RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 LINC00312Q9Y6C7 94 aa17.09■□□□□ 0.33
FGFR1-241ENST00000619564 RBBP6Q7Z6E9 1792 aaKnown RBP17.09■□□□□ 0.33
FGFR1-241ENST00000619564 TMEM262E9PQX1 116 aa17.09■□□□□ 0.33
FGFR1-241ENST00000619564 PAPPA-AS1Q5QFB9 102 aa17.09■□□□□ 0.33
FGFR1-241ENST00000619564 RBFOX2O43251 390 aaKnown RBP eCLIP17.09■□□□□ 0.337e-7■■■■■ 28.8
FGFR1-241ENST00000619564 CD69Q07108 199 aa17.09■□□□□ 0.33
FGFR1-241ENST00000619564 ZNF256Q9Y2P7 627 aaPredicted RBP17.09■□□□□ 0.33
FGFR1-241ENST00000619564 REPIN1Q9BWE0 567 aaKnown RBP17.09■□□□□ 0.33
FGFR1-241ENST00000619564 SH3BGRL3Q9H299 93 aa17.09■□□□□ 0.33
FGFR1-241ENST00000619564 H7C2G1 150 aa17.08■□□□□ 0.33
FGFR1-241ENST00000619564 NMBP08949 121 aa17.08■□□□□ 0.33
FGFR1-241ENST00000619564 C1QL2Q7Z5L3 287 aa17.08■□□□□ 0.33
FGFR1-241ENST00000619564 GEMIN7Q9H840 131 aaKnown RBP17.08■□□□□ 0.33
FGFR1-241ENST00000619564 CBLN4Q9NTU7 201 aa17.08■□□□□ 0.33
FGFR1-241ENST00000619564 C21orf62Q9NYP8 219 aa17.08■□□□□ 0.33
FGFR1-241ENST00000619564 CA7P43166 264 aa17.08■□□□□ 0.33
FGFR1-241ENST00000619564 LHX2P50458 406 aa17.08■□□□□ 0.33
FGFR1-241ENST00000619564 ITLN2Q8WWU7 325 aaPredicted RBP17.08■□□□□ 0.32
FGFR1-241ENST00000619564 TRIOBPQ9H2D6 2365 aa17.08■□□□□ 0.32
FGFR1-241ENST00000619564 LOC102723996A0A087X1L8 192 aa17.08■□□□□ 0.32
FGFR1-241ENST00000619564 IGHV3-49A0A0A0MS15 119 aa17.08■□□□□ 0.32
FGFR1-241ENST00000619564 IL6RP08887 468 aaPredicted RBP17.08■□□□□ 0.32
FGFR1-241ENST00000619564 ZNF25P17030 456 aaPredicted RBP17.08■□□□□ 0.32
FGFR1-241ENST00000619564 AGAP20933 346 aa17.08■□□□□ 0.32
FGFR1-241ENST00000619564 PKIAP61925 76 aa17.08■□□□□ 0.32
FGFR1-241ENST00000619564 FOXA2Q9Y261 457 aaPredicted RBP17.08■□□□□ 0.32
FGFR1-241ENST00000619564 RRHO14718 337 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 ICAM4Q14773 271 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 OR4A47Q6IF82 309 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 RND3P61587 244 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 MEIG1Q5JSS6 88 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 PSMG3Q9BT73 122 aaPredicted RBP17.07■□□□□ 0.32
FGFR1-241ENST00000619564 TMEM70Q9BUB7 260 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 IGHV3-66A0A0C4DH42 116 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 C9JCJ5 164 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 H0YL77 283 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 PPP1R17O96001 155 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 RPLP1P05386 114 aaKnown RBP17.07■□□□□ 0.32
FGFR1-241ENST00000619564 CELA3BP08861 270 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 ABLIM2Q6H8Q1 611 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 JMJD8Q96S16 334 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 RARRES2Q99969 163 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 S4R3C0 116 aa17.07■□□□□ 0.32
FGFR1-241ENST00000619564 TRGC2P03986 189 aa17.06■□□□□ 0.32
FGFR1-241ENST00000619564 GPR183P32249 361 aa17.06■□□□□ 0.32
FGFR1-241ENST00000619564 HIST1H2BAQ96A08 127 aa17.06■□□□□ 0.32
FGFR1-241ENST00000619564 KLK15Q9H2R5 256 aa17.06■□□□□ 0.32
FGFR1-241ENST00000619564 H7C1H1 209 aa17.06■□□□□ 0.32
FGFR1-241ENST00000619564 EIF3GO75821 320 aaKnown RBP eCLIP17.06■□□□□ 0.32
FGFR1-241ENST00000619564 PRSS2P07478 247 aa17.06■□□□□ 0.32
FGFR1-241ENST00000619564 TAF1LQ8IZX4 1826 aa17.06■□□□□ 0.32
FGFR1-241ENST00000619564 SPACA3Q8IXA5 215 aa17.06■□□□□ 0.32
FGFR1-241ENST00000619564 GGACTQ9BVM4 153 aa17.06■□□□□ 0.32
FGFR1-241ENST00000619564 MRPL20Q9BYC9 149 aaKnown RBP17.06■□□□□ 0.32
FGFR1-241ENST00000619564 C2orf68Q2NKX9 166 aa17.06■□□□□ 0.32
FGFR1-241ENST00000619564 NPFFR1Q9GZQ6 430 aa17.06■□□□□ 0.32
FGFR1-241ENST00000619564 DANCRP0C864 163 aa17.05■□□□□ 0.32
FGFR1-241ENST00000619564 H2BFSP57053 126 aa17.05■□□□□ 0.32
FGFR1-241ENST00000619564 TAS2R60P59551 318 aa17.05■□□□□ 0.32
FGFR1-241ENST00000619564 PEMTQ9UBM1 199 aa17.05■□□□□ 0.32
FGFR1-241ENST00000619564 PMCHL1Q16048 86 aa17.05■□□□□ 0.32
FGFR1-241ENST00000619564 OR10AG1Q8NH19 301 aa17.05■□□□□ 0.32
FGFR1-241ENST00000619564 CCDC88CQ9P219 2028 aa17.05■□□□□ 0.32
FGFR1-241ENST00000619564 TRBV20OR9-2A0A075B6H5 130 aa17.05■□□□□ 0.32
FGFR1-241ENST00000619564 ZFP36L1Q07352 338 aaKnown RBP17.04■□□□□ 0.32
FGFR1-241ENST00000619564 TEX45Q8NA69 505 aa17.04■□□□□ 0.32
FGFR1-241ENST00000619564 PARLQ9H300 379 aa17.04■□□□□ 0.32
FGFR1-241ENST00000619564 CLEC19AQ6UXS0 136 aa17.04■□□□□ 0.32
FGFR1-241ENST00000619564 C17orf98A8MV24 154 aa17.04■□□□□ 0.32
FGFR1-241ENST00000619564 NPIPB7O75200 414 aa17.04■□□□□ 0.32
FGFR1-241ENST00000619564 ASIPP42127 132 aa17.04■□□□□ 0.32
FGFR1-241ENST00000619564 ZNF837Q96EG3 531 aaPredicted RBP17.04■□□□□ 0.32
FGFR1-241ENST00000619564 E9PLN8 166 aa17.04■□□□□ 0.32
FGFR1-241ENST00000619564 NBEAP1P0C6P0 100 aa17.04■□□□□ 0.32
FGFR1-241ENST00000619564 VKORC1Q9BQB6 163 aa17.04■□□□□ 0.32
FGFR1-241ENST00000619564 MRPS16Q9Y3D3 137 aaKnown RBP17.04■□□□□ 0.32
FGFR1-241ENST00000619564 CKAP5Q14008 2032 aa17.04■□□□□ 0.32
FGFR1-241ENST00000619564 A0A1W2PRX2 142 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 SRIP30626 198 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 TMEM101Q96IK0 257 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 FAM186AA6NE01 2351 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 DNLZQ5SXM8 178 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 LINC00114Q6XXX2 140 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 ERASQ7Z444 233 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 DUX3Q96PT4 197 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 NPCDR1Q9BY65 106 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 LOC107984156A0A0G2JMH3 177 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 CENPWQ5EE01 88 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 ARL17AQ8IVW1 177 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 AICDAQ9GZX7 198 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 TNFRSF18Q9Y5U5 241 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 CEP290O15078 2479 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.03■□□□□ 0.32
FGFR1-241ENST00000619564 COLCA1Q6ZS62 124 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 HIST1H4GQ99525 98 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 SEMA5BQ9P283 1151 aa17.03■□□□□ 0.32
FGFR1-241ENST00000619564 SFRP2Q96HF1 295 aa17.02■□□□□ 0.32
FGFR1-241ENST00000619564 PROB1E7EW31 1015 aa17.02■□□□□ 0.32
FGFR1-241ENST00000619564 UQCRFS1P47985 274 aa17.02■□□□□ 0.32
FGFR1-241ENST00000619564 LY6DQ14210 128 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms