RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 NDUFAF3Q9BU61 184 aa11.19□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 CENPOQ9BU64 300 aa11.19□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 C9orf16Q9BUW7 83 aa11.19□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 PKD1P98161 4303 aa11.19□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 IGKV3-7A0A075B6H7 116 aa11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 IGHV3OR16-8A0A075B7F1 116 aa11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 IGHV4-28A0A0C4DH34 117 aa11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 C15orf61A6NNL5 157 aa11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 J3QRK9 145 aa11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 MYL12BO14950 172 aa11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 ZNF207O43670 478 aaKnown RBP11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 IFNA10P01566 189 aa11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 AMBPP02760 352 aa11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 CDK1P06493 297 aa11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 FCGR3AP08637 254 aa11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 PUSL1Q8N0Z8 303 aaKnown RBP11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 MAFIPQ8WZ33 124 aa11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 BSCL2Q96G97 398 aaPredicted RBP11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 CMTM3Q96MX0 182 aa11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 DNAH17Q9UFH2 4485 aa11.18□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 DEFB131BA0A096LNP1 70 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 EFCAB10A6NFE3 127 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 C16orf90A8MZG2 172 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 K7EMT4 169 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 IFNA21P01568 189 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 IFNA17P01571 189 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 MIFP14174 115 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 ST3GAL4Q11206 333 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 SSX1Q16384 188 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 HSD17B12Q53GQ0 312 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 PLAC9Q5JTB6 97 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 SPSB3Q6PJ21 355 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 UBE2DNLQ8IWF7 75 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 MS4A15Q8N5U1 240 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 VN1R17PQ8TDU5 208 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 RNF2Q99496 336 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 CHRDL1Q9BU40 450 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 ETV7Q9Y603 341 aa11.17□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 IGLV2-18A0A075B6J9 118 aa11.16□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 HRASP01112 189 aa11.16□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 RBMY1A1P0DJD3 496 aaKnown RBP11.16□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 HLA-GP17693 338 aa11.16□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 WNT4P56705 351 aa11.16□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 PAFAH1B2P68402 229 aa11.16□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 IRF3Q14653 427 aa11.16□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 RBMY1FQ15415 496 aaKnown RBP11.16□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 H1FOOQ8IZA3 346 aaPredicted RBP11.16□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 TCTEX1D2Q8WW35 142 aa11.16□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 SMPXQ9UHP9 88 aa11.16□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 ERICH4A6NGS2 130 aa11.15□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 C15orf62A8K5M9 175 aa11.15□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 SLC22A5O76082 557 aa11.15□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 RPL30P62888 115 aaKnown RBP11.15□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 LIPKQ5VXJ0 399 aa11.15□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 STHQ8IWL8 128 aa11.15□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 GBGT1Q8N5D6 347 aa11.15□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 UBAC2Q8NBM4 344 aa11.15□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 RAB3CQ96E17 227 aa11.15□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 RHPN1-AS1Q9BWJ2 59 aa11.15□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 HRASLSQ9HDD0 168 aa11.15□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 SPATA2Q9UM82 520 aa11.15□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 RBMX2Q9Y388 322 aaKnown RBP11.15□□□□□ -0.62
NEDD8-MDP1-204ENST00000605847 SLC17A2O00624 439 aa11.14□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 DENRO43583 198 aaKnown RBP11.14□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 PLA2G7Q13093 441 aa11.14□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 RAB11BQ15907 218 aa11.14□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 TMEM116Q8NCL8 245 aa11.14□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 HSD17B10Q99714 261 aaKnown RBP11.14□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 SMPD3Q9NY59 655 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 HSPG2P98160 4391 aa11.14□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 A0A075B6Q4 140 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 IGHV7-4-1A0A0J9YVY3 117 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 CHEK1O14757 476 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 CD37P11049 281 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 TALDO1P37837 337 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 RANBP1P43487 201 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 TMEM41BQ5BJD5 291 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 C1orf134Q5TEV5 83 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 LEMD1Q68G75 181 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 SLC25A24Q6NUK1 477 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 ZFP1Q6P2D0 407 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 Q8N1X5 172 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 AIFM2Q9BRQ8 373 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 COMMD5Q9GZQ3 224 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 KCNK7Q9Y2U2 307 aa11.13□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 ELOA3CA0A087WX78 387 aaPredicted RBP11.12□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 IGHV3-49A0A0A0MS15 119 aa11.12□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 CGB1A6NKQ9 187 aa11.12□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 DNASE2O00115 360 aaPredicted RBP11.12□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 GADD45AP24522 165 aa11.12□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 DEFB131AP59861 70 aa11.12□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 OR2B8PP59922 312 aa11.12□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 Q56UQ5 140 aa11.12□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 Q6ZR54 194 aa11.12□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 Q6ZRM9 215 aa11.12□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 ZNF767PQ75MW2 155 aa11.12□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 ATP6V0BQ99437 205 aa11.12□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 BET1LQ9NYM9 111 aa11.12□□□□□ -0.63
NEDD8-MDP1-204ENST00000605847 C21orf62Q9NYP8 219 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms