RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 FBXL7Q9UJT9 491 aa18.49■□□□□ 0.55
SHANK2-220ENST00000608988 PTPRBP23467 1997 aa18.49■□□□□ 0.55
SHANK2-220ENST00000608988 DIRC3C9JPN6 131 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 M0R1X1 148 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 MPV17P39210 176 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 CTRLP40313 264 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 PRR20EP86478 221 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 PRR20CP86479 221 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 PRR20DP86480 221 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 PRR20BP86481 221 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 PRR20AP86496 221 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 MORN2Q502X0 79 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 ZNF826PQ6ZT77 177 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 FAM90A1Q86YD7 464 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 Q8N976 141 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 OR4S2Q8NH73 311 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 Q8TCH9 128 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 TMEM140Q9NV12 185 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 UQCR10Q9UDW1 63 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 FOXA2Q9Y261 457 aaPredicted RBP18.48■□□□□ 0.55
SHANK2-220ENST00000608988 ZFP30Q9Y2G7 519 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 COL27A1Q8IZC6 1860 aaPredicted RBP18.48■□□□□ 0.55
SHANK2-220ENST00000608988 HELTA6NFD8 242 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 C15orf61A6NNL5 157 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 ZNF253O75346 499 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 HLA-DQA1P01909 254 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 NPY1RP25929 384 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 MDS2Q8NDY4 140 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 C19orf24Q9BVV8 132 aa18.48■□□□□ 0.55
SHANK2-220ENST00000608988 DOCK10Q96BY6 2186 aa18.47■□□□□ 0.55
SHANK2-220ENST00000608988 DEFB108AA8MXU0 73 aa18.47■□□□□ 0.55
SHANK2-220ENST00000608988 ISLRO14498 428 aa18.47■□□□□ 0.55
SHANK2-220ENST00000608988 PROP1O75360 226 aa18.47■□□□□ 0.55
SHANK2-220ENST00000608988 NPSP0C0P6 89 aa18.47■□□□□ 0.55
SHANK2-220ENST00000608988 ATP5IP56385 69 aaPredicted RBP18.47■□□□□ 0.55
SHANK2-220ENST00000608988 SUMO1P63165 101 aaKnown RBP18.47■□□□□ 0.55
SHANK2-220ENST00000608988 TMEM136Q6ZRR5 245 aa18.47■□□□□ 0.55
SHANK2-220ENST00000608988 OR8I2Q8N0Y5 310 aa18.47■□□□□ 0.55
SHANK2-220ENST00000608988 PNKDQ8N490 385 aa18.47■□□□□ 0.55
SHANK2-220ENST00000608988 SLC24A4Q8NFF2 622 aa18.47■□□□□ 0.55
SHANK2-220ENST00000608988 PPP1R35Q8TAP8 253 aa18.47■□□□□ 0.55
SHANK2-220ENST00000608988 SSMEM1Q8WWF3 244 aa18.47■□□□□ 0.55
SHANK2-220ENST00000608988 SLC35E1Q96K37 410 aa18.47■□□□□ 0.55
SHANK2-220ENST00000608988 SEPSECSQ9HD40 501 aaKnown RBP18.47■□□□□ 0.55
SHANK2-220ENST00000608988 ENY2Q9NPA8 101 aa18.47■□□□□ 0.55
SHANK2-220ENST00000608988 GNG12Q9UBI6 72 aa18.47■□□□□ 0.55
SHANK2-220ENST00000608988 A6NNC1 897 aa18.46■□□□□ 0.55
SHANK2-220ENST00000608988 CD33P20138 364 aa18.46■□□□□ 0.55
SHANK2-220ENST00000608988 LINC00205P59089 165 aa18.46■□□□□ 0.55
SHANK2-220ENST00000608988 TIGITQ495A1 244 aa18.46■□□□□ 0.55
SHANK2-220ENST00000608988 CENPWQ5EE01 88 aa18.46■□□□□ 0.55
SHANK2-220ENST00000608988 ABHD12Q8N2K0 398 aa18.46■□□□□ 0.55
SHANK2-220ENST00000608988 RFESDQ8TAC1 157 aa18.46■□□□□ 0.55
SHANK2-220ENST00000608988 NAT8BQ9UHF3 227 aa18.46■□□□□ 0.55
SHANK2-220ENST00000608988 F2RL2O00254 374 aa18.46■□□□□ 0.54
SHANK2-220ENST00000608988 AMY1AP04745 511 aa18.46■□□□□ 0.54
SHANK2-220ENST00000608988 TDGF1P13385 188 aa18.46■□□□□ 0.54
SHANK2-220ENST00000608988 IGHV1-2P23083 117 aa18.46■□□□□ 0.54
SHANK2-220ENST00000608988 MRPS11P82912 194 aaKnown RBP18.46■□□□□ 0.54
SHANK2-220ENST00000608988 C19orf35Q6ZS72 473 aa18.46■□□□□ 0.54
SHANK2-220ENST00000608988 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.46■□□□□ 0.54
SHANK2-220ENST00000608988 ST6GALNAC3Q8NDV1 305 aa18.46■□□□□ 0.54
SHANK2-220ENST00000608988 OR4P4Q8NGL7 312 aa18.46■□□□□ 0.54
SHANK2-220ENST00000608988 NEUROG1Q92886 237 aa18.46■□□□□ 0.54
SHANK2-220ENST00000608988 RAB9BQ9NP90 201 aa18.46■□□□□ 0.54
SHANK2-220ENST00000608988 NRN1Q9NPD7 142 aa18.46■□□□□ 0.54
SHANK2-220ENST00000608988 TECRQ9NZ01 308 aaKnown RBP18.46■□□□□ 0.54
SHANK2-220ENST00000608988 TBL2Q9Y4P3 447 aaKnown RBP18.46■□□□□ 0.54
SHANK2-220ENST00000608988 IGHV3-64DA0A0J9YX35 117 aa18.45■□□□□ 0.54
SHANK2-220ENST00000608988 RAB7AP51149 207 aa18.45■□□□□ 0.54
SHANK2-220ENST00000608988 KRTDAPP60985 99 aa18.45■□□□□ 0.54
SHANK2-220ENST00000608988 HSPE1P61604 102 aaKnown RBP18.45■□□□□ 0.54
SHANK2-220ENST00000608988 SPATA31B1PQ5VZV4 182 aa18.45■□□□□ 0.54
SHANK2-220ENST00000608988 DDB2Q92466 427 aa18.45■□□□□ 0.54
SHANK2-220ENST00000608988 METRNQ9UJH8 293 aa18.45■□□□□ 0.54
SHANK2-220ENST00000608988 USF3Q68DE3 2245 aa18.44■□□□□ 0.54
SHANK2-220ENST00000608988 PRDX2P32119 198 aa18.44■□□□□ 0.54
SHANK2-220ENST00000608988 RASL11AQ6T310 242 aa18.44■□□□□ 0.54
SHANK2-220ENST00000608988 PQLC2Q6ZP29 291 aa18.44■□□□□ 0.54
SHANK2-220ENST00000608988 KLHDC1Q8N7A1 406 aa18.44■□□□□ 0.54
SHANK2-220ENST00000608988 NCOR1P1Q9H4R4 102 aa18.44■□□□□ 0.54
SHANK2-220ENST00000608988 TMEM14BQ9NUH8 114 aa18.44■□□□□ 0.54
SHANK2-220ENST00000608988 LAMA1P25391 3075 aa18.44■□□□□ 0.54
SHANK2-220ENST00000608988 TRGV5A0A0B4J1U4 118 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 LINC00869P0C866 280 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 AMTP48728 403 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 LINC00696Q6ZRV3 163 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 CXorf67Q86X51 503 aaPredicted RBP18.43■□□□□ 0.54
SHANK2-220ENST00000608988 MSL2Q9HCI7 577 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 SMIM27A0A1W2PRY6 76 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 PATE3B3GLJ2 98 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 F2Z2F3 143 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 MGST3O14880 152 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 TIMM8AO60220 97 aaPredicted RBP18.43■□□□□ 0.54
SHANK2-220ENST00000608988 FOXH1O75593 365 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 CGAP01215 116 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 CD46P15529 392 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 PRRX1P54821 245 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 SPATA45Q537H7 98 aa18.43■□□□□ 0.54
SHANK2-220ENST00000608988 VASH2Q86V25 355 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms