q00LT1	54 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	AKR1C8P	Q5T2L2	129 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	UQCC3	Q6UW78	93 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	PARD6G	Q9BYG4	376 aa	Predicted RBP	12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	TREM1	Q9NP99	234 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	RPRM	Q9NS64	109 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816	ZNF257	Q9Y2Q1	563 aa		12.8	□□□□□ -0.36
CACNA1A-231	ENST00000636816		C9JQL5	133 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	CA2	P00918	260 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	FGF7	P21781	194 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	PRTN3	P24158	256 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	SNCA	P37840	140 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	RAB13	P51153	203 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	PAX2	Q02962	417 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	MRGPRG-AS1	Q2M3A8	158 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	VWC2	Q2TAL6	325 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	SPSB3	Q6PJ21	355 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	LHFPL4	Q7Z7J7	247 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	OR11H6	Q8NGC7	330 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	TMEM167A	Q8TBQ9	72 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	NRGN	Q92686	78 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	RPE	Q96AT9	228 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	SCRT1	Q9BWW7	348 aa		12.79	□□□□□ -0.36
CACNA1A-231	ENST00000636816	TMEM218	A2RU14	115 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	CGB1	A6NKQ9	187 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	RNASEK-C17orf49	H0YIS7	233 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	MDK	P21741	143 aa	Predicted RBP	12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	ELL	P55199	621 aa	Predicted RBP	12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	RPL8	P62917	257 aa	Known RBP	12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	RPP30	P78346	268 aa	Known RBP	12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	C10orf55	Q5SWW7	151 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	PSMG3	Q9BT73	122 aa	Predicted RBP	12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	ZNF430	Q9H8G1	570 aa	Predicted RBP	12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	ENY2	Q9NPA8	101 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	HILPDA	Q9Y5L2	63 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	SPG11	Q96JI7	2443 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816		A0A1W2PPI3	338 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816		A1L4Q6	167 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	EIF3G	O75821	320 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	LY86	O95711	162 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	IFNA4	P05014	189 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	ADCYAP1	P18509	176 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	NPY1R	P25929	384 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	VMO1	Q7Z5L0	202 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	SLC24A4	Q8NFF2	622 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	PLEKHA3	Q9HB20	300 aa		12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	UBR5	O95071	2799 aa	Predicted RBP	12.78	□□□□□ -0.36
CACNA1A-231	ENST00000636816	CRYBG3	Q68DQ2	2970 aa		12.77	□□□□□ -0.36
CACNA1A-231	ENST00000636816		A0A1B0GW64	132 aa		12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	GOSR1	O95249	250 aa		12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	APOC3	P02656	99 aa		12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	H2AFB1	P0C5Y9	115 aa		12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	USF1	P22415	310 aa	Predicted RBP	12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	HTR1D	P28221	377 aa		12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	CD1B	P29016	333 aa		12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	ZNF726P1	Q15940	193 aa		12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	TPTE2P1	Q5T6R2	138 aa		12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	ACSM6	Q6P461	480 aa		12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	SSX7	Q7RTT5	188 aa		12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	C17orf50	Q8WW18	174 aa		12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	COMMD5	Q9GZQ3	224 aa		12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	NDUFA4L2	Q9NRX3	87 aa		12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	FKBP11	Q9NYL4	201 aa		12.77	□□□□□ -0.37
CACNA1A-231	ENST00000636816	IGKV1D-33	P01593	117 aa		12.76	□□□□□ -0.37
CACNA1A-231	ENST00000636816	IGKV1-33	P01594	117 aa		12.76	□□□□□ -0.37
CACNA1A-231	ENST00000636816	CD5	P06127	495 aa		12.76	□□□□□ -0.37
CACNA1A-231	ENST00000636816	PDLIM4	P50479	330 aa		12.76	□□□□□ -0.37
CACNA1A-231	ENST00000636816	SP5	Q6BEB4	398 aa	Predicted RBP	12.76	□□□□□ -0.37
CACNA1A-231	ENST00000636816	CENPV	Q7Z7K6	275 aa	Predicted RBP	12.76	□□□□□ -0.37
CACNA1A-231	ENST00000636816	OR5B3	Q8NH48	314 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms