RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 OPRK1P41145 380 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 ERVFRD-1P60508 538 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 SRSF6Q13247 344 aaKnown RBP4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 Q8WTZ3 238 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 GATAD1Q8WUU5 269 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 NPCDR1Q9BY65 106 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 SRD5A3Q9H8P0 318 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 ZNF253O75346 499 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 IGKV3-15P01624 115 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 COX7A1P24310 79 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 PAX9P55771 341 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 RPL8P62917 257 aaKnown RBP4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 KRTCAP3Q53RY4 240 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 TMEM167BQ9NRX6 74 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 CISD1Q9NZ45 108 aaKnown RBP4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 CLCF1Q9UBD9 225 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 SLC25A17O43808 307 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 HIST1H2BKO60814 126 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 HIST1H2BJP06899 126 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 CRISP2P16562 243 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 HIST1H2BOP23527 126 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 HIST1H2BBP33778 126 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 CNN1P51911 297 aaKnown RBP4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 HIST1H2BDP58876 126 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 HIST1H2BCP62807 126 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 HIST2H2BEQ16778 126 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 DBX2Q6ZNG2 339 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 HIST1H2BHQ93079 126 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 HIST1H2BNQ99877 126 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 HIST1H2BMQ99879 126 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 FGF23Q9GZV9 251 aaPredicted RBP4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 ZNF586Q9NXT0 402 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 METRNQ9UJH8 293 aa4.71□□□□□ -1.66
SYNCRIP-204ENST00000616122 TRBV24-1A0A075B6N3 115 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 ELOA3CA0A087WX78 387 aaPredicted RBP4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 NPIPB11E5RHQ5 1161 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 LRP11Q86VZ4 500 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 RPEQ96AT9 228 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 TIMD4Q96H15 378 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 COL25A1Q9BXS0 654 aaPredicted RBP4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 OR51M1Q9H341 326 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 FKBP11Q9NYL4 201 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 IGHV3-72A0A0B4J1Y9 119 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 A0A1W2PN81 502 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 IGHV3-48P01763 117 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 CEACAM1P13688 526 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 GCSAMLQ5JQS6 135 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 CRIP3Q6Q6R5 217 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 DTX2Q86UW9 622 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 CHD6Q8TD26 2715 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 STARD4Q96DR4 205 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 PIMREGQ9BSJ6 248 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 TRAPPC1Q9Y5R8 145 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 HELTA6NFD8 242 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 RRHO14718 337 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 GNG4P50150 75 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 PMS2P11Q13670 270 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 MOB3BQ86TA1 216 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 OR5B3Q8NH48 314 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 PLSCR4Q9NRQ2 329 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 ZDHHC8Q9ULC8 765 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 ALPK3Q96L96 1907 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 KBTBD11-OT1A0A1B0GTJ5 212 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 LINC00473A8K010 186 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 PDE6DO43924 150 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 COX7A2P2O60397 106 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 SCGB2A1O75556 95 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 LINC00869P0C866 280 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 ORM2P19652 201 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 RPL29P47914 159 aaKnown RBP4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 BPIFB3P59826 476 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 SELENOTP62341 195 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 BATFQ16520 125 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 ZNF439Q8NDP4 499 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 FAM216AQ8WUB2 273 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 UBE2E2Q96LR5 201 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 TXN2Q99757 166 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 SLC25A10Q9UBX3 287 aaPredicted RBP4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 ZNF835Q9Y2P0 537 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 CFAP46Q8IYW2 2715 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 C5orf52A6NGY3 159 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 ZNF729A6NN14 1252 aaPredicted RBP4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 KIAA1324LA8MWY0 1029 aaPredicted RBP4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 CD3EP07766 207 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 OR4A8P0C604 315 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 OR10J4P0C629 311 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 HOXA4Q00056 320 aaPredicted RBP4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 PAX5Q02548 391 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 HEPN1Q6WQI6 88 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 SPNS3Q6ZMD2 512 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 WDR31Q8NA23 367 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 NABP2Q9BQ15 211 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 RPUSD1Q9UJJ7 312 aaKnown RBP4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 TICRRQ7Z2Z1 1910 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 LINC00587B1AMM8 73 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 CXorf1O96002 111 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 TDGF1P13385 188 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 LMO1P25800 156 aa4.7□□□□□ -1.66
SYNCRIP-204ENST00000616122 CD40P25942 277 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms