RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 SRSF7Q16629 238 aaKnown RBP eCLIP9.62□□□□□ -0.87
LINC00538-201ENST00000626109 ACTL10Q5JWF8 245 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 FBXW12Q6X9E4 464 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 LINC00336Q6ZUF6 198 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 KIRREL1Q96J84 757 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 SMCO4Q9NRQ5 59 aa9.62□□□□□ -0.87
LINC00538-201ENST00000626109 HCFC1P51610 2035 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 A1L4Q6 167 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 C5orf49A4QMS7 147 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 MT-CO2P00403 227 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 OR10J4P0C629 311 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 OMGP23515 440 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 ZNF92Q03936 586 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 UBE2V1Q13404 147 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 PIGYQ3MUY2 71 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 SP6Q3SY56 376 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 AVPI1Q5T686 147 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 CBLN2Q8IUK8 224 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 CYYR1Q96J86 154 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 SPIN2AQ99865 258 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 SPIN2BQ9BPZ2 258 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 GINS3Q9BRX5 216 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 PBDC1Q9BVG4 233 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 SMIM3Q9BZL3 60 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 FAM234AQ9H0X4 552 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 C1RLQ9NZP8 487 aa9.61□□□□□ -0.87
LINC00538-201ENST00000626109 UBR5O95071 2799 aaPredicted RBP9.61□□□□□ -0.87
LINC00538-201ENST00000626109 PHF1O43189 567 aaPredicted RBP9.6□□□□□ -0.87
LINC00538-201ENST00000626109 CDS2O95674 445 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 CRYAAP02489 173 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 HGFACQ04756 655 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 FOXL1Q12952 345 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 RNF212Q495C1 297 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 PHLDA2Q53GA4 152 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 Q6ZS49 121 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 LYZL2Q7Z4W2 148 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 SAXO1Q8IYX7 474 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 LAMP3Q9UQV4 416 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 IGKV1-12A0A0C4DH73 117 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 RNF223E7ERA6 249 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 H3BS24 57 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 MPPED1O15442 326 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 SPRY2O43597 315 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 OR7C1O76099 320 aaPredicted RBP9.6□□□□□ -0.87
LINC00538-201ENST00000626109 CLDN1O95832 211 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 IGKV1D-12P01611 117 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 PRH1P02810 166 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 NKX2-1P43699 371 aaPredicted RBP9.6□□□□□ -0.87
LINC00538-201ENST00000626109 BSPH1Q075Z2 132 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 ZNF266Q14584 549 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 LINC00528Q8N1L1 170 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 C15orf54Q8N8G6 183 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 ABHD14BQ96IU4 210 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 ATP5SQ99766 215 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 ADAT1Q9BUB4 502 aaKnown RBP9.6□□□□□ -0.87
LINC00538-201ENST00000626109 LIME1Q9H400 295 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 SS18L2Q9UHA2 77 aa9.6□□□□□ -0.87
LINC00538-201ENST00000626109 MYO18BQ8IUG5 2567 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 IGHV2OR16-5A0A0B4J2B6 119 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 C3orf85A0A1B0GTC6 90 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.59□□□□□ -0.87
LINC00538-201ENST00000626109 DUXBA0A1W2PPF3 345 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 DPRXA6NFQ7 191 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 RNF212BA8MTL3 300 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 AGPAT2O15120 278 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 CYB5BO43169 146 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 S1PR2O95136 353 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 PPYP01298 95 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 HIST1H1EP10412 219 aaKnown RBP9.59□□□□□ -0.87
LINC00538-201ENST00000626109 SNCAP37840 140 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 ATP6V1FQ16864 119 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 NCMAPQ5T1S8 102 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 PSMG3-AS1Q96PY0 264 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 SLC25A31Q9H0C2 315 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 SMDT1Q9H4I9 107 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 RELNP78509 3460 aa9.59□□□□□ -0.87
LINC00538-201ENST00000626109 FOLR2P14207 255 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 AADACP22760 399 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 RAB5BP61020 215 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 RND3P61587 244 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 ZNF616Q08AN1 781 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 SLC25A26Q70HW3 274 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 ZNF695Q8IW36 515 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 MKXQ8IYA7 352 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 TMEM37Q8WXS4 190 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 EIF5A2Q9GZV4 153 aaKnown RBP9.58□□□□□ -0.88
LINC00538-201ENST00000626109 DOPEY1Q5JWR5 2465 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 A0A0A0MQY5 61 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 KIR2DS1A0A191URI9 304 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 TRDCB7Z8K6 153 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 GP9P14770 177 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 COX6B1P14854 86 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 KIR2DS4P43632 304 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 TCL1AP56279 114 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 KIR2DS1Q14954 304 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 MPV17LQ2QL34 196 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 MIDNQ504T8 468 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 SAMD13Q5VXD3 122 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 OR8U1Q8NH10 309 aa9.58□□□□□ -0.88
LINC00538-201ENST00000626109 DYRK2Q92630 601 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms