RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 RPP30P78346 268 aaKnown RBP20.76■□□□□ 0.91
VEGFC-202ENST00000618562 PDLIM3Q53GG5 364 aaPredicted RBP20.76■□□□□ 0.91
VEGFC-202ENST00000618562 PRAMEF5Q5TYX0 476 aa20.76■□□□□ 0.91
VEGFC-202ENST00000618562 TCEAL7Q9BRU2 100 aa20.76■□□□□ 0.91
VEGFC-202ENST00000618562 ACTR3CQ9C0K3 210 aaPredicted RBP20.76■□□□□ 0.91
VEGFC-202ENST00000618562 CBLN4Q9NTU7 201 aa20.76■□□□□ 0.91
VEGFC-202ENST00000618562 IDI2-AS1Q9NZ38 188 aa20.76■□□□□ 0.91
VEGFC-202ENST00000618562 ERVFRD-1P60508 538 aa20.76■□□□□ 0.91
VEGFC-202ENST00000618562 ERVK-16P61578 105 aa20.76■□□□□ 0.91
VEGFC-202ENST00000618562 RPL31P62899 125 aaKnown RBP20.76■□□□□ 0.91
VEGFC-202ENST00000618562 MEF2CQ06413 473 aaPredicted RBP20.76■□□□□ 0.91
VEGFC-202ENST00000618562 C11orf71Q6IPW1 123 aa20.76■□□□□ 0.91
VEGFC-202ENST00000618562 SLC25A22Q9H936 323 aa20.76■□□□□ 0.91
VEGFC-202ENST00000618562 A0A1W2PPR1 153 aa20.75■□□□□ 0.91
VEGFC-202ENST00000618562 C19orf84I3L1E1 186 aa20.75■□□□□ 0.91
VEGFC-202ENST00000618562 NDUFB3O43676 98 aa20.75■□□□□ 0.91
VEGFC-202ENST00000618562 SOD3P08294 240 aa20.75■□□□□ 0.91
VEGFC-202ENST00000618562 SPINK9Q5DT21 86 aa20.75■□□□□ 0.91
VEGFC-202ENST00000618562 ZNF343Q6P1L6 599 aa20.75■□□□□ 0.91
VEGFC-202ENST00000618562 OR4A16Q8NH70 328 aa20.75■□□□□ 0.91
VEGFC-202ENST00000618562 MANBALQ9NQG1 85 aa20.75■□□□□ 0.91
VEGFC-202ENST00000618562 SOX15O60248 233 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 NQO2P16083 231 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 PSMB3P49720 205 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 CD81P60033 236 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 RPL39P5Q59GN2 51 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 LRRC10Q5BKY1 277 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 CT45A1Q5HYN5 189 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 WDR25Q64LD2 544 aaPredicted RBP20.74■□□□□ 0.91
VEGFC-202ENST00000618562 CT45A3Q8NHU0 189 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 S1PR3Q99500 378 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 ZNF251Q9BRH9 671 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 TMEM250H0YL14 139 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 DVL1O14640 695 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 CXCL1P09341 107 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 RND2P52198 227 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.74■□□□□ 0.91
VEGFC-202ENST00000618562 WDR83OSQ9Y284 106 aa20.74■□□□□ 0.91
VEGFC-202ENST00000618562 HNF4GQ14541 408 aa20.73■□□□□ 0.91
VEGFC-202ENST00000618562 ZNF439Q8NDP4 499 aa20.73■□□□□ 0.91
VEGFC-202ENST00000618562 DDB2Q92466 427 aa20.73■□□□□ 0.91
VEGFC-202ENST00000618562 CLDN34H7C241 214 aa20.73■□□□□ 0.91
VEGFC-202ENST00000618562 TMEM200BQ69YZ2 307 aa20.73■□□□□ 0.91
VEGFC-202ENST00000618562 RPUSD1Q9UJJ7 312 aaKnown RBP20.73■□□□□ 0.91
VEGFC-202ENST00000618562 URGCP-MRPS24S4R325 110 aa20.73■□□□□ 0.91
VEGFC-202ENST00000618562 ACOT6Q3I5F7 207 aaPredicted RBP20.72■□□□□ 0.91
VEGFC-202ENST00000618562 C1orf229Q6ZS94 237 aaPredicted RBP20.72■□□□□ 0.91
VEGFC-202ENST00000618562 OR4S2Q8NH73 311 aa20.72■□□□□ 0.91
VEGFC-202ENST00000618562 H1FXQ92522 213 aaKnown RBP20.72■□□□□ 0.91
VEGFC-202ENST00000618562 GGACTQ9BVM4 153 aa20.72■□□□□ 0.91
VEGFC-202ENST00000618562 CTDSP1Q9GZU7 261 aa20.72■□□□□ 0.91
VEGFC-202ENST00000618562 NAT8Q9UHE5 227 aa20.72■□□□□ 0.91
VEGFC-202ENST00000618562 CYB5BO43169 146 aa20.71■□□□□ 0.91
VEGFC-202ENST00000618562 MPDU1O75352 247 aa20.71■□□□□ 0.91
VEGFC-202ENST00000618562 S100A9P06702 114 aaKnown RBP20.71■□□□□ 0.91
VEGFC-202ENST00000618562 CCL3L1P16619 93 aa20.71■□□□□ 0.91
VEGFC-202ENST00000618562 CD1BP29016 333 aa20.71■□□□□ 0.91
VEGFC-202ENST00000618562 RPS16P62249 146 aaKnown RBP20.71■□□□□ 0.91
VEGFC-202ENST00000618562 S100A12P80511 92 aa20.71■□□□□ 0.91
VEGFC-202ENST00000618562 TMEM30BQ3MIR4 351 aa20.71■□□□□ 0.91
VEGFC-202ENST00000618562 CYP2G1PQ6ZSU1 146 aa20.71■□□□□ 0.91
VEGFC-202ENST00000618562 SSX9Q7RTT3 188 aa20.71■□□□□ 0.91
VEGFC-202ENST00000618562 RAB24Q969Q5 203 aa20.71■□□□□ 0.91
VEGFC-202ENST00000618562 RAB1BQ9H0U4 201 aa20.71■□□□□ 0.91
VEGFC-202ENST00000618562 GAL3ST2Q9H3Q3 398 aa20.71■□□□□ 0.91
VEGFC-202ENST00000618562 RELBQ01201 579 aa20.71■□□□□ 0.91
VEGFC-202ENST00000618562 KIAA0141Q14154 515 aaPredicted RBP20.71■□□□□ 0.91
VEGFC-202ENST00000618562 OR13D1Q8NGV5 346 aa20.71■□□□□ 0.91
VEGFC-202ENST00000618562 SMIM7Q9BQ49 75 aa20.71■□□□□ 0.91
VEGFC-202ENST00000618562 TGIF2-C20orf24A0A0A6YYL0 155 aa20.7■□□□□ 0.9
VEGFC-202ENST00000618562 LY6HO94772 140 aa20.7■□□□□ 0.9
VEGFC-202ENST00000618562 KBTBD11O94819 623 aa20.7■□□□□ 0.9
VEGFC-202ENST00000618562 VDAC2P45880 294 aaPredicted RBP20.7■□□□□ 0.9
VEGFC-202ENST00000618562 ZNF674Q2M3X9 581 aa20.7■□□□□ 0.9
VEGFC-202ENST00000618562 DTX2Q86UW9 622 aa20.7■□□□□ 0.9
VEGFC-202ENST00000618562 ZNF714Q96N38 554 aa20.7■□□□□ 0.9
VEGFC-202ENST00000618562 FSTL3O95633 263 aa20.69■□□□□ 0.9
VEGFC-202ENST00000618562 IGHV2-70P01814 119 aa20.69■□□□□ 0.9
VEGFC-202ENST00000618562 IGFBP2P18065 325 aa20.69■□□□□ 0.9
VEGFC-202ENST00000618562 Q8N7P7 452 aa20.69■□□□□ 0.9
VEGFC-202ENST00000618562 TMPRSS5Q9H3S3 457 aa20.69■□□□□ 0.9
VEGFC-202ENST00000618562 TMEM140Q9NV12 185 aa20.69■□□□□ 0.9
VEGFC-202ENST00000618562 SEC14L6B5MCN3 397 aa20.69■□□□□ 0.9
VEGFC-202ENST00000618562 IFNA10P01566 189 aa20.69■□□□□ 0.9
VEGFC-202ENST00000618562 GNG10P50151 68 aa20.69■□□□□ 0.9
VEGFC-202ENST00000618562 HEYLQ9NQ87 328 aaPredicted RBP20.69■□□□□ 0.9
VEGFC-202ENST00000618562 SAA2-SAA4A0A096LPE2 208 aa20.68■□□□□ 0.9
VEGFC-202ENST00000618562 HMGB3O15347 200 aaKnown RBP20.68■□□□□ 0.9
VEGFC-202ENST00000618562 SAA2P0DJI9 122 aaPredicted RBP20.68■□□□□ 0.9
VEGFC-202ENST00000618562 CDC34P49427 236 aaPredicted RBP20.68■□□□□ 0.9
VEGFC-202ENST00000618562 OR10A7Q8NGE5 316 aa20.68■□□□□ 0.9
VEGFC-202ENST00000618562 TGOLN2O43493 480 aa20.68■□□□□ 0.9
VEGFC-202ENST00000618562 OPN1MWP04001 364 aa20.68■□□□□ 0.9
VEGFC-202ENST00000618562 OPN1MW2P0DN77 364 aa20.68■□□□□ 0.9
VEGFC-202ENST00000618562 OPN1MW3P0DN78 364 aa20.68■□□□□ 0.9
VEGFC-202ENST00000618562 THBS3P49746 956 aa20.68■□□□□ 0.9
VEGFC-202ENST00000618562 TMEM241Q24JQ0 296 aa20.68■□□□□ 0.9
VEGFC-202ENST00000618562 TMEM249Q2WGJ8 235 aa20.68■□□□□ 0.9
VEGFC-202ENST00000618562 ADTRPQ96IZ2 230 aa20.68■□□□□ 0.9
VEGFC-202ENST00000618562 VKORC1L1Q8N0U8 176 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms