RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 CADM3Q8N126 398 aa12.09□□□□□ -0.47
CLN6-211ENST00000635754 SEC22AQ96IW7 307 aa12.09□□□□□ -0.47
CLN6-211ENST00000635754 SLC25A21Q9BQT8 299 aaPredicted RBP12.09□□□□□ -0.47
CLN6-211ENST00000635754 COMMD5Q9GZQ3 224 aa12.09□□□□□ -0.47
CLN6-211ENST00000635754 NAA60Q9H7X0 242 aa12.09□□□□□ -0.47
CLN6-211ENST00000635754 ZNF355PQ9NSJ1 428 aa12.09□□□□□ -0.47
CLN6-211ENST00000635754 VSIG4Q9Y279 399 aa12.09□□□□□ -0.47
CLN6-211ENST00000635754 WNK1Q9H4A3 2382 aa12.09□□□□□ -0.47
CLN6-211ENST00000635754 TRAV3A0A0B4J244 114 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 LINC00854A0A1B0GVQ3 168 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 CRYM-AS1A6NIL9 109 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 SNAPC5O75971 98 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 IGKV1-39P01597 117 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 IGKV1D-39P04432 117 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 CDX1P47902 265 aaPredicted RBP12.08□□□□□ -0.48
CLN6-211ENST00000635754 RAB9AP51151 201 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 RBMS2Q15434 407 aaKnown RBP12.08□□□□□ -0.48
CLN6-211ENST00000635754 SP6Q3SY56 376 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 ASPHD1Q5U4P2 390 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 H2BFWTQ7Z2G1 175 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 OR5T1Q8NG75 326 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 FAM110DQ8TAY7 271 aaPredicted RBP12.08□□□□□ -0.48
CLN6-211ENST00000635754 MYOZ3Q8TDC0 251 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 FYTTD1Q96QD9 318 aaKnown RBP12.08□□□□□ -0.48
CLN6-211ENST00000635754 TSC22D3Q99576 134 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 C7orf50Q9BRJ6 194 aaKnown RBP12.08□□□□□ -0.48
CLN6-211ENST00000635754 CCDC32Q9BV29 185 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 KLK15Q9H2R5 256 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 SLA2Q9H6Q3 261 aa12.08□□□□□ -0.48
CLN6-211ENST00000635754 H3BUA1 57 aa12.07□□□□□ -0.48
CLN6-211ENST00000635754 OR5AC1P0C628 307 aa12.07□□□□□ -0.48
CLN6-211ENST00000635754 OR9G9P0C7N8 305 aa12.07□□□□□ -0.48
CLN6-211ENST00000635754 UCP1P25874 307 aa12.07□□□□□ -0.48
CLN6-211ENST00000635754 AKR1C2P52895 323 aa12.07□□□□□ -0.48
CLN6-211ENST00000635754 ADAD2Q8NCV1 583 aaKnown RBP12.07□□□□□ -0.48
CLN6-211ENST00000635754 CASTOR1Q8WTX7 329 aa12.07□□□□□ -0.48
CLN6-211ENST00000635754 UBE2E2Q96LR5 201 aa12.07□□□□□ -0.48
CLN6-211ENST00000635754 WDR12Q9GZL7 423 aaKnown RBP12.07□□□□□ -0.48
CLN6-211ENST00000635754 TMEM222Q9H0R3 208 aa12.07□□□□□ -0.48
CLN6-211ENST00000635754 COA4Q9NYJ1 87 aa12.07□□□□□ -0.48
CLN6-211ENST00000635754 KCNIP3Q9Y2W7 256 aa12.07□□□□□ -0.48
CLN6-211ENST00000635754 TEX22C9J3V5 150 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 PF4P02776 101 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 TRGV3P03979 118 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 MYOD1P15172 320 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 AKR1C4P17516 323 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 TPPP2P59282 170 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 DHODHQ02127 395 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 C18orf65Q6ZTR6 163 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 C8orf86Q6ZUL3 223 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 TMED4Q7Z7H5 227 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 SLC25A42Q86VD7 318 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 ZNF491Q8N8L2 437 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 C4orf3Q8WVX3 66 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 TMEM230Q96A57 120 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 MS4A10Q96PG2 267 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 PRNDQ9UKY0 176 aa12.06□□□□□ -0.48
CLN6-211ENST00000635754 MGAM2Q2M2H8 2515 aa12.05□□□□□ -0.48
CLN6-211ENST00000635754 HMX3A6NHT5 357 aa12.05□□□□□ -0.48
CLN6-211ENST00000635754 CCR6P51684 374 aa12.05□□□□□ -0.48
CLN6-211ENST00000635754 OR2B8PP59922 312 aa12.05□□□□□ -0.48
CLN6-211ENST00000635754 ZNF846Q147U1 533 aa12.05□□□□□ -0.48
CLN6-211ENST00000635754 THOC7Q6I9Y2 204 aaKnown RBP12.05□□□□□ -0.48
CLN6-211ENST00000635754 OR4A16Q8NH70 328 aa12.05□□□□□ -0.48
CLN6-211ENST00000635754 RNASE11Q8TAA1 199 aaKnown RBP12.05□□□□□ -0.48
CLN6-211ENST00000635754 GLYATL2Q8WU03 294 aa12.05□□□□□ -0.48
CLN6-211ENST00000635754 GALNT14Q96FL9 552 aa12.05□□□□□ -0.48
CLN6-211ENST00000635754 QTRT1Q9BXR0 403 aaKnown RBP12.05□□□□□ -0.48
CLN6-211ENST00000635754 FKBP11Q9NYL4 201 aa12.05□□□□□ -0.48
CLN6-211ENST00000635754 NSG2Q9Y328 171 aa12.05□□□□□ -0.48
CLN6-211ENST00000635754 A0A1B0GW64 132 aa12.04□□□□□ -0.48
CLN6-211ENST00000635754 C15orf61A6NNL5 157 aa12.04□□□□□ -0.48
CLN6-211ENST00000635754 E7EUB6 86 aa12.04□□□□□ -0.48
CLN6-211ENST00000635754 CDS2O95674 445 aa12.04□□□□□ -0.48
CLN6-211ENST00000635754 ANXA3P12429 323 aa12.04□□□□□ -0.48
CLN6-211ENST00000635754 KIAA0141Q14154 515 aaPredicted RBP12.04□□□□□ -0.48
CLN6-211ENST00000635754 TMEM128Q5BJH2 165 aa12.04□□□□□ -0.48
CLN6-211ENST00000635754 TTC9CQ8N5M4 171 aa12.04□□□□□ -0.48
CLN6-211ENST00000635754 OR1L8Q8NGR8 309 aa12.04□□□□□ -0.48
CLN6-211ENST00000635754 RBPMSQ93062 196 aaKnown RBP12.04□□□□□ -0.48
CLN6-211ENST00000635754 RRNAD1Q96FB5 475 aaKnown RBP12.04□□□□□ -0.48
CLN6-211ENST00000635754 TMEM14BQ9NUH8 114 aa12.04□□□□□ -0.48
CLN6-211ENST00000635754 ZNF257Q9Y2Q1 563 aa12.04□□□□□ -0.48
CLN6-211ENST00000635754 OR51B2Q9Y5P1 312 aa12.04□□□□□ -0.48
CLN6-211ENST00000635754 CGB1A6NKQ9 187 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 NPIPB5A8MRT5 1133 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 RBMXL2O75526 392 aaKnown RBP12.03□□□□□ -0.48
CLN6-211ENST00000635754 NDUFB6O95139 128 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 BRI3O95415 125 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 IGKV1-5P01602 117 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 TRAPPC2P0DI81 140 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 TRAPPC2BP0DI82 140 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 CENPSQ8N2Z9 138 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 OR5B3Q8NH48 314 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 SRSF8Q9BRL6 282 aaKnown RBP12.03□□□□□ -0.48
CLN6-211ENST00000635754 GNB4Q9HAV0 340 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 TRRAPQ9Y4A5 3859 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 NBEAL1Q6ZS30 2694 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 A0A0G2JLM5 398 aa12.03□□□□□ -0.48
CLN6-211ENST00000635754 TEX50A0A1B0GTY4 177 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms