RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 TSPAN4O14817 238 aa17.92■□□□□ 0.46
PNKP-220ENST00000627232 SRP19P09132 144 aaKnown RBP17.92■□□□□ 0.46
PNKP-220ENST00000627232 PPIAL4GP0DN37 164 aa17.92■□□□□ 0.46
PNKP-220ENST00000627232 HAGHQ16775 308 aa17.92■□□□□ 0.46
PNKP-220ENST00000627232 FFAR4Q5NUL3 377 aa17.92■□□□□ 0.46
PNKP-220ENST00000627232 RPP25LQ8N5L8 163 aaKnown RBP17.92■□□□□ 0.46
PNKP-220ENST00000627232 LY6G5BQ8NDX9 201 aa17.92■□□□□ 0.46
PNKP-220ENST00000627232 VSTM2AQ8TAG5 236 aa17.92■□□□□ 0.46
PNKP-220ENST00000627232 SLC39A9Q9NUM3 307 aa17.92■□□□□ 0.46
PNKP-220ENST00000627232 IGHV2-26A0A0B4J1V2 119 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 CTXND1A0A1B0GTU2 59 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 TEX50A0A1B0GTY4 177 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 hCG_1809904A0A1W2PP81 198 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 A0A1W2PPE2 198 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 A0A1W2PR64 198 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 A0A1W2PRV1 198 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 MAP1LC3B2A6NCE7 125 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 FNDC10F2Z333 226 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 NUPL2O15504 423 aaKnown RBP17.91■□□□□ 0.46
PNKP-220ENST00000627232 IFNA4P05014 189 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 USF1P22415 310 aaPredicted RBP17.91■□□□□ 0.46
PNKP-220ENST00000627232 ATRXP46100 2492 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 UQCRFS1P47985 274 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 REG1BP48304 166 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 LCN15Q6UWW0 184 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 SSX7Q7RTT5 188 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 BEND2Q8NDZ0 799 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 TMEM167AQ8TBQ9 72 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 MAP1LC3BQ9GZQ8 125 aa17.91■□□□□ 0.46
PNKP-220ENST00000627232 IGKV1D-33P01593 117 aa17.9■□□□□ 0.46
PNKP-220ENST00000627232 IGKV1-33P01594 117 aa17.9■□□□□ 0.46
PNKP-220ENST00000627232 IGLV1-47P01700 117 aa17.9■□□□□ 0.46
PNKP-220ENST00000627232 DIAPH2-AS1Q14236 149 aa17.9■□□□□ 0.46
PNKP-220ENST00000627232 HLA-DRB5Q30154 266 aa17.9■□□□□ 0.46
PNKP-220ENST00000627232 OR10G4Q8NGN3 311 aa17.9■□□□□ 0.46
PNKP-220ENST00000627232 OR10G9Q8NGN4 311 aa17.9■□□□□ 0.46
PNKP-220ENST00000627232 OR10G7Q8NGN6 311 aa17.9■□□□□ 0.46
PNKP-220ENST00000627232 CLEC7AQ9BXN2 247 aa17.9■□□□□ 0.46
PNKP-220ENST00000627232 ACTR3CQ9C0K3 210 aaPredicted RBP17.9■□□□□ 0.46
PNKP-220ENST00000627232 CHODLQ9H9P2 273 aa17.9■□□□□ 0.46
PNKP-220ENST00000627232 CA2P00918 260 aa17.89■□□□□ 0.45
PNKP-220ENST00000627232 LIPFP07098 398 aa17.89■□□□□ 0.45
PNKP-220ENST00000627232 OR13C7P0DN81 318 aa17.89■□□□□ 0.45
PNKP-220ENST00000627232 ACOT6Q3I5F7 207 aaPredicted RBP17.89■□□□□ 0.45
PNKP-220ENST00000627232 SOHLH1Q5JUK2 328 aa17.89■□□□□ 0.45
PNKP-220ENST00000627232 TREML4Q6UXN2 200 aa17.89■□□□□ 0.45
PNKP-220ENST00000627232 Q8N7P7 452 aa17.89■□□□□ 0.45
PNKP-220ENST00000627232 COL6A6A6NMZ7 2263 aa17.89■□□□□ 0.45
PNKP-220ENST00000627232 INS-IGF2F8WCM5 200 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 IFNA1P01562 189 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 MYOD1P15172 320 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 RPL8P62917 257 aaKnown RBP17.88■□□□□ 0.45
PNKP-220ENST00000627232 HINT2Q9BX68 163 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 PATZ1Q9HBE1 687 aaKnown RBP17.88■□□□□ 0.45
PNKP-220ENST00000627232 NPVFQ9HCQ7 196 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 AMMECR1Q9Y4X0 333 aaPredicted RBP17.88■□□□□ 0.45
PNKP-220ENST00000627232 SMCO3A2RU48 225 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 CYB5BO43169 146 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 IGLV2-23P01705 113 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 BCL2P10415 239 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 OPRK1P41145 380 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 C2orf83Q53S99 150 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 OR1L8Q8NGR8 309 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 RXFP4Q8TDU9 374 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 COMMD5Q9GZQ3 224 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 KCNIP2Q9NS61 270 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 GNG13Q9P2W3 67 aa17.88■□□□□ 0.45
PNKP-220ENST00000627232 NCOR2Q9Y618 2525 aa17.87■□□□□ 0.45
PNKP-220ENST00000627232 LY6HO94772 140 aa17.87■□□□□ 0.45
PNKP-220ENST00000627232 LGALS7P47929 136 aa17.87■□□□□ 0.45
PNKP-220ENST00000627232 BSXQ3C1V8 233 aa17.87■□□□□ 0.45
PNKP-220ENST00000627232 VMA21Q3ZAQ7 101 aa17.87■□□□□ 0.45
PNKP-220ENST00000627232 NDUFA4L2Q9NRX3 87 aa17.87■□□□□ 0.45
PNKP-220ENST00000627232 LSM4Q9Y4Z0 139 aaKnown RBP17.87■□□□□ 0.45
PNKP-220ENST00000627232 A0A1W2PPR1 153 aa17.86■□□□□ 0.45
PNKP-220ENST00000627232 TAGLN2P37802 199 aaKnown RBP17.86■□□□□ 0.45
PNKP-220ENST00000627232 FGF8P55075 233 aaPredicted RBP17.86■□□□□ 0.45
PNKP-220ENST00000627232 HNF4GQ14541 408 aa17.86■□□□□ 0.45
PNKP-220ENST00000627232 TMEM88Q6PEY1 159 aa17.86■□□□□ 0.45
PNKP-220ENST00000627232 P2RX4Q99571 388 aa17.86■□□□□ 0.45
PNKP-220ENST00000627232 A0A1W2PN81 502 aa17.85■□□□□ 0.45
PNKP-220ENST00000627232 SEC14L6B5MCN3 397 aa17.85■□□□□ 0.45
PNKP-220ENST00000627232 BUB1B-PAK6H3BSN5 160 aa17.85■□□□□ 0.45
PNKP-220ENST00000627232 NDUFS6O75380 124 aaKnown RBP17.85■□□□□ 0.45
PNKP-220ENST00000627232 CHRNA7P36544 502 aa17.85■□□□□ 0.45
PNKP-220ENST00000627232 RBMS3Q6XE24 437 aaKnown RBP17.85■□□□□ 0.45
PNKP-220ENST00000627232 CBLN2Q8IUK8 224 aa17.85■□□□□ 0.45
PNKP-220ENST00000627232 MGST2Q99735 147 aa17.85■□□□□ 0.45
PNKP-220ENST00000627232 A6NNC1 897 aa17.84■□□□□ 0.45
PNKP-220ENST00000627232 C22orf46C9J442 243 aa17.84■□□□□ 0.45
PNKP-220ENST00000627232 IGFBP2P18065 325 aa17.84■□□□□ 0.45
PNKP-220ENST00000627232 AWAT1Q58HT5 328 aa17.84■□□□□ 0.45
PNKP-220ENST00000627232 ARSJQ5FYB0 599 aaPredicted RBP17.84■□□□□ 0.45
PNKP-220ENST00000627232 FAM122CQ6P4D5 195 aa17.84■□□□□ 0.45
PNKP-220ENST00000627232 GGTLC1Q9BX51 225 aa17.84■□□□□ 0.45
PNKP-220ENST00000627232 SLC25A22Q9H936 323 aa17.84■□□□□ 0.45
PNKP-220ENST00000627232 VAX2Q9UIW0 290 aa17.84■□□□□ 0.45
PNKP-220ENST00000627232 HIVEP3Q5T1R4 2406 aa17.83■□□□□ 0.45
PNKP-220ENST00000627232 ZFP92A6NM28 416 aa17.83■□□□□ 0.45
PNKP-220ENST00000627232 M0R1W7 72 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms