RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 TSKUQ8WUA8 353 aa13.26□□□□□ -0.29
SEMA3B-214ENST00000619119 DEFB127Q9H1M4 99 aa13.26□□□□□ -0.29
SEMA3B-214ENST00000619119 SLC22A20A6NK97 555 aa13.25□□□□□ -0.29
SEMA3B-214ENST00000619119 HAND1O96004 215 aa13.25□□□□□ -0.29
SEMA3B-214ENST00000619119 SERPINE2P07093 398 aa13.25□□□□□ -0.29
SEMA3B-214ENST00000619119 OTX1P32242 354 aaPredicted RBP13.25□□□□□ -0.29
SEMA3B-214ENST00000619119 SVILO95425 2214 aa13.25□□□□□ -0.29
SEMA3B-214ENST00000619119 RAMP3O60896 148 aa13.25□□□□□ -0.29
SEMA3B-214ENST00000619119 AZU1P20160 251 aa13.25□□□□□ -0.29
SEMA3B-214ENST00000619119 GRB2P62993 217 aaKnown RBP13.25□□□□□ -0.29
SEMA3B-214ENST00000619119 OR2AE1Q8NHA4 323 aa13.25□□□□□ -0.29
SEMA3B-214ENST00000619119 OCC1Q8TAD7 63 aa13.25□□□□□ -0.29
SEMA3B-214ENST00000619119 PRRG4Q9BZD6 226 aa13.25□□□□□ -0.29
SEMA3B-214ENST00000619119 CUL9Q8IWT3 2517 aa13.25□□□□□ -0.29
SEMA3B-214ENST00000619119 M0R135 149 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 CCL11P51671 97 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 ODF1Q14990 250 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 RSPO1Q2MKA7 263 aaPredicted RBP13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 C19orf35Q6ZS72 473 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 ZNF799Q96GE5 643 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 NAA38Q9BRA0 125 aaKnown RBP13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 PEF1Q9UBV8 284 aaKnown RBP13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 ARL2-SNX15V9GYD0 113 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 MGAQ8IWI9 3026 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 SP1P08047 785 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 CEACAM3P40198 252 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 TCF15Q12870 199 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 ASCL4Q6XD76 172 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 STXBP6Q8NFX7 210 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 OR10W1Q8NGF6 305 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 OR4P4Q8NGL7 312 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 FGFBP3Q8TAT2 258 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 DIDO1Q9BTC0 2240 aaKnown RBP13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 CD300LBA8K4G0 201 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 ZNF32P17041 273 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 CCL1P22362 96 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 PPOXP50336 477 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 LGALS4P56470 323 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 TUSC5Q8IXB3 177 aa13.24□□□□□ -0.29
SEMA3B-214ENST00000619119 LRP5LA4QPB2 252 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 DNPH1O43598 174 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 TCL1AP56279 114 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 FOXB1Q99853 325 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 QTRT1Q9BXR0 403 aaKnown RBP13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 TMEM38BQ9NVV0 291 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 THYN1Q9P016 225 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 CACNA1GO43497 2377 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 A0A096LPE4 126 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 A0A1W2PPZ6 126 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 MRPL33O75394 65 aaKnown RBP13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 SSTR5P35346 364 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 TGFBR3Q03167 851 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 PSG7Q13046 419 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 GABRA6Q16445 453 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 FAM27BQ5VT28 67 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 MMD2Q8IY49 270 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 GP6Q9HCN6 339 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 PLSCR4Q9NRQ2 329 aa13.23□□□□□ -0.29
SEMA3B-214ENST00000619119 TRAV26-1A0A087WT03 109 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 WT1P19544 449 aaPredicted RBP13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 EBLN2Q6P2I7 272 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 ZNF439Q8NDP4 499 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 SFXN3Q9BWM7 321 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 SCO2A0A1W2PP80 73 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 PDE6DO43924 150 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 GPR6P46095 362 aaPredicted RBP13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 RAB9AP51151 201 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 TFF3Q07654 80 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 IGFBP7Q16270 282 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 ATP6V0BQ99437 205 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 SAA2-SAA4A0A096LPE2 208 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 hDV102S1A0JD36 115 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 H0YJW9 148 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 PSG2P11465 335 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 NPY1RP25929 384 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 FOXG1P55316 489 aaPredicted RBP13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 RPEL1Q2QD12 228 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 OR10J3Q5JRS4 329 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 CPT1CQ8TCG5 803 aa13.22□□□□□ -0.29
SEMA3B-214ENST00000619119 A0A087X0K7 114 aa13.21□□□□□ -0.29
SEMA3B-214ENST00000619119 FAM231BA6NCW3 169 aa13.21□□□□□ -0.29
SEMA3B-214ENST00000619119 HSBP1O75506 76 aa13.21□□□□□ -0.29
SEMA3B-214ENST00000619119 CLDN1O95832 211 aa13.21□□□□□ -0.29
SEMA3B-214ENST00000619119 COX5AP20674 150 aa13.21□□□□□ -0.29
SEMA3B-214ENST00000619119 MRPL54Q6P161 138 aaKnown RBP13.21□□□□□ -0.29
SEMA3B-214ENST00000619119 SPATA12Q7Z6I5 190 aa13.21□□□□□ -0.29
SEMA3B-214ENST00000619119 SPTSSAQ969W0 71 aa13.21□□□□□ -0.29
SEMA3B-214ENST00000619119 AKAP13Q12802 2813 aa13.21□□□□□ -0.29
SEMA3B-214ENST00000619119 KLRC4-KLRK1H3BQV0 150 aa13.21□□□□□ -0.3
SEMA3B-214ENST00000619119 DEGS1O15121 323 aa13.21□□□□□ -0.3
SEMA3B-214ENST00000619119 DHRS3O75911 302 aa13.21□□□□□ -0.3
SEMA3B-214ENST00000619119 OR7C1O76099 320 aaPredicted RBP13.21□□□□□ -0.3
SEMA3B-214ENST00000619119 CCNOP22674 350 aa13.21□□□□□ -0.3
SEMA3B-214ENST00000619119 RHOBP62745 196 aa13.21□□□□□ -0.3
SEMA3B-214ENST00000619119 RNFT1Q5M7Z0 435 aa13.21□□□□□ -0.3
SEMA3B-214ENST00000619119 C12orf54Q6X4T0 127 aa13.21□□□□□ -0.3
SEMA3B-214ENST00000619119 FOXL2NBQ6ZUU3 175 aa13.21□□□□□ -0.3
SEMA3B-214ENST00000619119 KLF13Q9Y2Y9 288 aaPredicted RBP13.21□□□□□ -0.3
SEMA3B-214ENST00000619119 C7orf71A4D174 169 aa13.2□□□□□ -0.3
SEMA3B-214ENST00000619119 J3KRW8 73 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms