RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SCGNO76038 276 aa11.13□□□□□ -0.63
CTSA-216ENST00000607212 SPAG16Q8N0X2 631 aa11.13□□□□□ -0.63
CTSA-216ENST00000607212 LINC00476Q8WZB0 136 aa11.13□□□□□ -0.63
CTSA-216ENST00000607212 OVOL2Q9BRP0 275 aa11.13□□□□□ -0.63
CTSA-216ENST00000607212 AIFM2Q9BRQ8 373 aa11.13□□□□□ -0.63
CTSA-216ENST00000607212 THYN1Q9P016 225 aa11.13□□□□□ -0.63
CTSA-216ENST00000607212 UBQLN2Q9UHD9 624 aa11.13□□□□□ -0.63
CTSA-216ENST00000607212 DAPK2Q9UIK4 370 aa11.13□□□□□ -0.63
CTSA-216ENST00000607212 UFC1Q9Y3C8 167 aa11.13□□□□□ -0.63
CTSA-216ENST00000607212 A0A0J9YWU9 116 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 NUPR2A6NF83 97 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 NOTOA8MTQ0 251 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 A8MWP6 167 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 CYB5BO43169 146 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 IGLV2-14P01704 120 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 CRYGCP07315 174 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 CTRB1P17538 263 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 APOC4P55056 127 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 FXYD4P59646 89 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 CATR1Q13166 79 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 CTRB2Q6GPI1 263 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 UNQ9165/PRO28630Q6UXU0 137 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 OR2C3Q8N628 320 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 OR4A5Q8NH83 315 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 MARC2Q969Z3 335 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 COMMD5Q9GZQ3 224 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 CCL28Q9NRJ3 127 aa11.12□□□□□ -0.63
CTSA-216ENST00000607212 ALMS1Q8TCU4 4167 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 TRAV25A0A0B4J276 109 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 A0A1B0GW64 132 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 SULT1C2O00338 296 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 FCER2P06734 321 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 PSMB9P28065 219 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 FCGR2CP31995 323 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 DEFB135Q30KP9 77 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 CNPY1Q3B7I2 92 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 TIMM50Q3ZCQ8 353 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 DMBX1Q8NFW5 382 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 OR13F1Q8NGS4 319 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 LGALS14Q8TCE9 139 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 MRPS26Q9BYN8 205 aaKnown RBP11.11□□□□□ -0.63
CTSA-216ENST00000607212 SLC5A7Q9GZV3 580 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 BET1LQ9NYM9 111 aa11.11□□□□□ -0.63
CTSA-216ENST00000607212 MRPL27Q9P0M9 148 aaKnown RBP11.11□□□□□ -0.63
CTSA-216ENST00000607212 IGLV11-55A0A075B6I3 123 aa11.1□□□□□ -0.63
CTSA-216ENST00000607212 SPRY2O43597 315 aa11.1□□□□□ -0.63
CTSA-216ENST00000607212 TNFAIP8O95379 198 aa11.1□□□□□ -0.63
CTSA-216ENST00000607212 PTHLHP12272 177 aa11.1□□□□□ -0.63
CTSA-216ENST00000607212 RPA2P15927 270 aa11.1□□□□□ -0.63
CTSA-216ENST00000607212 LAMTOR1Q6IAA8 161 aa11.1□□□□□ -0.63
CTSA-216ENST00000607212 SLC25A24Q6NUK1 477 aa11.1□□□□□ -0.63
CTSA-216ENST00000607212 LYG2Q86SG7 212 aa11.1□□□□□ -0.63
CTSA-216ENST00000607212 NR2C2APQ86WQ0 139 aa11.1□□□□□ -0.63
CTSA-216ENST00000607212 BEST4Q8NFU0 473 aa11.1□□□□□ -0.63
CTSA-216ENST00000607212 TSC22D3Q99576 134 aa11.1□□□□□ -0.63
CTSA-216ENST00000607212 C20orf24Q9BUV8 137 aa11.1□□□□□ -0.63
CTSA-216ENST00000607212 HINT2Q9BX68 163 aa11.1□□□□□ -0.63
CTSA-216ENST00000607212 NDUFA13Q9P0J0 144 aa11.1□□□□□ -0.63
CTSA-216ENST00000607212 KLK5Q9Y337 293 aaPredicted RBP11.1□□□□□ -0.63
CTSA-216ENST00000607212 TRAV18A0A075B6X5 111 aa11.09□□□□□ -0.63
CTSA-216ENST00000607212 SMIM31A0A1B0GVY4 71 aa11.09□□□□□ -0.63
CTSA-216ENST00000607212 SSX5O60225 188 aa11.09□□□□□ -0.63
CTSA-216ENST00000607212 NQO2P16083 231 aa11.09□□□□□ -0.63
CTSA-216ENST00000607212 RPL35AP18077 110 aaKnown RBP11.09□□□□□ -0.63
CTSA-216ENST00000607212 GALP22466 123 aa11.09□□□□□ -0.63
CTSA-216ENST00000607212 BMI1P35226 326 aa11.09□□□□□ -0.63
CTSA-216ENST00000607212 RPL5P46777 297 aaKnown RBP11.09□□□□□ -0.63
CTSA-216ENST00000607212 OR2B8PP59922 312 aa11.09□□□□□ -0.63
CTSA-216ENST00000607212 AADACL3Q5VUY0 350 aa11.09□□□□□ -0.63
CTSA-216ENST00000607212 STPG3Q8N7X2 389 aa11.09□□□□□ -0.63
CTSA-216ENST00000607212 UBAC2Q8NBM4 344 aa11.09□□□□□ -0.63
CTSA-216ENST00000607212 OR51H1Q8NH63 302 aa11.09□□□□□ -0.63
CTSA-216ENST00000607212 ZNF502Q8TBZ5 544 aa11.09□□□□□ -0.63
CTSA-216ENST00000607212 TXNL4BQ9NX01 149 aaKnown RBP11.09□□□□□ -0.63
CTSA-216ENST00000607212 RHBDL2Q9NX52 303 aa11.09□□□□□ -0.63
CTSA-216ENST00000607212 SSR3Q9UNL2 185 aa11.09□□□□□ -0.63
CTSA-216ENST00000607212 IGHV3-21A0A0B4J1V1 117 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 TRAV3A0A0B4J244 114 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 OR2T8A6NH00 312 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 TGOLN2O43493 480 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 HPRT1P00492 218 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 PPYP01298 95 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 BRWD1-AS2P59051 145 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 TAS2R31P59538 309 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 HERV-K104P61576 105 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 ERVK-16P61578 105 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 MXD1Q05195 221 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 EIF4EBP1Q13541 118 aaPredicted RBP11.08□□□□□ -0.64
CTSA-216ENST00000607212 SFXN4Q6P4A7 337 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 TMEM17Q86X19 198 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 TMEM217Q8N7C4 229 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 GVQW1Q8N7I0 195 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 ZBTB34Q8NCN2 500 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 SPAG8Q99932 426 aaPredicted RBP11.08□□□□□ -0.64
CTSA-216ENST00000607212 QTRT1Q9BXR0 403 aaKnown RBP11.08□□□□□ -0.64
CTSA-216ENST00000607212 TMEM140Q9NV12 185 aa11.08□□□□□ -0.64
CTSA-216ENST00000607212 UPK2O00526 184 aa11.07□□□□□ -0.64
CTSA-216ENST00000607212 ZNF207O43670 478 aaKnown RBP11.07□□□□□ -0.64
CTSA-216ENST00000607212 OR13C7P0DN81 318 aa11.07□□□□□ -0.64
CTSA-216ENST00000607212 ELLP55199 621 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms