RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 UPK2O00526 184 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 RRHO14718 337 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 NXPH3O95157 252 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 RELBQ01201 579 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 PLGLAQ15195 96 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 ACOT7LQ6ZUV0 252 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 TEX45Q8NA69 505 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 NPBQ8NG41 125 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 OR4D5Q8NGN0 318 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 OR4A5Q8NH83 315 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 RNF126Q9BV68 326 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 FBXL15Q9H469 300 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 TPSG1Q9NRR2 321 aa14.24□□□□□ -0.13
PTCHD3-202ENST00000622555 PLXNB1O43157 2135 aa14.23□□□□□ -0.13
PTCHD3-202ENST00000622555 NCBP2LA6PVI3 153 aaKnown RBP14.23□□□□□ -0.13
PTCHD3-202ENST00000622555 PITX3O75364 302 aa14.23□□□□□ -0.13
PTCHD3-202ENST00000622555 IL6RP08887 468 aaPredicted RBP14.23□□□□□ -0.13
PTCHD3-202ENST00000622555 LRRC37A5PQ49AS3 106 aa14.23□□□□□ -0.13
PTCHD3-202ENST00000622555 SLC51BQ86UW2 128 aa14.23□□□□□ -0.13
PTCHD3-202ENST00000622555 TMEM167AQ8TBQ9 72 aa14.23□□□□□ -0.13
PTCHD3-202ENST00000622555 ZNF48Q96MX3 618 aaPredicted RBP14.23□□□□□ -0.13
PTCHD3-202ENST00000622555 CRYGBP07316 175 aa14.22□□□□□ -0.13
PTCHD3-202ENST00000622555 S100A10P60903 97 aa14.22□□□□□ -0.13
PTCHD3-202ENST00000622555 LY6EQ16553 131 aa14.22□□□□□ -0.13
PTCHD3-202ENST00000622555 CXorf66Q5JRM2 361 aaPredicted RBP14.22□□□□□ -0.13
PTCHD3-202ENST00000622555 Q71RC1 249 aaPredicted RBP14.22□□□□□ -0.13
PTCHD3-202ENST00000622555 TMEM219Q86XT9 240 aa14.22□□□□□ -0.13
PTCHD3-202ENST00000622555 THAP6Q8TBB0 222 aa14.22□□□□□ -0.13
PTCHD3-202ENST00000622555 QTRT1Q9BXR0 403 aaKnown RBP14.22□□□□□ -0.13
PTCHD3-202ENST00000622555 C1RLQ9NZP8 487 aa14.22□□□□□ -0.13
PTCHD3-202ENST00000622555 PRNDQ9UKY0 176 aa14.22□□□□□ -0.13
PTCHD3-202ENST00000622555 TCF19Q9Y242 345 aa14.22□□□□□ -0.13
PTCHD3-202ENST00000622555 SIGLEC9Q9Y336 463 aa14.22□□□□□ -0.13
PTCHD3-202ENST00000622555 C15orf61A6NNL5 157 aa14.21□□□□□ -0.13
PTCHD3-202ENST00000622555 H0YIZ8 118 aa14.21□□□□□ -0.13
PTCHD3-202ENST00000622555 NDUFA3O95167 84 aa14.21□□□□□ -0.13
PTCHD3-202ENST00000622555 IGHV4-59P01825 116 aa14.21□□□□□ -0.13
PTCHD3-202ENST00000622555 MBPP02686 304 aaPredicted RBP14.21□□□□□ -0.13
PTCHD3-202ENST00000622555 NKX2-1P43699 371 aaPredicted RBP14.21□□□□□ -0.13
PTCHD3-202ENST00000622555 RPL8P62917 257 aaKnown RBP14.21□□□□□ -0.13
PTCHD3-202ENST00000622555 RAB32Q13637 225 aa14.21□□□□□ -0.13
PTCHD3-202ENST00000622555 Q6YL49 198 aa14.21□□□□□ -0.13
PTCHD3-202ENST00000622555 FOXRED2Q8IWF2 684 aa14.21□□□□□ -0.13
PTCHD3-202ENST00000622555 CLCC1Q96S66 551 aa14.21□□□□□ -0.13
PTCHD3-202ENST00000622555 GSX1Q9H4S2 264 aaPredicted RBP14.21□□□□□ -0.13
PTCHD3-202ENST00000622555 ZNF430Q9H8G1 570 aaPredicted RBP14.21□□□□□ -0.13
PTCHD3-202ENST00000622555 MBD2Q9UBB5 411 aa14.21□□□□□ -0.13
PTCHD3-202ENST00000622555 ST8SIA3O43173 380 aa14.21□□□□□ -0.14
PTCHD3-202ENST00000622555 IER3P46695 156 aa14.21□□□□□ -0.14
PTCHD3-202ENST00000622555 PPP1R27Q86WC6 154 aa14.21□□□□□ -0.14
PTCHD3-202ENST00000622555 SCARB1Q8WTV0 552 aa14.21□□□□□ -0.14
PTCHD3-202ENST00000622555 SLC25A33Q9BSK2 321 aa14.21□□□□□ -0.14
PTCHD3-202ENST00000622555 TMEM14BQ9NUH8 114 aa14.21□□□□□ -0.14
PTCHD3-202ENST00000622555 FOXA2Q9Y261 457 aaPredicted RBP14.21□□□□□ -0.14
PTCHD3-202ENST00000622555 LSM5Q9Y4Y9 91 aaKnown RBP14.21□□□□□ -0.14
PTCHD3-202ENST00000622555 A6NDX4 124 aa14.2□□□□□ -0.14
PTCHD3-202ENST00000622555 BTBD17A6NE02 478 aa14.2□□□□□ -0.14
PTCHD3-202ENST00000622555 PJVKQ0ZLH3 352 aa14.2□□□□□ -0.14
PTCHD3-202ENST00000622555 PRSS8Q16651 343 aa14.2□□□□□ -0.14
PTCHD3-202ENST00000622555 C5orf64Q2M2E5 130 aa14.2□□□□□ -0.14
PTCHD3-202ENST00000622555 MMD2Q8IY49 270 aa14.2□□□□□ -0.14
PTCHD3-202ENST00000622555 SIGLECL1Q8N7X8 197 aa14.2□□□□□ -0.14
PTCHD3-202ENST00000622555 RBM14Q96PK6 669 aaKnown RBP14.2□□□□□ -0.14
PTCHD3-202ENST00000622555 MAGT1Q9H0U3 335 aa14.2□□□□□ -0.14
PTCHD3-202ENST00000622555 PRDM13Q9H4Q3 707 aa14.2□□□□□ -0.14
PTCHD3-202ENST00000622555 PITPNC1Q9UKF7 332 aa14.2□□□□□ -0.14
PTCHD3-202ENST00000622555 CDC42EP3Q9UKI2 254 aa14.2□□□□□ -0.14
PTCHD3-202ENST00000622555 OR51B2Q9Y5P1 312 aa14.2□□□□□ -0.14
PTCHD3-202ENST00000622555 MXRA5Q9NR99 2828 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 MTORP42345 2549 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 F8P00451 2351 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 BCL2L11O43521 198 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 IFNA17P01571 189 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 MYOD1P15172 320 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 ID3Q02535 119 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 SCGB2A2Q13296 93 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 MRGPRG-AS1Q2M3A8 158 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 PRSS54Q6PEW0 395 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 ZNF429Q86V71 674 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 OR5R1Q8NH85 324 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 TNFRSF19Q9NS68 423 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 FKBP11Q9NYL4 201 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 MOB4Q9Y3A3 225 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 POMT1Q9Y6A1 747 aa14.19□□□□□ -0.14
PTCHD3-202ENST00000622555 FAM90A26D6RGX4 464 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 K7EPK0 472 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 WRBO00258 174 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 ACTL6BO94805 426 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 OPN1MWP04001 364 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 OPN1MW2P0DN77 364 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 OPN1MW3P0DN78 364 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 SRD5A1P18405 259 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 RAB14P61106 215 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 POLR2GP62487 172 aaKnown RBP eCLIP14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 GNB1P62873 340 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 UBA52P62987 128 aaKnown RBP14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 TNFRSF9Q07011 255 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 AARDQ4LEZ3 155 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 SPINK9Q5DT21 86 aa14.18□□□□□ -0.14
PTCHD3-202ENST00000622555 FAM71E2Q8N5Q1 922 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms