RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 GLAP06280 429 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 MRPL3P09001 348 aaKnown RBP3.87□□□□□ -1.79
LINC00649-220ENST00000628906 RRASP10301 218 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 HLA-DRB4P13762 266 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 TSPOP30536 169 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 RPL27AP46776 148 aaKnown RBP3.87□□□□□ -1.79
LINC00649-220ENST00000628906 RASSF2P50749 326 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 CCR9P51686 369 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 LINC01547P58512 204 aaPredicted RBP3.87□□□□□ -1.79
LINC00649-220ENST00000628906 HMGN3Q15651 99 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 AMIGO2Q86SJ2 522 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 ZNF709Q8N972 641 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.87□□□□□ -1.79
LINC00649-220ENST00000628906 OR10H4Q8NGA5 316 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 MRPL30Q8TCC3 161 aaKnown RBP3.87□□□□□ -1.79
LINC00649-220ENST00000628906 TNFAIP8L1Q8WVP5 186 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 IL1F10Q8WWZ1 152 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 NSL1Q96IY1 281 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 CLUHP3Q96NS8 147 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 EBF4Q9BQW3 602 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 AP3M1Q9Y2T2 418 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 HLA-DRB4X5D2U9 266 aa3.87□□□□□ -1.79
LINC00649-220ENST00000628906 TRAV5A0A0B4J249 113 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 M0QYG6 137 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 M0R1X1 148 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 MFNGO00587 321 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 GABRPO00591 440 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 DCTN3O75935 186 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 YIF1AO95070 293 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 CDRT1O95170 752 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 NAPSAO96009 420 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 EIF4EP06730 217 aaKnown RBP3.86□□□□□ -1.79
LINC00649-220ENST00000628906 FCER2P06734 321 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 SAA1P0DJI8 122 aaPredicted RBP3.86□□□□□ -1.79
LINC00649-220ENST00000628906 PTMSP20962 102 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 EVI2AP22794 236 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 PSMD7P51665 324 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 FXYD7P58549 80 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 SUMO1P63165 101 aaKnown RBP3.86□□□□□ -1.79
LINC00649-220ENST00000628906 RELQ04864 619 aaPredicted RBP3.86□□□□□ -1.79
LINC00649-220ENST00000628906 CBX3Q13185 183 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 TPBGQ13641 420 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 WFDC2Q14508 124 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 RTL8BQ17RB0 113 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 TNFAIP8L3Q5GJ75 292 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 PSMG4Q5JS54 123 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 RAB12Q6IQ22 244 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 TMED4Q7Z7H5 227 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 STXBP6Q8NFX7 210 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 OR9Q2Q8NGE9 314 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 OSR1Q8TAX0 266 aaPredicted RBP3.86□□□□□ -1.79
LINC00649-220ENST00000628906 ISG20L2Q9H9L3 353 aaKnown RBP3.86□□□□□ -1.79
LINC00649-220ENST00000628906 ARL8BQ9NVJ2 186 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 BABAM2Q9NXR7 383 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 ABRACLQ9P1F3 81 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 PEX16Q9Y5Y5 336 aa3.86□□□□□ -1.79
LINC00649-220ENST00000628906 A0A0D9SG52 128 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 TCRBV5S2A0A599 114 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 CCDC182A6NF36 153 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 HELTA6NFD8 242 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 PRM2P04554 102 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 KRT8P05787 483 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 CRHBPP24387 322 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 RRM2P31350 389 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 CEACAM6P40199 344 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 SNRPGP62308 76 aaKnown RBP3.85□□□□□ -1.79
LINC00649-220ENST00000628906 UNC119Q13432 240 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 IFT20Q8IY31 132 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 OR51A4Q8NGJ6 313 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 OR5D14Q8NGL3 314 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 TMEM37Q8WXS4 190 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 CPNE2Q96FN4 548 aaPredicted RBP3.85□□□□□ -1.79
LINC00649-220ENST00000628906 VSIG2Q96IQ7 327 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 C7orf50Q9BRJ6 194 aaKnown RBP3.85□□□□□ -1.79
LINC00649-220ENST00000628906 LINC00467Q9BRT7 94 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 METTL9Q9H1A3 318 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 OR51E2Q9H255 320 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 C21orf62Q9NYP8 219 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 TVP23BQ9NYZ1 205 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 GHRLQ9UBU3 117 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 VAX2Q9UIW0 290 aa3.85□□□□□ -1.79
LINC00649-220ENST00000628906 EXOGQ9Y2C4 368 aaKnown RBP3.85□□□□□ -1.79
LINC00649-220ENST00000628906 V9GYY5 206 aaPredicted RBP3.85□□□□□ -1.79
LINC00649-220ENST00000628906 IGHV3-66A0A0C4DH42 116 aa3.84□□□□□ -1.79
LINC00649-220ENST00000628906 METTL15A6NJ78 407 aa3.84□□□□□ -1.79
LINC00649-220ENST00000628906 CGB1A6NKQ9 187 aa3.84□□□□□ -1.79
LINC00649-220ENST00000628906 ZNF670-ZNF695F2Z2N8 137 aa3.84□□□□□ -1.79
LINC00649-220ENST00000628906 ATP8B1O43520 1251 aa3.84□□□□□ -1.79
LINC00649-220ENST00000628906 DENRO43583 198 aaKnown RBP3.84□□□□□ -1.79
LINC00649-220ENST00000628906 ZNF780AO75290 641 aaPredicted RBP3.84□□□□□ -1.79
LINC00649-220ENST00000628906 CRYZL1O95825 349 aa3.84□□□□□ -1.79
LINC00649-220ENST00000628906 GTF2F2P13984 249 aa3.84□□□□□ -1.79
LINC00649-220ENST00000628906 ZBTB25P24278 435 aa3.84□□□□□ -1.79
LINC00649-220ENST00000628906 CKAP4Q07065 602 aaKnown RBP3.84□□□□□ -1.79
LINC00649-220ENST00000628906 KCTD21Q4G0X4 260 aa3.84□□□□□ -1.79
LINC00649-220ENST00000628906 RBM48Q5RL73 367 aaKnown RBP3.84□□□□□ -1.79
LINC00649-220ENST00000628906 CGB2Q6NT52 195 aa3.84□□□□□ -1.79
LINC00649-220ENST00000628906 WDR73Q6P4I2 378 aa3.84□□□□□ -1.79
LINC00649-220ENST00000628906 CD300LDQ6UXZ3 194 aa3.84□□□□□ -1.79
LINC00649-220ENST00000628906 SSX6Q7RTT6 188 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms