RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 SAA4P35542 130 aa9.44□□□□□ -0.9
LINC00963-220ENST00000625171 PSG5Q15238 335 aa9.44□□□□□ -0.9
LINC00963-220ENST00000625171 CLEC9AQ6UXN8 241 aa9.44□□□□□ -0.9
LINC00963-220ENST00000625171 SLC51BQ86UW2 128 aa9.44□□□□□ -0.9
LINC00963-220ENST00000625171 PIP4P2Q8N4L2 257 aa9.44□□□□□ -0.9
LINC00963-220ENST00000625171 TEX29Q8N6K0 151 aa9.44□□□□□ -0.9
LINC00963-220ENST00000625171 TMEM252Q8N6L7 170 aa9.44□□□□□ -0.9
LINC00963-220ENST00000625171 WFDC11Q8NEX6 87 aa9.44□□□□□ -0.9
LINC00963-220ENST00000625171 SRSF8Q9BRL6 282 aaKnown RBP9.44□□□□□ -0.9
LINC00963-220ENST00000625171 BCL2L11O43521 198 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 SCGB1D2O95969 90 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 FAM106CPP0CH98 169 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 VDAC2P45880 294 aaPredicted RBP9.43□□□□□ -0.9
LINC00963-220ENST00000625171 RPL8P62917 257 aaKnown RBP9.43□□□□□ -0.9
LINC00963-220ENST00000625171 VAMP2P63027 116 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 RPP30P78346 268 aaKnown RBP9.43□□□□□ -0.9
LINC00963-220ENST00000625171 PRCDQ00LT1 54 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 SSX2Q16385 188 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 MRGPRG-AS1Q2M3A8 158 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 CYB5R2Q6BCY4 276 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 TMEM14EPQ6UXP3 125 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 C9orf139Q6ZV77 190 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 MMD2Q8IY49 270 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 VKORC1L1Q8N0U8 176 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 STOML3Q8TAV4 291 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 DTD1Q8TEA8 209 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 EAF1Q96JC9 268 aaPredicted RBP9.43□□□□□ -0.9
LINC00963-220ENST00000625171 MDFIQ99750 246 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 QTRT1Q9BXR0 403 aaKnown RBP9.43□□□□□ -0.9
LINC00963-220ENST00000625171 ARL6Q9H0F7 186 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 RBKSQ9H477 322 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 NDUFA4L2Q9NRX3 87 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 PLSCR3Q9NRY6 295 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 SIGLEC9Q9Y336 463 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 HILPDAQ9Y5L2 63 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 U3KQ87 197 aa9.43□□□□□ -0.9
LINC00963-220ENST00000625171 TRAV3A0A0B4J244 114 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 TEX50A0A1B0GTY4 177 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 MSGN1A6NI15 193 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 RRHO14718 337 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 JTBO76095 146 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 TGFAP01135 160 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 SNRNP70P08621 437 aaKnown RBP9.42□□□□□ -0.9
LINC00963-220ENST00000625171 SULT1A1P50225 295 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 EIF5AP63241 154 aaKnown RBP9.42□□□□□ -0.9
LINC00963-220ENST00000625171 IFITM2Q01629 132 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 PRSS8Q16651 343 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 KLF17Q5JT82 389 aaPredicted RBP9.42□□□□□ -0.9
LINC00963-220ENST00000625171 SSX9Q7RTT3 188 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 HSD17B13Q7Z5P4 300 aaPredicted RBP9.42□□□□□ -0.9
LINC00963-220ENST00000625171 PPP1R27Q86WC6 154 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 PRIMA1Q86XR5 153 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 DYNAPQ8N1N2 210 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 OR1L8Q8NGR8 309 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 PHYHIPLQ96FC7 376 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 RITA1Q96K30 269 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 SMR3AQ99954 134 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 ARPC5LQ9BPX5 153 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 MAGT1Q9H0U3 335 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 HIPK2Q9H2X6 1198 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 PSENENQ9NZ42 101 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 TCF19Q9Y242 345 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 BOLA1Q9Y3E2 137 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 OR51B2Q9Y5P1 312 aa9.42□□□□□ -0.9
LINC00963-220ENST00000625171 TLN2Q9Y4G6 2542 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 HIVEP2P31629 2446 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 A0A1W2PN81 502 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 KANTRA0A1W2PQU2 76 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 NBR2O15453 112 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 SSSCA1O60232 199 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 RBMXL2O75526 392 aaKnown RBP9.41□□□□□ -0.9
LINC00963-220ENST00000625171 AVPP01185 164 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 IFNA17P01571 189 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 CHRNA7P36544 502 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 AP2S1P53680 142 aaPredicted RBP9.41□□□□□ -0.9
LINC00963-220ENST00000625171 PRB3Q04118 309 aaPredicted RBP9.41□□□□□ -0.9
LINC00963-220ENST00000625171 ATP6V1FQ16864 119 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 TUSC1Q2TAM9 212 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 BSXQ3C1V8 233 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 TEX261Q6UWH6 196 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 Q71RC1 249 aaPredicted RBP9.41□□□□□ -0.9
LINC00963-220ENST00000625171 COMMD5Q9GZQ3 224 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 ARV1Q9H2C2 271 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 PRDM13Q9H4Q3 707 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 ZNF430Q9H8G1 570 aaPredicted RBP9.41□□□□□ -0.9
LINC00963-220ENST00000625171 CYTL1Q9NRR1 136 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 C1RLQ9NZP8 487 aa9.41□□□□□ -0.9
LINC00963-220ENST00000625171 IGHV3-72A0A0B4J1Y9 119 aa9.4□□□□□ -0.9
LINC00963-220ENST00000625171 FAM24AA6NFZ4 105 aa9.4□□□□□ -0.9
LINC00963-220ENST00000625171 PMS2P5A8MQ11 134 aa9.4□□□□□ -0.9
LINC00963-220ENST00000625171 COMPP49747 757 aaPredicted RBP9.4□□□□□ -0.9
LINC00963-220ENST00000625171 EWSR1Q01844 656 aaKnown RBP eCLIP9.4□□□□□ -0.91e-6■■■■□ 24.6
LINC00963-220ENST00000625171 PVRIGQ6DKI7 326 aa9.4□□□□□ -0.9
LINC00963-220ENST00000625171 ZNF767PQ75MW2 155 aa9.4□□□□□ -0.9
LINC00963-220ENST00000625171 STX12Q86Y82 276 aa9.4□□□□□ -0.9
LINC00963-220ENST00000625171 MRPL41Q8IXM3 137 aaKnown RBP9.4□□□□□ -0.9
LINC00963-220ENST00000625171 UBAC2Q8NBM4 344 aa9.4□□□□□ -0.9
LINC00963-220ENST00000625171 C17orf50Q8WW18 174 aa9.4□□□□□ -0.9
LINC00963-220ENST00000625171 CLCC1Q96S66 551 aa9.4□□□□□ -0.9
LINC00963-220ENST00000625171 GGACTQ9BVM4 153 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms