RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 C11orf87Q6NUJ2 197 aa12.77□□□□□ -0.37
CD40-207ENST00000620709 OR4X2Q8NGF9 303 aa12.77□□□□□ -0.37
CD40-207ENST00000620709 THAP6Q8TBB0 222 aa12.77□□□□□ -0.37
CD40-207ENST00000620709 LSM10Q969L4 123 aaKnown RBP12.77□□□□□ -0.37
CD40-207ENST00000620709 HMSDA8MTL9 139 aa12.76□□□□□ -0.37
CD40-207ENST00000620709 LY6LH3BQJ8 138 aa12.76□□□□□ -0.37
CD40-207ENST00000620709 RBFOX2O43251 390 aaKnown RBP eCLIP12.76□□□□□ -0.37
CD40-207ENST00000620709 SLC25A4P12235 298 aa12.76□□□□□ -0.37
CD40-207ENST00000620709 IGLL1P15814 213 aa12.76□□□□□ -0.37
CD40-207ENST00000620709 IL3RAP26951 378 aa12.76□□□□□ -0.37
CD40-207ENST00000620709 ZNF816Q0VGE8 651 aaPredicted RBP12.76□□□□□ -0.37
CD40-207ENST00000620709 HNF4GQ14541 408 aa12.76□□□□□ -0.37
CD40-207ENST00000620709 C10orf99Q6UWK7 81 aa12.76□□□□□ -0.37
CD40-207ENST00000620709 ZNF833PQ6ZTB9 187 aa12.76□□□□□ -0.37
CD40-207ENST00000620709 REC114Q7Z4M0 266 aa12.76□□□□□ -0.37
CD40-207ENST00000620709 C9orf62Q8N4C0 152 aa12.76□□□□□ -0.37
CD40-207ENST00000620709 DRAXINQ8NBI3 349 aaPredicted RBP12.76□□□□□ -0.37
CD40-207ENST00000620709 RRNAD1Q96FB5 475 aaKnown RBP12.76□□□□□ -0.37
CD40-207ENST00000620709 ZFP57Q9NU63 452 aa12.76□□□□□ -0.37
CD40-207ENST00000620709 DNAH3Q8TD57 4116 aa12.75□□□□□ -0.37
CD40-207ENST00000620709 OOSP1A8MZH6 123 aa12.75□□□□□ -0.37
CD40-207ENST00000620709 RAMP3O60896 148 aa12.75□□□□□ -0.37
CD40-207ENST00000620709 FCGR3BO75015 233 aa12.75□□□□□ -0.37
CD40-207ENST00000620709 S1PR2O95136 353 aa12.75□□□□□ -0.37
CD40-207ENST00000620709 SNRNP70P08621 437 aaKnown RBP12.75□□□□□ -0.37
CD40-207ENST00000620709 SLC25A6P12236 298 aa12.75□□□□□ -0.37
CD40-207ENST00000620709 ZNF137PP52743 207 aa12.75□□□□□ -0.37
CD40-207ENST00000620709 BRWD1-AS2P59051 145 aa12.75□□□□□ -0.37
CD40-207ENST00000620709 TCTEX1D4Q5JR98 221 aa12.75□□□□□ -0.37
CD40-207ENST00000620709 DDB2Q92466 427 aa12.75□□□□□ -0.37
CD40-207ENST00000620709 MOB4Q9Y3A3 225 aa12.75□□□□□ -0.37
CD40-207ENST00000620709 HSPB11Q9Y547 144 aa12.75□□□□□ -0.37
CD40-207ENST00000620709 TSSC4Q9Y5U2 329 aaPredicted RBP12.75□□□□□ -0.37
CD40-207ENST00000620709 AMY1AP04745 511 aa12.74□□□□□ -0.37
CD40-207ENST00000620709 LINC00205P59089 165 aa12.74□□□□□ -0.37
CD40-207ENST00000620709 S100A10P60903 97 aa12.74□□□□□ -0.37
CD40-207ENST00000620709 RAB32Q13637 225 aa12.74□□□□□ -0.37
CD40-207ENST00000620709 DIAPH2-AS1Q14236 149 aa12.74□□□□□ -0.37
CD40-207ENST00000620709 TMEM65Q6PI78 240 aa12.74□□□□□ -0.37
CD40-207ENST00000620709 FAM219AQ8IW50 185 aa12.74□□□□□ -0.37
CD40-207ENST00000620709 OR4D5Q8NGN0 318 aa12.74□□□□□ -0.37
CD40-207ENST00000620709 OR4S2Q8NH73 311 aa12.74□□□□□ -0.37
CD40-207ENST00000620709 PLEKHA2Q9HB19 425 aa12.74□□□□□ -0.37
CD40-207ENST00000620709 MBD2Q9UBB5 411 aa12.74□□□□□ -0.37
CD40-207ENST00000620709 A0A1B0GU03 582 aa12.73□□□□□ -0.37
CD40-207ENST00000620709 M0QZK8 103 aa12.73□□□□□ -0.37
CD40-207ENST00000620709 ARPC5O15511 151 aa12.73□□□□□ -0.37
CD40-207ENST00000620709 SCGB1D2O95969 90 aa12.73□□□□□ -0.37
CD40-207ENST00000620709 HPRT1P00492 218 aa12.73□□□□□ -0.37
CD40-207ENST00000620709 IGKV1-5P01602 117 aa12.73□□□□□ -0.37
CD40-207ENST00000620709 TMEM11P17152 192 aa12.73□□□□□ -0.37
CD40-207ENST00000620709 SMCO1Q147U7 214 aa12.73□□□□□ -0.37
CD40-207ENST00000620709 LAMTOR1Q6IAA8 161 aa12.73□□□□□ -0.37
CD40-207ENST00000620709 PRSS54Q6PEW0 395 aa12.73□□□□□ -0.37
CD40-207ENST00000620709 ZNF546Q86UE3 836 aa12.73□□□□□ -0.37
CD40-207ENST00000620709 ZNF383Q8NA42 475 aa12.73□□□□□ -0.37
CD40-207ENST00000620709 GPR146Q96CH1 333 aa12.73□□□□□ -0.37
CD40-207ENST00000620709 AURKAIP1Q9NWT8 199 aaPredicted RBP12.73□□□□□ -0.37
CD40-207ENST00000620709 A0A0G2JRQ6 117 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 PSMB11A5LHX3 300 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 RLN2P04090 185 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 TAGLNQ01995 201 aaKnown RBP12.72□□□□□ -0.37
CD40-207ENST00000620709 MOB3BQ86TA1 216 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 ZNF329Q86UD4 541 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 ST6GALNAC6Q969X2 333 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 IGKV1D-33P01593 117 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 IGKV1-33P01594 117 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 APOA2P02652 100 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 MBPP02686 304 aaPredicted RBP12.72□□□□□ -0.37
CD40-207ENST00000620709 CT45A6P0DMU7 189 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 CT45A5P0DMU8 189 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 CT45A7P0DMV0 189 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 RRASP10301 218 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 LYL1P12980 280 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 C4BPBP20851 252 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 G6PCP35575 357 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 NKX2-1P43699 371 aaPredicted RBP12.72□□□□□ -0.37
CD40-207ENST00000620709 REG1BP48304 166 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 ERVK-16P61578 105 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 RTL8BQ17RB0 113 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 LGALSLQ3ZCW2 172 aaPredicted RBP12.72□□□□□ -0.37
CD40-207ENST00000620709 OR1S1Q8NH92 325 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 DCUN1D4Q92564 292 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 MRPL20Q9BYC9 149 aaKnown RBP12.72□□□□□ -0.37
CD40-207ENST00000620709 PLSCR3Q9NRY6 295 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 SLC35D1Q9NTN3 355 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 BOLA1Q9Y3E2 137 aa12.72□□□□□ -0.37
CD40-207ENST00000620709 LSM5Q9Y4Y9 91 aaKnown RBP12.72□□□□□ -0.37
CD40-207ENST00000620709 A0A1W2PPI3 338 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 MARCH11A6NNE9 402 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 H0YIZ8 118 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 K7EPK0 472 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 L7N2F9 121 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 ST8SIA3O43173 380 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 DEDDO75618 318 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 KRASP01116 189 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 H2BFWTQ7Z2G1 175 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 THNSL2Q86YJ6 484 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 TGIF2LXQ8IUE1 241 aa12.71□□□□□ -0.38
CD40-207ENST00000620709 FOXRED2Q8IWF2 684 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms