RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 ZNF329Q86UD4 541 aa8.59□□□□□ -1.03
POLR2J3-221ENST00000621093 FOXRED2Q8IWF2 684 aa8.59□□□□□ -1.03
POLR2J3-221ENST00000621093 LGI3Q8N145 548 aa8.59□□□□□ -1.03
POLR2J3-221ENST00000621093 OR4A5Q8NH83 315 aa8.59□□□□□ -1.03
POLR2J3-221ENST00000621093 RNASE11Q8TAA1 199 aaKnown RBP8.59□□□□□ -1.03
POLR2J3-221ENST00000621093 SRSF12Q8WXF0 261 aaKnown RBP8.59□□□□□ -1.03
POLR2J3-221ENST00000621093 PALMDQ9NP74 551 aa8.59□□□□□ -1.03
POLR2J3-221ENST00000621093 TRAV41A0A0B4J266 112 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 A0A0B4J293 547 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 TEX50A0A1B0GTY4 177 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 MSGN1A6NI15 193 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 AP4M1O00189 453 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 IGF1P05019 195 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 HOXB5P09067 269 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 RPL27AP46776 148 aaKnown RBP8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 C19orf54Q5BKX5 351 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 UNQ5815/PRO19632Q6UWF5 114 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 CENPVQ7Z7K6 275 aaPredicted RBP8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 C11orf44Q8N8P7 122 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 LFNGQ8NES3 379 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 SGMS2Q8NHU3 365 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 WIPF2Q8TF74 440 aaPredicted RBP8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 WFDC12Q8WWY7 111 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 IL22RA2Q969J5 263 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 FYTTD1Q96QD9 318 aaKnown RBP8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 PHB2Q99623 299 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 QTRT1Q9BXR0 403 aaKnown RBP8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 ALX4Q9H161 411 aaPredicted RBP8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 OR51B2Q9Y5P1 312 aa8.58□□□□□ -1.04
POLR2J3-221ENST00000621093 A0A0B4J2A0 478 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 A0A1B0GUS0 222 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 PSMB11A5LHX3 300 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 C15orf61A6NNL5 157 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 TEX22C9J3V5 150 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 SOX15O60248 233 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 ADAP1O75689 374 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 SNAPC5O75971 98 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 ACTL6BO94805 426 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 NXPH3O95157 252 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 DUS4LO95620 317 aaKnown RBP8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 PTTG1O95997 202 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 IL5P05113 134 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 CD28P10747 220 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 MAS1LP35410 378 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 CRIP2P52943 208 aaPredicted RBP8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 CFHR3Q02985 330 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 SPINK9Q5DT21 86 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 NMSQ5H8A3 153 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 C12orf54Q6X4T0 127 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 C19orf35Q6ZS72 473 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 LCNL1Q6ZST4 164 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 CADM3Q8N126 398 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 LRTM2Q8N967 370 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 OR5T1Q8NG75 326 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 OR5AU1Q8NGC0 362 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 OR10W1Q8NGF6 305 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 OR4A16Q8NH70 328 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 ZNF431Q8TF32 576 aaPredicted RBP8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 RRNAD1Q96FB5 475 aaKnown RBP8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 MARVELD1Q9BSK0 173 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 CACNG5Q9UF02 275 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 SHPKQ9UHJ6 478 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 ATRQ13535 2644 aa8.57□□□□□ -1.04
POLR2J3-221ENST00000621093 A0A1W2PN81 502 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 MPTX1A8MV57 137 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 CCSO14618 274 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 ST8SIA3O43173 380 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 CREBL2O60519 120 aaPredicted RBP8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 ATG12O94817 140 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 REG1AP05451 166 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 AREGP15514 252 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 VDAC1P21796 283 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 PPIFP30405 207 aaKnown RBP8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 CHRNA7P36544 502 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 SRPXP78539 464 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 TCTEX1D4Q5JR98 221 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 GGNBP1Q5YKI7 109 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 C11orf87Q6NUJ2 197 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 UXS1Q8NBZ7 420 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 COQ8AQ8NI60 647 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 CHPT1Q8WUD6 406 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 MITD1Q8WV92 249 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 LSM10Q969L4 123 aaKnown RBP8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 HINT2Q9BX68 163 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 COMMD5Q9GZQ3 224 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 TMEM14BQ9NUH8 114 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 PRNDQ9UKY0 176 aa8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 FOXA2Q9Y261 457 aaPredicted RBP8.56□□□□□ -1.04
POLR2J3-221ENST00000621093 RBMXL2O75526 392 aaKnown RBP8.55□□□□□ -1.04
POLR2J3-221ENST00000621093 DEFA5Q01523 94 aa8.55□□□□□ -1.04
POLR2J3-221ENST00000621093 RGS21Q2M5E4 152 aa8.55□□□□□ -1.04
POLR2J3-221ENST00000621093 C2orf68Q2NKX9 166 aa8.55□□□□□ -1.04
POLR2J3-221ENST00000621093 KRTAP21-3Q3LHN1 58 aa8.55□□□□□ -1.04
POLR2J3-221ENST00000621093 AKIRIN2Q53H80 203 aa8.55□□□□□ -1.04
POLR2J3-221ENST00000621093 FAM219AQ8IW50 185 aa8.55□□□□□ -1.04
POLR2J3-221ENST00000621093 C12orf45Q8N5I9 185 aaPredicted RBP8.55□□□□□ -1.04
POLR2J3-221ENST00000621093 MINDY2Q8NBR6 621 aa8.55□□□□□ -1.04
POLR2J3-221ENST00000621093 OR1L8Q8NGR8 309 aa8.55□□□□□ -1.04
POLR2J3-221ENST00000621093 KLK15Q9H2R5 256 aa8.55□□□□□ -1.04
POLR2J3-221ENST00000621093 NDUFA4L2Q9NRX3 87 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms