RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PDCD10Q9BUL8 212 aa11.64□□□□□ -0.55
CD48-203ENST00000613788 TMEM14BQ9NUH8 114 aa11.64□□□□□ -0.55
CD48-203ENST00000613788 ZNF257Q9Y2Q1 563 aa11.64□□□□□ -0.55
CD48-203ENST00000613788 OR51B2Q9Y5P1 312 aa11.64□□□□□ -0.55
CD48-203ENST00000613788 CUBNO60494 3623 aa11.63□□□□□ -0.55
CD48-203ENST00000613788 C13orf42A0A1B0GVH6 325 aa11.63□□□□□ -0.55
CD48-203ENST00000613788 C5orf51A6NDU8 294 aa11.63□□□□□ -0.55
CD48-203ENST00000613788 FAM25EA8MYX2 175 aa11.63□□□□□ -0.55
CD48-203ENST00000613788 RPL27AP46776 148 aaKnown RBP11.63□□□□□ -0.55
CD48-203ENST00000613788 COMPP49747 757 aaPredicted RBP11.63□□□□□ -0.55
CD48-203ENST00000613788 OR2B8PP59922 312 aa11.63□□□□□ -0.55
CD48-203ENST00000613788 GSG1LQ6UXU4 331 aa11.63□□□□□ -0.55
CD48-203ENST00000613788 Q8N2B8 174 aa11.63□□□□□ -0.55
CD48-203ENST00000613788 OR1L8Q8NGR8 309 aa11.63□□□□□ -0.55
CD48-203ENST00000613788 OR1S1Q8NH92 325 aa11.63□□□□□ -0.55
CD48-203ENST00000613788 OR2T6Q8NHC8 308 aa11.63□□□□□ -0.55
CD48-203ENST00000613788 MED28Q9H204 178 aa11.63□□□□□ -0.55
CD48-203ENST00000613788 ZNF702PQ9H963 129 aa11.63□□□□□ -0.55
CD48-203ENST00000613788 TEX50A0A1B0GTY4 177 aa11.62□□□□□ -0.55
CD48-203ENST00000613788 CCSO14618 274 aa11.62□□□□□ -0.55
CD48-203ENST00000613788 IFNA17P01571 189 aa11.62□□□□□ -0.55
CD48-203ENST00000613788 HSPE1P61604 102 aaKnown RBP11.62□□□□□ -0.55
CD48-203ENST00000613788 IAH1Q2TAA2 248 aaPredicted RBP11.62□□□□□ -0.55
CD48-203ENST00000613788 Q6ZS46 218 aa11.62□□□□□ -0.55
CD48-203ENST00000613788 Q6ZSV7 163 aa11.62□□□□□ -0.55
CD48-203ENST00000613788 ABHD5Q8WTS1 349 aa11.62□□□□□ -0.55
CD48-203ENST00000613788 SRSF12Q8WXF0 261 aaKnown RBP11.62□□□□□ -0.55
CD48-203ENST00000613788 ARPC1AQ92747 370 aa11.62□□□□□ -0.55
CD48-203ENST00000613788 QTRT1Q9BXR0 403 aaKnown RBP11.62□□□□□ -0.55
CD48-203ENST00000613788 PARP11Q9NR21 331 aa11.62□□□□□ -0.55
CD48-203ENST00000613788 MPTX1A8MV57 137 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 AP4M1O00189 453 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 GOSR2O14653 212 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 ST8SIA3O43173 380 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 NDUFA7O95182 113 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 OPN1MWP04001 364 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 TRAPPC2P0DI81 140 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 TRAPPC2BP0DI82 140 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 OPN1MW2P0DN77 364 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 OPN1MW3P0DN78 364 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 TMEM267Q0VDI3 215 aaPredicted RBP11.61□□□□□ -0.55
CD48-203ENST00000613788 AARDQ4LEZ3 155 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 OR5M8Q8NGP6 311 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 OR52E5Q8NH55 327 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 GRPEL2Q8TAA5 225 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 OR10C1Q96KK4 312 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 C16orf95Q9H693 158 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 MGAT4CQ9UBM8 478 aa11.61□□□□□ -0.55
CD48-203ENST00000613788 MSGN1A6NI15 193 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 LINC01548A6NM66 108 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 PITX3O75364 302 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 IGF1P05019 195 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 MYOD1P15172 320 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 VDAC2P45880 294 aaPredicted RBP11.6□□□□□ -0.55
CD48-203ENST00000613788 SPCS3P61009 180 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 RRAS2P62070 204 aaPredicted RBP11.6□□□□□ -0.55
CD48-203ENST00000613788 SSBP2P81877 361 aaPredicted RBP11.6□□□□□ -0.55
CD48-203ENST00000613788 SRSF2Q01130 221 aaKnown RBP11.6□□□□□ -0.55
CD48-203ENST00000613788 C2orf68Q2NKX9 166 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 OR4F5Q8NH21 305 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 SGMS2Q8NHU3 365 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 C2orf50Q96LR7 162 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 TMEM68Q96MH6 324 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 FYTTD1Q96QD9 318 aaKnown RBP11.6□□□□□ -0.55
CD48-203ENST00000613788 HINT2Q9BX68 163 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 NDUFA4L2Q9NRX3 87 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 GSKIPQ9P0R6 139 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 FAM90A26D6RGX4 464 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 ATP6V0E1O15342 81 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 CYCSP99999 105 aaKnown RBP11.6□□□□□ -0.55
CD48-203ENST00000613788 NDPQ00604 133 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 C10orf55Q5SWW7 151 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 HSD17B13Q7Z5P4 300 aaPredicted RBP11.6□□□□□ -0.55
CD48-203ENST00000613788 PRIMA1Q86XR5 153 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 MRPL41Q8IXM3 137 aaKnown RBP11.6□□□□□ -0.55
CD48-203ENST00000613788 ZBTB8BQ8NAP8 495 aaPredicted RBP11.6□□□□□ -0.55
CD48-203ENST00000613788 SRSF8Q9BRL6 282 aaKnown RBP11.6□□□□□ -0.55
CD48-203ENST00000613788 FAM103A1Q9BTL3 118 aaKnown RBP11.6□□□□□ -0.55
CD48-203ENST00000613788 GON7Q9BXV9 100 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 ZNF580Q9UK33 172 aa11.6□□□□□ -0.55
CD48-203ENST00000613788 A0A1W2PN81 502 aa11.59□□□□□ -0.55
CD48-203ENST00000613788 E7EUB6 86 aa11.59□□□□□ -0.55
CD48-203ENST00000613788 HKR1P10072 659 aa11.59□□□□□ -0.55
CD48-203ENST00000613788 EGR2P11161 476 aaPredicted RBP11.59□□□□□ -0.55
CD48-203ENST00000613788 CHRNA7P36544 502 aa11.59□□□□□ -0.55
CD48-203ENST00000613788 CRIP2P52943 208 aaPredicted RBP11.59□□□□□ -0.55
CD48-203ENST00000613788 PRCDQ00LT1 54 aa11.59□□□□□ -0.55
CD48-203ENST00000613788 TNFRSF9Q07011 255 aa11.59□□□□□ -0.55
CD48-203ENST00000613788 FCN2Q15485 313 aa11.59□□□□□ -0.55
CD48-203ENST00000613788 PDLIM3Q53GG5 364 aaPredicted RBP11.59□□□□□ -0.55
CD48-203ENST00000613788 AKIRIN2Q53H80 203 aa11.59□□□□□ -0.55
CD48-203ENST00000613788 PLEKHA3Q9HB20 300 aa11.59□□□□□ -0.55
CD48-203ENST00000613788 ENY2Q9NPA8 101 aa11.59□□□□□ -0.55
CD48-203ENST00000613788 HSPB7Q9UBY9 170 aa11.59□□□□□ -0.55
CD48-203ENST00000613788 TRAV41A0A0B4J266 112 aa11.58□□□□□ -0.56
CD48-203ENST00000613788 MED6O75586 246 aa11.58□□□□□ -0.56
CD48-203ENST00000613788 SIX6O95475 246 aa11.58□□□□□ -0.56
CD48-203ENST00000613788 NKX2-1P43699 371 aaPredicted RBP11.58□□□□□ -0.56
CD48-203ENST00000613788 ID3Q02535 119 aa11.58□□□□□ -0.56
CD48-203ENST00000613788 CXorf66Q5JRM2 361 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms