RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 ANKRD20A5PA0PJZ0 165 aa9.34□□□□□ -0.91
VPS8-227ENST00000625842 TMEM250H0YL14 139 aa9.34□□□□□ -0.91
VPS8-227ENST00000625842 ICMTO60725 284 aa9.34□□□□□ -0.91
VPS8-227ENST00000625842 C1QL1O75973 258 aa9.34□□□□□ -0.91
VPS8-227ENST00000625842 CEBPDP49716 269 aaPredicted RBP9.34□□□□□ -0.91
VPS8-227ENST00000625842 GTF2H5Q6ZYL4 71 aa9.34□□□□□ -0.91
VPS8-227ENST00000625842 PHYHIPLQ96FC7 376 aa9.34□□□□□ -0.91
VPS8-227ENST00000625842 TMEM218A2RU14 115 aa9.34□□□□□ -0.91
VPS8-227ENST00000625842 RBFOX2O43251 390 aaKnown RBP eCLIP9.34□□□□□ -0.91
VPS8-227ENST00000625842 NPIPB3Q92617 1050 aa9.34□□□□□ -0.91
VPS8-227ENST00000625842 RCC2Q9P258 522 aaKnown RBP9.34□□□□□ -0.91
VPS8-227ENST00000625842 CSN3P07498 182 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 CACNG7P62955 275 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 DEFB113Q30KQ7 82 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 VMO1Q7Z5L0 202 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 AQP10Q96PS8 301 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 GGACTQ9BVM4 153 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 BPESC1Q9GZL8 116 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 SLC35B3Q9H1N7 401 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 SOX21Q9Y651 276 aaPredicted RBP9.33□□□□□ -0.92
VPS8-227ENST00000625842 SCN1AP35498 2009 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 B4DEV8 164 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 IGHV1-46P01743 117 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 HIST1H3AP68431 136 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 COTL1Q14019 142 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 PIP4P1Q86T03 277 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 KIR3DL3Q8N743 410 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 ANGPTL6Q8NI99 470 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 NRG4Q8WWG1 115 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 TMEM222Q9H0R3 208 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 TRPM7Q96QT4 1865 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 SNAI3Q3KNW1 292 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 ERASQ7Z444 233 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 GVQW1Q8N7I0 195 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 SCTP09683 121 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 PRCDQ00LT1 54 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 TMEM183BQ1AE95 376 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 TMEM42Q69YG0 159 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 ZNF502Q8TBZ5 544 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 FLVCR2Q9UPI3 526 aa9.33□□□□□ -0.92
VPS8-227ENST00000625842 COL4A5P29400 1685 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 MSGN1A6NI15 193 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 CDK2AP2O75956 126 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 NUDT3O95989 172 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 LGALS3P17931 250 aaKnown RBP9.32□□□□□ -0.92
VPS8-227ENST00000625842 NAA50Q9GZZ1 169 aaKnown RBP9.32□□□□□ -0.92
VPS8-227ENST00000625842 NXT2Q9NPJ8 142 aaKnown RBP9.32□□□□□ -0.92
VPS8-227ENST00000625842 YPEL1O60688 119 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 SRSF12Q8WXF0 261 aaKnown RBP9.32□□□□□ -0.92
VPS8-227ENST00000625842 YPEL2Q96QA6 119 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 WNT10AQ9GZT5 417 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 BRWD3Q6RI45 1802 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 BAK1Q16611 211 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 RAB37Q96AX2 223 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 SOSTQ9BQB4 213 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 FOXI3A8MTJ6 420 aaPredicted RBP9.32□□□□□ -0.92
VPS8-227ENST00000625842 PGLYRP1O75594 196 aaPredicted RBP9.32□□□□□ -0.92
VPS8-227ENST00000625842 C1orf100Q5SVJ3 147 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 IGF2-ASQ6U949 168 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 BIVMQ86UB2 503 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 OR5AN1Q8NGI8 311 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 OR10S1Q8NGN2 331 aa9.32□□□□□ -0.92
VPS8-227ENST00000625842 FAM223BA6NKX1 122 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 C15orf61A6NNL5 157 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 GATA4P43694 442 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 EWSR1Q01844 656 aaKnown RBP eCLIP9.31□□□□□ -0.92
VPS8-227ENST00000625842 ZNF585BQ52M93 769 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 FAM223AQ8IWN6 122 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 BEND2Q8NDZ0 799 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 ASCL2Q99929 193 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 IFI27L2Q9H2X8 130 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 SPTAN1Q13813 2472 aaKnown RBP9.31□□□□□ -0.92
VPS8-227ENST00000625842 A0A0A6YYJ9 748 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 IGHV3-35A0A0C4DH35 117 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 TEX48A0A1B0GUV7 120 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 M0R143 59 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 MT-ND6P03923 174 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 OR13C6PQ8NH95 151 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 TAF15Q92804 592 aaKnown RBP eCLIP9.31□□□□□ -0.92
VPS8-227ENST00000625842 HIST1H2BAQ96A08 127 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 SLC25A15Q9Y619 301 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 RRHO14718 337 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 ZNF253O75346 499 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 DNAL4O96015 105 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 GTF3AQ92664 365 aaKnown RBP9.31□□□□□ -0.92
VPS8-227ENST00000625842 LINC01549A6NIU2 74 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 TMEM178BH3BS89 294 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 PHOX2AO14813 284 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 FABP4P15090 132 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 FAM206AQ9NX38 181 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 ZFP30Q9Y2G7 519 aa9.31□□□□□ -0.92
VPS8-227ENST00000625842 TRBV7-1A0A0A6YYK4 115 aa9.3□□□□□ -0.92
VPS8-227ENST00000625842 TRAV21A0A0B4J279 112 aa9.3□□□□□ -0.92
VPS8-227ENST00000625842 A0A0G2JMM0 328 aa9.3□□□□□ -0.92
VPS8-227ENST00000625842 A0A1W2PPB8 328 aa9.3□□□□□ -0.92
VPS8-227ENST00000625842 A0A1W2PRS3 328 aa9.3□□□□□ -0.92
VPS8-227ENST00000625842 RBMY1BA6NDE4 496 aaKnown RBP9.3□□□□□ -0.92
VPS8-227ENST00000625842 RBMY1EA6NEQ0 496 aaKnown RBP9.3□□□□□ -0.92
VPS8-227ENST00000625842 KIR3DP1A8MWS1 328 aa9.3□□□□□ -0.92
VPS8-227ENST00000625842 RBMY1DP0C7P1 496 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms