RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 CARHSP1Q9Y2V2 147 aaKnown RBP7.12□□□□□ -1.27
SMAD4-217ENST00000611848 STRAPQ9Y3F4 350 aaKnown RBP7.12□□□□□ -1.27
SMAD4-217ENST00000611848 RBM7Q9Y580 266 aaKnown RBP7.12□□□□□ -1.27
SMAD4-217ENST00000611848 BTBD17A6NE02 478 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 J3QR06 171 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 IGLV1-47P01700 117 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 CD5P06127 495 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 RNASE1P07998 156 aaKnown RBP7.12□□□□□ -1.27
SMAD4-217ENST00000611848 P0C879 139 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 ADCYAP1P18509 176 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 HTR1DP28221 377 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 IER3P46695 156 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 SRSF2Q01130 221 aaKnown RBP7.12□□□□□ -1.27
SMAD4-217ENST00000611848 LTC4SQ16873 150 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 HLA-DRB5Q30154 266 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 Q6ZRG5 221 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 LHFPL4Q7Z7J7 247 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 COMMD1Q8N668 190 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 TCTEX1D1Q8N7M0 179 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 OR52L2PQ8NGH6 319 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 OR4P4Q8NGL7 312 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 OR5R1Q8NH85 324 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 C17orf50Q8WW18 174 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 NARS2Q96I59 477 aaKnown RBP7.12□□□□□ -1.27
SMAD4-217ENST00000611848 SEC11CQ9BY50 192 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 UQCC1Q9NVA1 299 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 GFOD1Q9NXC2 390 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 COA4Q9NYJ1 87 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 DPM3Q9P2X0 92 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 CACFD1Q9UGQ2 172 aa7.12□□□□□ -1.27
SMAD4-217ENST00000611848 FAM90A26D6RGX4 464 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 WRBO00258 174 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 TXNL1O43396 289 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 CEACAM3P40198 252 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 DYNLT3P51808 116 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 AKR1C2P52895 323 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 LOXL3P58215 753 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 TAS2R30P59541 319 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 DEFA5Q01523 94 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 AKR1C1Q04828 323 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 SSX2Q16385 188 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 LRRC75BQ2VPJ9 315 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 KRTAP24-1Q3LI83 254 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 SVBPQ8N300 66 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 LINC00311Q8N616 119 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 C8orf31Q8N9H6 132 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 DUX5Q96PT3 197 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 SSX3Q99909 188 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 OR2D2Q9H210 308 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 SH3BGRL3Q9H299 93 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 CACNG5Q9UF02 275 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 PSG11Q9UQ72 335 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 AMMECR1Q9Y4X0 333 aaPredicted RBP7.11□□□□□ -1.27
SMAD4-217ENST00000611848 WSB1Q9Y6I7 421 aa7.11□□□□□ -1.27
SMAD4-217ENST00000611848 OOSP1A8MZH6 123 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 UMAD1C9J7I0 102 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 BUB1B-PAK6H3BSN5 160 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 DNASE2O00115 360 aaPredicted RBP7.1□□□□□ -1.27
SMAD4-217ENST00000611848 IGHV4-59P01825 116 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 ATP6V0CP27449 155 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 PPP1CCP36873 323 aaKnown RBP7.1□□□□□ -1.27
SMAD4-217ENST00000611848 SULT1A1P50225 295 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 BRWD1-AS2P59051 145 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 RPL15P61313 204 aaKnown RBP7.1□□□□□ -1.27
SMAD4-217ENST00000611848 RPL23AP62750 156 aaKnown RBP7.1□□□□□ -1.27
SMAD4-217ENST00000611848 RPL30P62888 115 aaKnown RBP7.1□□□□□ -1.27
SMAD4-217ENST00000611848 LDLRAD2Q5SZI1 272 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 FAM53AQ6NSI3 398 aaPredicted RBP7.1□□□□□ -1.27
SMAD4-217ENST00000611848 ZNF66Q6ZN08 573 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 HSD17B11Q8NBQ5 300 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 OR5C1Q8NGR4 320 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 RNASE11Q8TAA1 199 aaKnown RBP7.1□□□□□ -1.27
SMAD4-217ENST00000611848 AGMATQ9BSE5 352 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 C19orf24Q9BVV8 132 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 SCRT1Q9BWW7 348 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 NKX6-2Q9C056 277 aaPredicted RBP7.1□□□□□ -1.27
SMAD4-217ENST00000611848 HIPK2Q9H2X6 1198 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 TREM1Q9NP99 234 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 GNG12Q9UBI6 72 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 JPT1Q9UK76 154 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 RNF150Q9ULK6 438 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 MMP24Q9Y5R2 645 aa7.1□□□□□ -1.27
SMAD4-217ENST00000611848 IGHV3-43A0A0B4J1X8 118 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 F8W036 122 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 SYNGR2O43760 224 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 YPEL1O60688 119 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 CST7O76096 145 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 TSPAN15O95858 294 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 IGHV3-43DP0DP04 118 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 SNCAP37840 140 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 CAMLGP49069 296 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 ARHGDIBP52566 201 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 CATR1Q13166 79 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 CLINT1Q14677 625 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 GUCA2BQ16661 112 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 IZUMO4Q1ZYL8 232 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 CCDC144NLQ6NUI1 221 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 PUSL1Q8N0Z8 303 aaKnown RBP7.09□□□□□ -1.27
SMAD4-217ENST00000611848 DYNAPQ8N1N2 210 aa7.09□□□□□ -1.27
SMAD4-217ENST00000611848 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms