RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 CFHR4Q92496 578 aa9.9□□□□□ -0.82
CBWD1-220ENST00000612045 CLCC1Q96S66 551 aa9.9□□□□□ -0.82
CBWD1-220ENST00000612045 ZNF257Q9Y2Q1 563 aa9.9□□□□□ -0.82
CBWD1-220ENST00000612045 STRAPQ9Y3F4 350 aaKnown RBP9.9□□□□□ -0.82
CBWD1-220ENST00000612045 TBL2Q9Y4P3 447 aaKnown RBP9.9□□□□□ -0.82
CBWD1-220ENST00000612045 TEX50A0A1B0GTY4 177 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 OOSP1A8MZH6 123 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 B4DSR2 109 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 SLC25A17O43808 307 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 FGF2P09038 288 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 CD1BP29016 333 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 HOXA1P49639 335 aaPredicted RBP9.89□□□□□ -0.83
CBWD1-220ENST00000612045 RAB14P61106 215 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 ARL16Q0P5N6 197 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 CLLU1Q5K131 121 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 FAM74A1Q5RGS3 127 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 CCDC144NLQ6NUI1 221 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 HAPLN4Q86UW8 402 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 SLC7A5P1Q8MH63 180 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 DYNAPQ8N1N2 210 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 PCNPQ8WW12 178 aaKnown RBP9.89□□□□□ -0.83
CBWD1-220ENST00000612045 C17orf50Q8WW18 174 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 MBD6Q96DN6 1003 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 RNF5Q99942 180 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 ARV1Q9H2C2 271 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 HIPK2Q9H2X6 1198 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 HEYLQ9NQ87 328 aaPredicted RBP9.89□□□□□ -0.83
CBWD1-220ENST00000612045 ITGB1BP2Q9UKP3 347 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 CELSR1Q9NYQ6 3014 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 CENPVL3A0A0U1RRI6 287 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 VENTXO95231 258 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 OPN1MWP04001 364 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 OPN1MW2P0DN77 364 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 OPN1MW3P0DN78 364 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 CNTFRP26992 372 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 HBG1P69891 147 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 HBG2P69892 147 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 PRCDQ00LT1 54 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 ZNF266Q14584 549 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 PSG5Q15238 335 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 TEX45Q8NA69 505 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 OR5B3Q8NH48 314 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 TMED6Q8WW62 240 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 C1orf159Q96HA4 380 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 TSNAXQ99598 290 aaKnown RBP9.89□□□□□ -0.83
CBWD1-220ENST00000612045 ATP5SQ99766 215 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 HINT2Q9BX68 163 aa9.89□□□□□ -0.83
CBWD1-220ENST00000612045 ZNF430Q9H8G1 570 aaPredicted RBP9.89□□□□□ -0.83
CBWD1-220ENST00000612045 ZNF469Q96JG9 3925 aaPredicted RBP9.88□□□□□ -0.83
CBWD1-220ENST00000612045 CRYGBP07316 175 aa9.88□□□□□ -0.83
CBWD1-220ENST00000612045 SAA4P35542 130 aa9.88□□□□□ -0.83
CBWD1-220ENST00000612045 RPP30P78346 268 aaKnown RBP9.88□□□□□ -0.83
CBWD1-220ENST00000612045 Q5PR19 223 aa9.88□□□□□ -0.83
CBWD1-220ENST00000612045 OR8G2PQ6IF36 304 aa9.88□□□□□ -0.83
CBWD1-220ENST00000612045 MALSU1Q96EH3 234 aa9.88□□□□□ -0.83
CBWD1-220ENST00000612045 AJUBAQ96IF1 538 aa9.88□□□□□ -0.83
CBWD1-220ENST00000612045 GINS3Q9BRX5 216 aa9.88□□□□□ -0.83
CBWD1-220ENST00000612045 COMMD5Q9GZQ3 224 aa9.88□□□□□ -0.83
CBWD1-220ENST00000612045 ENY2Q9NPA8 101 aa9.88□□□□□ -0.83
CBWD1-220ENST00000612045 TPSG1Q9NRR2 321 aa9.88□□□□□ -0.83
CBWD1-220ENST00000612045 C15orf62A8K5M9 175 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 PMS2P5A8MQ11 134 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 NPFFO15130 113 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 DFFBO76075 338 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 IFNA10P01566 189 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 IGKV1D-33P01593 117 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 IGKV1-33P01594 117 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 NMBP08949 121 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 SLC38A11Q08AI6 406 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 PJVKQ0ZLH3 352 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 MRGPRG-AS1Q2M3A8 158 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 EIF5AL1Q6IS14 154 aaKnown RBP9.87□□□□□ -0.83
CBWD1-220ENST00000612045 THNSL2Q86YJ6 484 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 OR1L8Q8NGR8 309 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 SLC25A32Q9H2D1 315 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 PLEKHA3Q9HB20 300 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 NDUFA4L2Q9NRX3 87 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 HIF1ANQ9NWT6 349 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 SIGLEC9Q9Y336 463 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 AUP1Q9Y679 476 aa9.87□□□□□ -0.83
CBWD1-220ENST00000612045 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.87□□□□□ -0.83
CBWD1-220ENST00000612045 TRAV20A0A0B4J274 112 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 ATP6V1G1O75348 118 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 FBXO24O75426 580 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 MOSP00540 346 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 CD24P25063 80 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 LOXL1Q08397 574 aaPredicted RBP9.86□□□□□ -0.83
CBWD1-220ENST00000612045 PRSS8Q16651 343 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 LILRB2Q8N423 598 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 LINC01356Q8N9X3 169 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 HSD17B11Q8NBQ5 300 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 METTL1Q9UBP6 276 aaKnown RBP9.86□□□□□ -0.83
CBWD1-220ENST00000612045 RNF223E7ERA6 249 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 E7EUB6 86 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 SNRNP70P08621 437 aaKnown RBP9.86□□□□□ -0.83
CBWD1-220ENST00000612045 SPP1P10451 314 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 HNF4GQ14541 408 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 PRSS57Q6UWY2 283 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 MMD2Q8IY49 270 aa9.86□□□□□ -0.83
CBWD1-220ENST00000612045 OR10P1Q8NGE3 313 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms