RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 RCC1LQ96I51 464 aaKnown RBP14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 ENY2Q9NPA8 101 aa14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 KIAA1456Q9P272 454 aa14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 FAM74A7A6NL05 159 aa14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 C22orf46C9J442 243 aa14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 BTF3P20290 206 aaKnown RBP14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 MDKP21741 143 aaPredicted RBP14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 RAB2AP61019 212 aa14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 HAGHQ16775 308 aa14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 FAM74A3Q4VXF1 159 aa14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 NPCDR1Q9BY65 106 aa14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 CHODLQ9H9P2 273 aa14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 ACACBO00763 2458 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 A0A1B0GW64 132 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 A0A1W2PPH5 198 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 RBFOX3A6NFN3 312 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 PRSS46E5RG02 174 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 NDUFS7O75251 213 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 EIF3GO75821 320 aaKnown RBP eCLIP14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 IGKV1D-33P01593 117 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 IGKV1-33P01594 117 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 HBE1P02100 147 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 IFNA4P05014 189 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 ATF4P18848 351 aaPredicted RBP14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 CD1BP29016 333 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 NPBWR1P48145 328 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 LCN15Q6UWW0 184 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 PDPNQ86YL7 162 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 ONECUT1Q9UBC0 465 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 WASHC3Q9Y3C0 194 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 CFAP46Q8IYW2 2715 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 TNCP24821 2201 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 TEX50A0A1B0GTY4 177 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 SMCO3A2RU48 225 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 DNASE2O00115 360 aaPredicted RBP14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 SCAF4O95104 1147 aaKnown RBP14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 COX7A1P24310 79 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 IL3RAP26951 378 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 SLC24A4Q8NFF2 622 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 OR4C13Q8NGP0 309 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 ZNF257Q9Y2Q1 563 aa14.06□□□□□ -0.16
PCDHGC3-205ENST00000617641 IGSF10Q6WRI0 2623 aa14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 IGHV3-72A0A0B4J1Y9 119 aa14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 TRAV1-1A0A0B4J248 108 aa14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 CA2P00918 260 aa14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 IGLV1-47P01700 117 aa14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 NPY1RP25929 384 aa14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 FGF8P55075 233 aaPredicted RBP14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 RAB11AP62491 216 aa14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 PRCDQ00LT1 54 aa14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 HLA-DRB5Q30154 266 aa14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 LY6G5BQ8NDX9 201 aa14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 PCGF1Q9BSM1 259 aa14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 CLEC7AQ9BXN2 247 aa14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 PLEKHA3Q9HB20 300 aa14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 WDR83OSQ9Y284 106 aa14.05□□□□□ -0.16
PCDHGC3-205ENST00000617641 SNAPINO95295 136 aa14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 FFAR4Q5NUL3 377 aa14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 ZNF787Q6DD87 383 aa14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 RPP25LQ8N5L8 163 aaKnown RBP14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 ZNF709Q8N972 641 aa14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 MBD3L1Q8WWY6 194 aa14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 TNFRSF14Q92956 283 aa14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 KPTNQ9Y664 436 aa14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 RBP4P02753 201 aa14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 LIPFP07098 398 aa14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 OR13C7P0DN81 318 aa14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 IGFBP2P18065 325 aa14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 PRRX1P54821 245 aa14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 CLDND2Q8NHS1 167 aa14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 SLC35B3Q9H1N7 401 aa14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 PATZ1Q9HBE1 687 aaKnown RBP14.04□□□□□ -0.16
PCDHGC3-205ENST00000617641 TACC2O95359 2948 aa14.03□□□□□ -0.16
PCDHGC3-205ENST00000617641 RAB13P51153 203 aa14.03□□□□□ -0.16
PCDHGC3-205ENST00000617641 Q8N7P7 452 aa14.03□□□□□ -0.16
PCDHGC3-205ENST00000617641 RITA1Q96K30 269 aa14.03□□□□□ -0.16
PCDHGC3-205ENST00000617641 FKBP11Q9NYL4 201 aa14.03□□□□□ -0.16
PCDHGC3-205ENST00000617641 TSPAN4O14817 238 aa14.03□□□□□ -0.16
PCDHGC3-205ENST00000617641 ENSAO43768 121 aaKnown RBP14.03□□□□□ -0.16
PCDHGC3-205ENST00000617641 IGLV2-23P01705 113 aa14.03□□□□□ -0.16
PCDHGC3-205ENST00000617641 DLK1P80370 383 aa14.03□□□□□ -0.16
PCDHGC3-205ENST00000617641 ICAM4Q14773 271 aa14.03□□□□□ -0.16
PCDHGC3-205ENST00000617641 GGACTQ9BVM4 153 aa14.03□□□□□ -0.16
PCDHGC3-205ENST00000617641 GNG13Q9P2W3 67 aa14.03□□□□□ -0.16
PCDHGC3-205ENST00000617641 ARHGAP32A7KAX9 2087 aa14.02□□□□□ -0.16
PCDHGC3-205ENST00000617641 MAP1LC3B2A6NCE7 125 aa14.02□□□□□ -0.16
PCDHGC3-205ENST00000617641 A6NNC1 897 aa14.02□□□□□ -0.16
PCDHGC3-205ENST00000617641 BUB1B-PAK6H3BSN5 160 aa14.02□□□□□ -0.16
PCDHGC3-205ENST00000617641 RPL8P62917 257 aaKnown RBP14.02□□□□□ -0.16
PCDHGC3-205ENST00000617641 TMEM88Q6PEY1 159 aa14.02□□□□□ -0.16
PCDHGC3-205ENST00000617641 TREML4Q6UXN2 200 aa14.02□□□□□ -0.16
PCDHGC3-205ENST00000617641 LINC00518Q8N0U6 118 aa14.02□□□□□ -0.16
PCDHGC3-205ENST00000617641 PNKDQ8N490 385 aa14.02□□□□□ -0.16
PCDHGC3-205ENST00000617641 OR10W1Q8NGF6 305 aa14.02□□□□□ -0.16
PCDHGC3-205ENST00000617641 OR5B3Q8NH48 314 aa14.02□□□□□ -0.16
PCDHGC3-205ENST00000617641 SSBP3Q9BWW4 388 aaPredicted RBP14.02□□□□□ -0.16
PCDHGC3-205ENST00000617641 MAP1LC3BQ9GZQ8 125 aa14.02□□□□□ -0.16
PCDHGC3-205ENST00000617641 SLC25A22Q9H936 323 aa14.02□□□□□ -0.16
PCDHGC3-205ENST00000617641 hCG_1809904A0A1W2PP81 198 aa14.02□□□□□ -0.17
PCDHGC3-205ENST00000617641 A0A1W2PPE2 198 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms