RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 OR4S2Q8NH73 311 aa10.18□□□□□ -0.78
CIITA-212ENST00000618207 GATAD1Q8WUU5 269 aa10.18□□□□□ -0.78
CIITA-212ENST00000618207 CIB3Q96Q77 187 aaPredicted RBP10.18□□□□□ -0.78
CIITA-212ENST00000618207 hCG_1809904A0A1W2PP81 198 aa10.18□□□□□ -0.78
CIITA-212ENST00000618207 A0A1W2PR64 198 aa10.18□□□□□ -0.78
CIITA-212ENST00000618207 A0A1W2PRV1 198 aa10.18□□□□□ -0.78
CIITA-212ENST00000618207 PPIHO43447 177 aaKnown RBP10.18□□□□□ -0.78
CIITA-212ENST00000618207 SOX15O60248 233 aa10.18□□□□□ -0.78
CIITA-212ENST00000618207 LY6HO94772 140 aa10.18□□□□□ -0.78
CIITA-212ENST00000618207 DIAPH2-AS1Q14236 149 aa10.18□□□□□ -0.78
CIITA-212ENST00000618207 TMEM41BQ5BJD5 291 aa10.18□□□□□ -0.78
CIITA-212ENST00000618207 ZNF429Q86V71 674 aa10.18□□□□□ -0.78
CIITA-212ENST00000618207 TCTEX1D1Q8N7M0 179 aa10.18□□□□□ -0.78
CIITA-212ENST00000618207 ZNF709Q8N972 641 aa10.18□□□□□ -0.78
CIITA-212ENST00000618207 ZCCHC14Q8WYQ9 949 aaKnown RBP10.18□□□□□ -0.78
CIITA-212ENST00000618207 PINX1Q96BK5 328 aaKnown RBP10.18□□□□□ -0.78
CIITA-212ENST00000618207 VKORC1Q9BQB6 163 aa10.18□□□□□ -0.78
CIITA-212ENST00000618207 TCF19Q9Y242 345 aa10.18□□□□□ -0.78
CIITA-212ENST00000618207 COLCA2A8K830 154 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 OR8U8P0C7N1 319 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 TEX36Q5VZQ5 186 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 TMEM200BQ69YZ2 307 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 OR10G4Q8NGN3 311 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 OR10G9Q8NGN4 311 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 OR10G7Q8NGN6 311 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 NPCDR1Q9BY65 106 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 HIPK2Q9H2X6 1198 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 NGBQ9NPG2 151 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 CISD1Q9NZ45 108 aaKnown RBP10.17□□□□□ -0.78
CIITA-212ENST00000618207 CTSZQ9UBR2 303 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 RPUSD1Q9UJJ7 312 aaKnown RBP10.17□□□□□ -0.78
CIITA-212ENST00000618207 BTBD17A6NE02 478 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 VSTM5A8MXK1 200 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 SERF2P84101 59 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 ZNF674Q2M3X9 581 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 C1orf87Q8N0U7 546 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 DDB2Q92466 427 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 FAM122AQ96E09 287 aa10.17□□□□□ -0.78
CIITA-212ENST00000618207 PSMG3Q9BT73 122 aaPredicted RBP10.17□□□□□ -0.78
CIITA-212ENST00000618207 PATZ1Q9HBE1 687 aaKnown RBP10.17□□□□□ -0.78
CIITA-212ENST00000618207 SRRM4A7MD48 611 aaKnown RBP10.16□□□□□ -0.78
CIITA-212ENST00000618207 DVL1O14640 695 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 CD3EP07766 207 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 TAGLN2P37802 199 aaKnown RBP10.16□□□□□ -0.78
CIITA-212ENST00000618207 RAB5BP61020 215 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 NUTF2P61970 127 aaKnown RBP10.16□□□□□ -0.78
CIITA-212ENST00000618207 NCMAPQ5T1S8 102 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 RAB39BQ96DA2 213 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 MISP3Q96FF7 219 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 SLC35D1Q9NTN3 355 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 HRNRQ86YZ3 2850 aaPredicted RBP10.16□□□□□ -0.78
CIITA-212ENST00000618207 HSBP1L1C9JCN9 74 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 NDUFB3O43676 98 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 CT45A6P0DMU7 189 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 CT45A5P0DMU8 189 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 CT45A7P0DMV0 189 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 CD1BP29016 333 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 LY6DQ14210 128 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 ZNF506Q5JVG8 444 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 SSMEM1Q8WWF3 244 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 ZNF714Q96N38 554 aa10.16□□□□□ -0.78
CIITA-212ENST00000618207 LOC102723971A0A1B0GUV8 181 aa10.15□□□□□ -0.78
CIITA-212ENST00000618207 BCL2P10415 239 aa10.15□□□□□ -0.78
CIITA-212ENST00000618207 DLK1P80370 383 aa10.15□□□□□ -0.78
CIITA-212ENST00000618207 ZNF439Q8NDP4 499 aa10.15□□□□□ -0.78
CIITA-212ENST00000618207 OR13D1Q8NGV5 346 aa10.15□□□□□ -0.78
CIITA-212ENST00000618207 MRPL20Q9BYC9 149 aaKnown RBP10.15□□□□□ -0.78
CIITA-212ENST00000618207 LINC00312Q9Y6C7 94 aa10.15□□□□□ -0.78
CIITA-212ENST00000618207 IGHV3-72A0A0B4J1Y9 119 aa10.15□□□□□ -0.78
CIITA-212ENST00000618207 THBS3P49746 956 aa10.15□□□□□ -0.78
CIITA-212ENST00000618207 ZNF343Q6P1L6 599 aa10.15□□□□□ -0.78
CIITA-212ENST00000618207 HIST1H2BAQ96A08 127 aa10.15□□□□□ -0.78
CIITA-212ENST00000618207 NIPSNAP3BQ9BS92 247 aa10.15□□□□□ -0.78
CIITA-212ENST00000618207 LRRC10Q5BKY1 277 aa10.15□□□□□ -0.79
CIITA-212ENST00000618207 SLC25A48Q6ZT89 311 aaKnown RBP10.15□□□□□ -0.79
CIITA-212ENST00000618207 OR10X1Q8NGY0 326 aa10.15□□□□□ -0.79
CIITA-212ENST00000618207 TMEM170AQ8WVE7 144 aa10.15□□□□□ -0.79
CIITA-212ENST00000618207 RAB9BQ9NP90 201 aa10.15□□□□□ -0.79
CIITA-212ENST00000618207 IGHV1-69-2A0A0G2JMI3 117 aa10.14□□□□□ -0.79
CIITA-212ENST00000618207 SIAH2O43255 324 aa10.14□□□□□ -0.79
CIITA-212ENST00000618207 HSPB1P04792 205 aaKnown RBP10.14□□□□□ -0.79
CIITA-212ENST00000618207 UBE2G2P60604 165 aa10.14□□□□□ -0.79
CIITA-212ENST00000618207 KIAA0141Q14154 515 aaPredicted RBP10.14□□□□□ -0.79
CIITA-212ENST00000618207 KHDC3LQ587J8 217 aa10.14□□□□□ -0.79
CIITA-212ENST00000618207 SP5Q6BEB4 398 aaPredicted RBP10.14□□□□□ -0.79
CIITA-212ENST00000618207 DPPA3Q6W0C5 159 aa10.14□□□□□ -0.79
CIITA-212ENST00000618207 MOB3BQ86TA1 216 aa10.14□□□□□ -0.79
CIITA-212ENST00000618207 RAB24Q969Q5 203 aa10.14□□□□□ -0.79
CIITA-212ENST00000618207 RPUSD4Q96CM3 377 aaKnown RBP10.14□□□□□ -0.79
CIITA-212ENST00000618207 DIRC2Q96SL1 478 aa10.14□□□□□ -0.79
CIITA-212ENST00000618207 GAL3ST2Q9H3Q3 398 aa10.14□□□□□ -0.79
CIITA-212ENST00000618207 MS4A5Q9H3V2 200 aa10.14□□□□□ -0.79
CIITA-212ENST00000618207 ENY2Q9NPA8 101 aa10.14□□□□□ -0.79
CIITA-212ENST00000618207 METTL1Q9UBP6 276 aaKnown RBP10.14□□□□□ -0.79
CIITA-212ENST00000618207 RBFOX2O43251 390 aaKnown RBP eCLIP10.14□□□□□ -0.79
CIITA-212ENST00000618207 OR2C1O95371 312 aa10.14□□□□□ -0.79
CIITA-212ENST00000618207 APOBEC3AP31941 199 aaPredicted RBP10.14□□□□□ -0.79
CIITA-212ENST00000618207 ATP6V1FQ16864 119 aa10.14□□□□□ -0.79
CIITA-212ENST00000618207 MIC13Q5XKP0 118 aa10.14□□□□□ -0.79
CIITA-212ENST00000618207 GGACTQ9BVM4 153 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms