RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	BORCS7	Q96B45	105 aa		11.98	□□□□□ -0.49
SYNRG-231	ENST00000622045	ABI3	Q9P2A4	366 aa		11.98	□□□□□ -0.49
SYNRG-231	ENST00000622045	HBZ	P02008	142 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	PSPN	O60542	156 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	FOXH1	O75593	365 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	TFF1	P04155	84 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	OR1C1	Q15619	314 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	ALKBH6	Q3KRA9	238 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	PMS2CL	Q68D20	193 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	ZNF826P	Q6ZT77	177 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	ZBTB34	Q8NCN2	500 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	HEYL	Q9NQ87	328 aa	Predicted RBP	11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	NTN3	O00634	580 aa	Predicted RBP	11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	VHLL	Q6RSH7	139 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	WDR86	Q86TI4	376 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	TCTEX1D1	Q8N7M0	179 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	MAFA	Q8NHW3	353 aa	Predicted RBP	11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	C5orf30	Q96GV9	206 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	KCNS1	Q96KK3	526 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	TTTY12	Q9BZ98	90 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	PSG11	Q9UQ72	335 aa		11.97	□□□□□ -0.49
SYNRG-231	ENST00000622045	ACTL6B	O94805	426 aa		11.96	□□□□□ -0.49
SYNRG-231	ENST00000622045	SLC35D1	Q9NTN3	355 aa		11.96	□□□□□ -0.49
SYNRG-231	ENST00000622045	MBNL3	Q9NUK0	354 aa	Known RBP	11.96	□□□□□ -0.49
SYNRG-231	ENST00000622045	WNT9B	O14905	357 aa		11.96	□□□□□ -0.49
SYNRG-231	ENST00000622045	NEURL1	O76050	574 aa		11.96	□□□□□ -0.49
SYNRG-231	ENST00000622045	CA2	P00918	260 aa		11.96	□□□□□ -0.49
SYNRG-231	ENST00000622045	TMEM251	Q8N6I4	163 aa		11.96	□□□□□ -0.49
SYNRG-231	ENST00000622045		Q8N7P7	452 aa		11.96	□□□□□ -0.49
SYNRG-231	ENST00000622045	CLEC7A	Q9BXN2	247 aa		11.96	□□□□□ -0.49
SYNRG-231	ENST00000622045	C15orf62	A8K5M9	175 aa		11.96	□□□□□ -0.5
SYNRG-231	ENST00000622045	SS18L1	O75177	396 aa	Predicted RBP	11.96	□□□□□ -0.5
SYNRG-231	ENST00000622045	ZNF324	O75467	553 aa	Predicted RBP	11.96	□□□□□ -0.5
SYNRG-231	ENST00000622045	CA1	P00915	261 aa	Predicted RBP	11.96	□□□□□ -0.5
SYNRG-231	ENST00000622045	STUM	Q69YW2	141 aa		11.96	□□□□□ -0.5
SYNRG-231	ENST00000622045	NIT1	Q86X76	327 aa		11.96	□□□□□ -0.5
SYNRG-231	ENST00000622045	KLHDC1	Q8N7A1	406 aa		11.96	□□□□□ -0.5
SYNRG-231	ENST00000622045	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.96	□□□□□ -0.5
SYNRG-231	ENST00000622045	LOXL2	Q9Y4K0	774 aa		11.96	□□□□□ -0.5
SYNRG-231	ENST00000622045	CELA3B	P08861	270 aa		11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	LDLRAD2	Q5SZI1	272 aa		11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	DEFB127	Q9H1M4	99 aa		11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	WDR83OS	Q9Y284	106 aa		11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	PRRX1	P54821	245 aa		11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	EAF1	Q96JC9	268 aa	Predicted RBP	11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	OOEP	A6NGQ2	149 aa		11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	RAB29	O14966	203 aa		11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	MGST1	P10620	155 aa	Known RBP	11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	PRAMEF5	Q5TYX0	476 aa		11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	PRAMEF6	Q5VXH4	476 aa		11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	PQLC2	Q6ZP29	291 aa		11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	TAAR6	Q96RI8	345 aa		11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	SEPSECS	Q9HD40	501 aa	Known RBP	11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	SELENOK	Q9Y6D0	94 aa		11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	NBEA	Q8NFP9	2946 aa		11.95	□□□□□ -0.5
SYNRG-231	ENST00000622045	EDDM3A	Q14507	147 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	LPAL2	Q16609	132 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	VKORC1L1	Q8N0U8	176 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	OR4A16	Q8NH70	328 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	SLC25A40	Q8TBP6	338 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	MS4A5	Q9H3V2	200 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	GCM1	Q9NP62	436 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	FCGR3B	O75015	233 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	IGHV3-13	P01766	116 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	IGHV3-7	P01780	117 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	SSTR5	P35346	364 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	ZNF146	Q15072	292 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	NHLRC2	Q8NBF2	726 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	TSKU	Q8WUA8	353 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045		V9GYV3	84 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	CXorf1	O96002	111 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	CGA	P01215	116 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	TNFSF4	P23510	183 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	BRWD1-AS2	P59051	145 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	TRIP6	Q15654	476 aa	Known RBP	11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	CENPW	Q5EE01	88 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	OR4P4	Q8NGL7	312 aa		11.94	□□□□□ -0.5
SYNRG-231	ENST00000622045	MAP1B	P46821	2468 aa	Known RBP	11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	CRYBB3	P26998	211 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	GCHFR	P30047	84 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	AARD	Q4LEZ3	155 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	ABHD12	Q8N2K0	398 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	MGST2	Q99735	147 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	SFXN3	Q9BWM7	321 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	PRR14L	Q5THK1	2151 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	BMPR1B	O00238	502 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	STAG3L2	P0CL84	134 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	STAG3L3	P0CL85	134 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	GNG4	P50150	75 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	TMEM136	Q6ZRR5	245 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	GNG12	Q9UBI6	72 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	SVIL	O95425	2214 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045		K7EP13	123 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	ERVK11-1	P61568	191 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	TREML4	Q6UXN2	200 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	GNB1L	Q9BYB4	327 aa		11.93	□□□□□ -0.5
SYNRG-231	ENST00000622045	LINC00473	A8K010	186 aa		11.92	□□□□□ -0.5
SYNRG-231	ENST00000622045	TOMM40	O96008	361 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms