RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 ATG4DQ86TL0 474 aaPredicted RBP4.28□□□□□ -1.72
SSX9-202ENST00000608568 MDS2Q8NDY4 140 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 TMEM171Q8WVE6 324 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 RNF133Q8WVZ7 376 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 DAZLQ92904 295 aaKnown RBP4.28□□□□□ -1.72
SSX9-202ENST00000608568 RAB1CQ92928 201 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 LHX4Q969G2 390 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 TM4SF19Q96DZ7 209 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 SPACA9Q96E40 222 aaPredicted RBP4.28□□□□□ -1.72
SSX9-202ENST00000608568 SFRP2Q96HF1 295 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 C1orf147Q96MC9 270 aaPredicted RBP4.28□□□□□ -1.72
SSX9-202ENST00000608568 TSSK2Q96PF2 358 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 UHRF2Q96PU4 802 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 PECRQ9BY49 303 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 ULBP2Q9BZM5 246 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 TMEM222Q9H0R3 208 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 ZNF665Q9H7R5 613 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 KCNIP2Q9NS61 270 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 RPRMQ9NS64 109 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 CLEC5AQ9NY25 188 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 IL36BQ9NZH7 164 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 ABI3Q9P2A4 366 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 COPS7AQ9UBW8 275 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 POLR1DQ9Y2S0 133 aa4.28□□□□□ -1.72
SSX9-202ENST00000608568 ALPK2Q86TB3 2170 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 ABCA1O95477 2261 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 IGKV1D-42A0A075B6H8 117 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 A0A0A6YYD4 124 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 CENPVL1A0A0U1RR11 272 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 C3orf85A0A1B0GTC6 90 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 GLOD5A6NK44 160 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 FAM90A26D6RGX4 464 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 FAM229AH3BQW9 127 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 SDCBPO00560 298 aaPredicted RBP4.27□□□□□ -1.73
SSX9-202ENST00000608568 SOCS1O15524 211 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 CRXO43186 299 aaPredicted RBP4.27□□□□□ -1.73
SSX9-202ENST00000608568 ZNF207O43670 478 aaKnown RBP4.27□□□□□ -1.73
SSX9-202ENST00000608568 HLA-DQA1P01909 254 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 BGLAPP02818 100 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 C8orf89P0DMQ9 161 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 SMIM10L1P0DMW3 83 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 MDKP21741 143 aaPredicted RBP4.27□□□□□ -1.73
SSX9-202ENST00000608568 PTGER1P34995 402 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 CDKN1AP38936 164 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 AMTP48728 403 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 CYB561P49447 251 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 KRTDAPP60985 99 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 MRPS34P82930 218 aaKnown RBP4.27□□□□□ -1.73
SSX9-202ENST00000608568 RPL18Q07020 188 aaKnown RBP4.27□□□□□ -1.73
SSX9-202ENST00000608568 TMEM267Q0VDI3 215 aaPredicted RBP4.27□□□□□ -1.73
SSX9-202ENST00000608568 ZP4Q12836 540 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 SGCBQ16585 318 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 FFAR4Q5NUL3 377 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 BVES-AS1Q5T3Y7 98 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 GFRALQ6UXV0 394 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 C16orf47Q6ZP98 133 aaPredicted RBP4.27□□□□□ -1.73
SSX9-202ENST00000608568 FA2HQ7L5A8 372 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 LYZL2Q7Z4W2 148 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 CPEB2Q7Z5Q1 589 aaKnown RBP4.27□□□□□ -1.73
SSX9-202ENST00000608568 ZNF695Q8IW36 515 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 FAM58AQ8N1B3 248 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 RPRMLQ8N4K4 120 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 BCORP1Q8N888 145 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 NECAP1Q8NC96 275 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 OR51T1Q8NGJ9 327 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 OR52M1Q8NGK5 317 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 OR10G9Q8NGN4 311 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 ZNF721Q8TF20 911 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 WFDC12Q8WWY7 111 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 RERGQ96A58 199 aaPredicted RBP4.27□□□□□ -1.73
SSX9-202ENST00000608568 MRAP2Q96G30 205 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 SMIM10Q96HG1 83 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 ARHGAP5-AS1Q96IT6 56 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 ZNF479Q96JC4 524 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 AP1S3Q96PC3 154 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 ADOQ96SZ5 270 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 GPER1Q99527 375 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 ST6GALNAC5Q9BVH7 336 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 SFXN3Q9BWM7 321 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 PKIBQ9C010 78 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 WDR61Q9GZS3 305 aaKnown RBP4.27□□□□□ -1.73
SSX9-202ENST00000608568 TXNIPQ9H3M7 391 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 SLC7A10Q9NS82 523 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 ZNF581Q9P0T4 197 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 KLHL13Q9P2N7 655 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 TP53TG3Q9ULZ0 132 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 PPP1R3CQ9UQK1 317 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 ARL2-SNX15V9GYD0 113 aa4.27□□□□□ -1.73
SSX9-202ENST00000608568 CUBNO60494 3623 aa4.26□□□□□ -1.73
SSX9-202ENST00000608568 TRAV36DV7A0A075B6V5 113 aa4.26□□□□□ -1.73
SSX9-202ENST00000608568 IGKV3D-11A0A0A0MRZ8 115 aa4.26□□□□□ -1.73
SSX9-202ENST00000608568 TRAV17A0A0B4J275 112 aa4.26□□□□□ -1.73
SSX9-202ENST00000608568 TRGV8A0A0C4DH27 118 aa4.26□□□□□ -1.73
SSX9-202ENST00000608568 PSMB11A5LHX3 300 aa4.26□□□□□ -1.73
SSX9-202ENST00000608568 PINLYPA6NC86 204 aa4.26□□□□□ -1.73
SSX9-202ENST00000608568 KIAA1324LA8MWY0 1029 aaPredicted RBP4.26□□□□□ -1.73
SSX9-202ENST00000608568 C9JCJ5 164 aa4.26□□□□□ -1.73
SSX9-202ENST00000608568 H3BRM9 83 aa4.26□□□□□ -1.73
SSX9-202ENST00000608568 H3BS24 57 aa4.26□□□□□ -1.73
SSX9-202ENST00000608568 K7EP34 96 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms