RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 OR4A47Q6IF82 309 aa5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 H2BFWTQ7Z2G1 175 aa5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 CCDC190Q86UF4 302 aa5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 ZNF695Q8IW36 515 aa5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 OR5T1Q8NG75 326 aa5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 OR6Q1Q8NGQ2 317 aa5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 OR4A5Q8NH83 315 aa5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 CASTOR1Q8WTX7 329 aa5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 SRSF12Q8WXF0 261 aaKnown RBP5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 MS4A10Q96PG2 267 aa5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 OR5B12Q96R08 314 aa5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 HINT2Q9BX68 163 aa5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 ZNF430Q9H8G1 570 aaPredicted RBP5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 TMEM140Q9NV12 185 aa5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 ZNF580Q9UK33 172 aa5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 FBXO7Q9Y3I1 522 aa5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 FBN1P35555 2871 aaKnown RBP5.66□□□□□ -1.5
NPLOC4-221ENST00000625705 C3orf85A0A1B0GTC6 90 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 C13orf42A0A1B0GVH6 325 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 MARCH11A6NNE9 402 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 CENPXA8MT69 81 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 H0Y980 276 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 ARPC1BO15143 372 aaKnown RBP5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 DHFRP00374 187 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 DEFA4P12838 97 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 HLA-GP17693 338 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 SLC6A1P30531 599 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 MAS1LP35410 378 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 MECP2P51608 486 aaKnown RBP5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 SURF2Q15527 256 aaPredicted RBP5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 ZNF79Q15937 498 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 AKIRIN2Q53H80 203 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 C10orf55Q5SWW7 151 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 FOXB2Q5VYV0 432 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 TMED4Q7Z7H5 227 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 SLC25A42Q86VD7 318 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 LHFPL1Q86WI0 220 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 SGPP2Q8IWX5 399 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 GDPD1Q8N9F7 314 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 TMEM167AQ8TBQ9 72 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 WIPF2Q8TF74 440 aaPredicted RBP5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 C4orf3Q8WVX3 66 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 DPF1Q92782 380 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 MRGPRFQ96AM1 343 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 TMEM68Q96MH6 324 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 PDCD10Q9BUL8 212 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 SLA2Q9H6Q3 261 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 BATF3Q9NR55 127 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 BET1LQ9NYM9 111 aa5.65□□□□□ -1.5
NPLOC4-221ENST00000625705 CCL24O00175 119 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 CYB5BO43169 146 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 CRYGBP07316 175 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 CTSDP07339 412 aaPredicted RBP5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 OR9G9P0C7N8 305 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 AKR1C4P17516 323 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 PSMB8P28062 276 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 ETV6P41212 452 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 RAB9AP51151 201 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 CRIP2P52943 208 aaPredicted RBP5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 OR2B8PP59922 312 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 RND3P61587 244 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 ZNF45Q02386 682 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 CFHR3Q02985 330 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 DEFB136Q30KP8 78 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 CNPY1Q3B7I2 92 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 SP6Q3SY56 376 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 PUSL1Q8N0Z8 303 aaKnown RBP5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 OR4A16Q8NH70 328 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 TRIM63Q969Q1 353 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 RRNAD1Q96FB5 475 aaKnown RBP5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 DUX3Q96PT4 197 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 TSC22D3Q99576 134 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 SOSTQ9BQB4 213 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 SRRQ9GZT4 340 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 KLK15Q9H2R5 256 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 FKBP11Q9NYL4 201 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 PRNDQ9UKY0 176 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 VSIG4Q9Y279 399 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 KCNIP3Q9Y2W7 256 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 NUBP2Q9Y5Y2 271 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 ANK3Q12955 4377 aaKnown RBP5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 MXRA5Q9NR99 2828 aa5.64□□□□□ -1.51
NPLOC4-221ENST00000625705 A0A0G2JLM5 398 aa5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 HMX3A6NHT5 357 aa5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 H3BUA1 57 aa5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 UPK2O00526 184 aa5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 B3GALNT1O75752 331 aa5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 IGHV3-11P01762 117 aa5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 REG1AP05451 166 aa5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 OR5AC1P0C628 307 aa5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 ZNF735P0CB33 412 aa5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 EGR2P11161 476 aaPredicted RBP5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 ANXA3P12429 323 aa5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 PPIFP30405 207 aaKnown RBP5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 MYCNOSP40205 109 aa5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 CDX1P47902 265 aaPredicted RBP5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 BRWD1-AS2P59051 145 aa5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 KLF9Q13886 244 aaPredicted RBP5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 POU2AF1Q16633 256 aa5.63□□□□□ -1.51
NPLOC4-221ENST00000625705 C18orf65Q6ZTR6 163 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms