RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 C9orf152Q5JTZ5 239 aa11.55□□□□□ -0.56
PCDHGA3-202ENST00000612467 TCTEX1D1Q8N7M0 179 aa11.55□□□□□ -0.56
PCDHGA3-202ENST00000612467 ABHD5Q8WTS1 349 aa11.55□□□□□ -0.56
PCDHGA3-202ENST00000612467 FAM222BQ8WU58 562 aa11.55□□□□□ -0.56
PCDHGA3-202ENST00000612467 FAM210BQ96KR6 192 aa11.55□□□□□ -0.56
PCDHGA3-202ENST00000612467 PRSS46E5RG02 174 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 HNF1AP20823 631 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 TDGF1P3P51864 188 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 SELENOVP59797 346 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 ARSJQ5FYB0 599 aaPredicted RBP11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 CST9LP1Q5W188 147 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 ZNF788Q6ZQV5 615 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 CCL17Q92583 94 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 IDI2-AS1Q9NZ38 188 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 LY86O95711 162 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 IGHV2-70P01814 119 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 GATA4P43694 442 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 LYPD2Q6UXB3 125 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 GFRALQ6UXV0 394 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 ASCL5Q7RTU5 278 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 C1orf174Q8IYL3 243 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 ZNF439Q8NDP4 499 aa11.54□□□□□ -0.56
PCDHGA3-202ENST00000612467 MKRN2OSH3BPM6 223 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 CLDN34H7C241 214 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 RNF224P0DH78 156 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 FOSL1P15407 271 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 OR4S2Q8NH73 311 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 P2RX4Q99571 388 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 C15orf61A6NNL5 157 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 C11orf94C9JXX5 98 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 C16orf97H3BN30 126 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 PRRG2O14669 202 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 KBTBD11O94819 623 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 CA2P00918 260 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 TRGC1P0CF51 173 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 CT45A6P0DMU7 189 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 CT45A5P0DMU8 189 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 CT45A7P0DMV0 189 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 GATA2P23769 480 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 TMEM241Q24JQ0 296 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 GGTLC1Q9BX51 225 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 SEBOXQ9HB31 216 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 PXMP4Q9Y6I8 212 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 ASH1LQ9NR48 2969 aaKnown RBP11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 SPTBN4Q9H254 2564 aa11.53□□□□□ -0.56
PCDHGA3-202ENST00000612467 FOXH1O75593 365 aa11.52□□□□□ -0.56
PCDHGA3-202ENST00000612467 S100A9P06702 114 aaKnown RBP11.52□□□□□ -0.56
PCDHGA3-202ENST00000612467 SMIM6P0DI80 62 aa11.52□□□□□ -0.56
PCDHGA3-202ENST00000612467 ARL14EPLP0DKL9 152 aa11.52□□□□□ -0.56
PCDHGA3-202ENST00000612467 PRSS8Q16651 343 aa11.52□□□□□ -0.56
PCDHGA3-202ENST00000612467 TMEM108Q6UXF1 575 aa11.52□□□□□ -0.56
PCDHGA3-202ENST00000612467 C1QL4Q86Z23 238 aa11.52□□□□□ -0.56
PCDHGA3-202ENST00000612467 ZNF114Q8NC26 417 aa11.52□□□□□ -0.56
PCDHGA3-202ENST00000612467 OR10W1Q8NGF6 305 aa11.52□□□□□ -0.56
PCDHGA3-202ENST00000612467 SEPSECSQ9HD40 501 aaKnown RBP11.52□□□□□ -0.56
PCDHGA3-202ENST00000612467 SIRT7Q9NRC8 400 aa11.52□□□□□ -0.56
PCDHGA3-202ENST00000612467 NAT8Q9UHE5 227 aa11.52□□□□□ -0.56
PCDHGA3-202ENST00000612467 ABCA1O95477 2261 aa11.52□□□□□ -0.57
PCDHGA3-202ENST00000612467 C17orf112F2Z3M2 114 aa11.52□□□□□ -0.57
PCDHGA3-202ENST00000612467 SOD3P08294 240 aa11.52□□□□□ -0.57
PCDHGA3-202ENST00000612467 IRF2P14316 349 aa11.52□□□□□ -0.57
PCDHGA3-202ENST00000612467 CHRNA7P36544 502 aa11.52□□□□□ -0.57
PCDHGA3-202ENST00000612467 GNB1P62873 340 aa11.52□□□□□ -0.57
PCDHGA3-202ENST00000612467 BSXQ3C1V8 233 aa11.52□□□□□ -0.57
PCDHGA3-202ENST00000612467 ACOT6Q3I5F7 207 aaPredicted RBP11.52□□□□□ -0.57
PCDHGA3-202ENST00000612467 H1FXQ92522 213 aaKnown RBP11.52□□□□□ -0.57
PCDHGA3-202ENST00000612467 OR51M1Q9H341 326 aa11.52□□□□□ -0.57
PCDHGA3-202ENST00000612467 ACTL6BO94805 426 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 PDLIM3Q53GG5 364 aaPredicted RBP11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 KRTCAP3Q53RY4 240 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 CYP2G1PQ6ZSU1 146 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 C1orf87Q8N0U7 546 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 GPR61Q9BZJ8 451 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 GAB2Q9UQC2 676 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 COL6A6A6NMZ7 2263 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 A0A1W2PPV4 95 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 NDUFB4O95168 129 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 IGHV3-48P01763 117 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 MBP02144 154 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 FAM87AP0C7U9 286 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 IGFBP2P18065 325 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 PNRC1Q12796 327 aaPredicted RBP11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 AARDQ4LEZ3 155 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 OR13D1Q8NGV5 346 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 MRPL20Q9BYC9 149 aaKnown RBP11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 SLC25A10Q9UBX3 287 aaPredicted RBP11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 C17orf100A8MU93 164 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 E7EUB6 86 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 RBFOX2O43251 390 aaKnown RBP eCLIP11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 TNFSF4P23510 183 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 RAB7AP51149 207 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 SLC24A4Q8NFF2 622 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 WFIKKN1Q96NZ8 548 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 OR51B2Q9Y5P1 312 aa11.51□□□□□ -0.57
PCDHGA3-202ENST00000612467 CXorf65A6NEN9 183 aa11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 HOXA5P20719 270 aa11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 NPY1RP25929 384 aa11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 RND2P52198 227 aa11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 RPL31P62899 125 aaKnown RBP11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 SLC35D1Q9NTN3 355 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms