RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 ZNF818PQ6ZRF7 136 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 ERASQ7Z444 233 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 TRGC2P03986 189 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 CXCL2P19875 107 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 ICAM4Q14773 271 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 A0A0G2JLM5 398 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 HLA-DQB1P01920 261 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 CDX1P47902 265 aaPredicted RBP10□□□□□ -0.81
SHPRH-211ENST00000629427 TRBV5-5A0A0J9YX44 114 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 FAM90A26D6RGX4 464 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 HLA-DQA1P01909 254 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 RFPL3SP0C7P2 107 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 TMEM30BQ3MIR4 351 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 COL5A1-AS1Q5SY13 56 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 ABLIM2Q6H8Q1 611 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 PPP1R32Q7Z5V6 425 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 ELF5Q9UKW6 265 aaPredicted RBP10□□□□□ -0.81
SHPRH-211ENST00000629427 FOXA2Q9Y261 457 aaPredicted RBP10□□□□□ -0.81
SHPRH-211ENST00000629427 M0R381 172 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 LINC01587Q99440 93 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 RARRES2Q99969 163 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 FBXL15Q9H469 300 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 TMEM160Q9NX00 188 aa10□□□□□ -0.81
SHPRH-211ENST00000629427 DRAM1Q8N682 238 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 OR5P3Q8WZ94 311 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 RNASE4P34096 147 aaKnown RBP9.99□□□□□ -0.81
SHPRH-211ENST00000629427 NABP2Q9BQ15 211 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 ALKBH7Q9BT30 221 aaPredicted RBP9.99□□□□□ -0.81
SHPRH-211ENST00000629427 TMEM70Q9BUB7 260 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 CELA3AP09093 270 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 CYP2G1PQ6ZSU1 146 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 GPR132Q9UNW8 380 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 GAGE10A6NGK3 116 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 TCF21O43680 179 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 PRSS53Q2L4Q9 553 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 TMEM170BQ5T4T1 132 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 WDR82Q6UXN9 313 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 CLEC19AQ6UXS0 136 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 ACP7Q6ZNF0 438 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 ALX4Q9H161 411 aaPredicted RBP9.99□□□□□ -0.81
SHPRH-211ENST00000629427 KIAA1644Q3SXP7 199 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 MRPL32Q9BYC8 188 aaKnown RBP9.99□□□□□ -0.81
SHPRH-211ENST00000629427 TNS1Q9HBL0 1735 aaKnown RBP9.99□□□□□ -0.81
SHPRH-211ENST00000629427 GTF3C1Q12789 2109 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 PROB1E7EW31 1015 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 IGHMP01871 453 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 GPR183P32249 361 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 LINC00469Q8N7U9 141 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 Q96M66 194 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 C19orf24Q9BVV8 132 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 PARLQ9H300 379 aa9.99□□□□□ -0.81
SHPRH-211ENST00000629427 PPP1R27Q86WC6 154 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 WFDC6Q9BQY6 131 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 FBXL7Q9UJT9 491 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 FOLR2P14207 255 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 AGAP20933 346 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 FAM201AQ5SY85 155 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 TXNDC17Q9BRA2 123 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 DPM3Q9P2X0 92 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 SMIM6P0DI80 62 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 SMIM10L1P0DMW3 83 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 ZNF250P15622 560 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 PLP1P60201 277 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 RPS11P62280 158 aaKnown RBP eCLIP9.98□□□□□ -0.81
SHPRH-211ENST00000629427 COTL1Q14019 142 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 BIVMQ86UB2 503 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 C1orf162Q8NEQ5 155 aaPredicted RBP9.98□□□□□ -0.81
SHPRH-211ENST00000629427 SMIM10Q96HG1 83 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 CECR9P0C854 216 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 STHQ8IWL8 128 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 ZNF418Q8TF45 676 aaPredicted RBP9.98□□□□□ -0.81
SHPRH-211ENST00000629427 AQP10Q96PS8 301 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 SPSB2Q99619 263 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 C4orf51C9J302 202 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 SIGLEC5O15389 551 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 KLF4O43474 513 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 SRIP30626 198 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 VDAC2P45880 294 aaPredicted RBP9.98□□□□□ -0.81
SHPRH-211ENST00000629427 EIF4EBP2Q13542 120 aaPredicted RBP9.98□□□□□ -0.81
SHPRH-211ENST00000629427 SFRP2Q96HF1 295 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 ARPC1AQ92747 370 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 FOXC2Q99958 501 aa9.98□□□□□ -0.81
SHPRH-211ENST00000629427 PTPRDP23468 1912 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 C5orf66Q9H5L9 145 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 PGPEP1Q9NXJ5 209 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 LOC285556D6RIA3 1793 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 TM4SF5O14894 197 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 ASPHD2Q6ICH7 369 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 TMEM136Q6ZRR5 245 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 NRIP2Q9BQI9 281 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 NRXN2Q9P2S2 1712 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 KCNE5Q9UJ90 142 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 SPTA1P02549 2419 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 TRGV2A0A075B6R0 118 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 WISP3O95389 354 aaPredicted RBP9.97□□□□□ -0.81
SHPRH-211ENST00000629427 PRB3Q04118 309 aaPredicted RBP9.97□□□□□ -0.81
SHPRH-211ENST00000629427 PMCHL1Q16048 86 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 FAM57AQ8TBR7 257 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 TOMM7Q9P0U1 55 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 H7C1H1 209 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms