RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 CNBD2Q96M20 576 aa14.16□□□□□ -0.14
SMN1-211ENST00000625245 CCL28Q9NRJ3 127 aa14.16□□□□□ -0.14
SMN1-211ENST00000625245 BLOC1S6Q9UL45 172 aa14.16□□□□□ -0.14
SMN1-211ENST00000625245 A0A0J9YWU9 116 aa14.15□□□□□ -0.14
SMN1-211ENST00000625245 CGB1A6NKQ9 187 aa14.15□□□□□ -0.14
SMN1-211ENST00000625245 NOTOA8MTQ0 251 aa14.15□□□□□ -0.14
SMN1-211ENST00000625245 ARPC4P59998 168 aa14.15□□□□□ -0.14
SMN1-211ENST00000625245 PLET1Q6UQ28 207 aa14.15□□□□□ -0.14
SMN1-211ENST00000625245 SPAG16Q8N0X2 631 aa14.15□□□□□ -0.14
SMN1-211ENST00000625245 MARC2Q969Z3 335 aa14.15□□□□□ -0.14
SMN1-211ENST00000625245 AIFM2Q9BRQ8 373 aa14.15□□□□□ -0.14
SMN1-211ENST00000625245 BET1LQ9NYM9 111 aa14.15□□□□□ -0.14
SMN1-211ENST00000625245 DAPK2Q9UIK4 370 aa14.15□□□□□ -0.14
SMN1-211ENST00000625245 TRAV25A0A0B4J276 109 aa14.14□□□□□ -0.15
SMN1-211ENST00000625245 PTHLHP12272 177 aa14.14□□□□□ -0.15
SMN1-211ENST00000625245 FCGR2CP31995 323 aa14.14□□□□□ -0.15
SMN1-211ENST00000625245 OR2B8PP59922 312 aa14.14□□□□□ -0.15
SMN1-211ENST00000625245 KLK9Q2XQG4 91 aa14.14□□□□□ -0.15
SMN1-211ENST00000625245 TIMM50Q3ZCQ8 353 aa14.14□□□□□ -0.15
SMN1-211ENST00000625245 SLC38A6Q8IZM9 456 aa14.14□□□□□ -0.15
SMN1-211ENST00000625245 OR2C3Q8N628 320 aa14.14□□□□□ -0.15
SMN1-211ENST00000625245 OR4A5Q8NH83 315 aa14.14□□□□□ -0.15
SMN1-211ENST00000625245 MRPL27Q9P0M9 148 aaKnown RBP14.14□□□□□ -0.15
SMN1-211ENST00000625245 UBQLN2Q9UHD9 624 aa14.14□□□□□ -0.15
SMN1-211ENST00000625245 KLK9Q9UKQ9 250 aa14.14□□□□□ -0.15
SMN1-211ENST00000625245 UFC1Q9Y3C8 167 aa14.14□□□□□ -0.15
SMN1-211ENST00000625245 SULT1C2O00338 296 aa14.13□□□□□ -0.15
SMN1-211ENST00000625245 SCGNO76038 276 aa14.13□□□□□ -0.15
SMN1-211ENST00000625245 C8orf88P0DMB2 117 aa14.13□□□□□ -0.15
SMN1-211ENST00000625245 GALP22466 123 aa14.13□□□□□ -0.15
SMN1-211ENST00000625245 ZNF502Q8TBZ5 544 aa14.13□□□□□ -0.15
SMN1-211ENST00000625245 LGALS14Q8TCE9 139 aa14.13□□□□□ -0.15
SMN1-211ENST00000625245 COMMD5Q9GZQ3 224 aa14.13□□□□□ -0.15
SMN1-211ENST00000625245 RRP15Q9Y3B9 282 aaKnown RBP14.13□□□□□ -0.15
SMN1-211ENST00000625245 TRAV3A0A0B4J244 114 aa14.12□□□□□ -0.15
SMN1-211ENST00000625245 NUPR2A6NF83 97 aa14.12□□□□□ -0.15
SMN1-211ENST00000625245 SPRY2O43597 315 aa14.12□□□□□ -0.15
SMN1-211ENST00000625245 APOC4P55056 127 aa14.12□□□□□ -0.15
SMN1-211ENST00000625245 EWSR1Q01844 656 aaKnown RBP eCLIP14.12□□□□□ -0.15
SMN1-211ENST00000625245 LYG2Q86SG7 212 aa14.12□□□□□ -0.15
SMN1-211ENST00000625245 BEST4Q8NFU0 473 aa14.12□□□□□ -0.15
SMN1-211ENST00000625245 OR13F1Q8NGS4 319 aa14.12□□□□□ -0.15
SMN1-211ENST00000625245 SLC5A7Q9GZV3 580 aa14.12□□□□□ -0.15
SMN1-211ENST00000625245 TXNL4BQ9NX01 149 aaKnown RBP14.12□□□□□ -0.15
SMN1-211ENST00000625245 THYN1Q9P016 225 aa14.12□□□□□ -0.15
SMN1-211ENST00000625245 TRAV18A0A075B6X5 111 aa14.11□□□□□ -0.15
SMN1-211ENST00000625245 IGLC7A0M8Q6 106 aa14.11□□□□□ -0.15
SMN1-211ENST00000625245 UPK2O00526 184 aa14.11□□□□□ -0.15
SMN1-211ENST00000625245 FCER2P06734 321 aa14.11□□□□□ -0.15
SMN1-211ENST00000625245 RPA2P15927 270 aa14.11□□□□□ -0.15
SMN1-211ENST00000625245 ELLP55199 621 aaPredicted RBP14.11□□□□□ -0.15
SMN1-211ENST00000625245 FXYD4P59646 89 aa14.11□□□□□ -0.15
SMN1-211ENST00000625245 DEFB135Q30KP9 77 aa14.11□□□□□ -0.15
SMN1-211ENST00000625245 IZUMO2Q6UXV1 221 aa14.11□□□□□ -0.15
SMN1-211ENST00000625245 GVQW1Q8N7I0 195 aa14.11□□□□□ -0.15
SMN1-211ENST00000625245 VCX3BQ9H321 246 aa14.11□□□□□ -0.15
SMN1-211ENST00000625245 C5orf66Q9H5L9 145 aa14.11□□□□□ -0.15
SMN1-211ENST00000625245 RHBDL2Q9NX52 303 aa14.11□□□□□ -0.15
SMN1-211ENST00000625245 HPRT1P00492 218 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 PPYP01298 95 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 NQO2P16083 231 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 PTBP1P26599 531 aaKnown RBP eCLIP14.1□□□□□ -0.15
SMN1-211ENST00000625245 PSMB9P28065 219 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 BMI1P35226 326 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 TAS2R31P59538 309 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 TNFRSF9Q07011 255 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 CATR1Q13166 79 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 CEMP1Q6PRD7 247 aaPredicted RBP14.1□□□□□ -0.15
SMN1-211ENST00000625245 Q6ZWC4 215 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 TPRA1Q86W33 373 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 WFDC3Q8IUB2 231 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 ZBTB34Q8NCN2 500 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 DMBX1Q8NFW5 382 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 OR10W1Q8NGF6 305 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 SPAG8Q99932 426 aaPredicted RBP14.1□□□□□ -0.15
SMN1-211ENST00000625245 ZNF436Q9C0F3 470 aaPredicted RBP14.1□□□□□ -0.15
SMN1-211ENST00000625245 TP53TG1Q9Y2A0 90 aa14.1□□□□□ -0.15
SMN1-211ENST00000625245 OR2T8A6NH00 312 aa14.09□□□□□ -0.15
SMN1-211ENST00000625245 CYB5BO43169 146 aa14.09□□□□□ -0.15
SMN1-211ENST00000625245 RBFOX2O43251 390 aaKnown RBP eCLIP14.09□□□□□ -0.15
SMN1-211ENST00000625245 TGOLN2O43493 480 aa14.09□□□□□ -0.15
SMN1-211ENST00000625245 FGF9P31371 208 aaPredicted RBP14.09□□□□□ -0.15
SMN1-211ENST00000625245 HSPA13P48723 471 aa14.09□□□□□ -0.15
SMN1-211ENST00000625245 MSMO1Q15800 293 aa14.09□□□□□ -0.15
SMN1-211ENST00000625245 LAMTOR1Q6IAA8 161 aa14.09□□□□□ -0.15
SMN1-211ENST00000625245 SLC25A24Q6NUK1 477 aa14.09□□□□□ -0.15
SMN1-211ENST00000625245 SFXN4Q6P4A7 337 aa14.09□□□□□ -0.15
SMN1-211ENST00000625245 OR51H1Q8NH63 302 aa14.09□□□□□ -0.15
SMN1-211ENST00000625245 QTRT1Q9BXR0 403 aaKnown RBP14.09□□□□□ -0.15
SMN1-211ENST00000625245 TMEM140Q9NV12 185 aa14.09□□□□□ -0.15
SMN1-211ENST00000625245 SSR3Q9UNL2 185 aa14.09□□□□□ -0.15
SMN1-211ENST00000625245 IGHV3-21A0A0B4J1V1 117 aa14.08□□□□□ -0.16
SMN1-211ENST00000625245 UBE2CO00762 179 aa14.08□□□□□ -0.16
SMN1-211ENST00000625245 OR13C7P0DN81 318 aa14.08□□□□□ -0.16
SMN1-211ENST00000625245 RPL35AP18077 110 aaKnown RBP14.08□□□□□ -0.16
SMN1-211ENST00000625245 MXD1Q05195 221 aa14.08□□□□□ -0.16
SMN1-211ENST00000625245 ZNF773Q6PK81 442 aa14.08□□□□□ -0.16
SMN1-211ENST00000625245 HOGA1Q86XE5 327 aa14.08□□□□□ -0.16
SMN1-211ENST00000625245 STPG3Q8N7X2 389 aa14.08□□□□□ -0.16
SMN1-211ENST00000625245 OR5H6Q8NGV6 325 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms