RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 ZC4H2Q9NQZ6 224 aa8.1□□□□□ -1.11
UPF1-213ENST00000601981 CYTL1Q9NRR1 136 aa8.1□□□□□ -1.11
UPF1-213ENST00000601981 TNFRSF19Q9NS68 423 aa8.1□□□□□ -1.11
UPF1-213ENST00000601981 IGHV1-3A0A0C4DH29 117 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 MARCH11A6NNE9 402 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 ATP6V1G1O75348 118 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 VENTXO95231 258 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 SPDEFO95238 335 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 KRASP01116 189 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 TPT1P13693 172 aaKnown RBP8.09□□□□□ -1.11
UPF1-213ENST00000601981 G6PCP35575 357 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 REG1BP48304 166 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 EIF5AP63241 154 aaKnown RBP8.09□□□□□ -1.11
UPF1-213ENST00000601981 TAGLNQ01995 201 aaKnown RBP8.09□□□□□ -1.11
UPF1-213ENST00000601981 HES1Q14469 280 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 CLLU1Q5K131 121 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 LDLRAD2Q5SZI1 272 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 DHRS7BQ6IAN0 325 aaPredicted RBP8.09□□□□□ -1.11
UPF1-213ENST00000601981 H2BFWTQ7Z2G1 175 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 C16orf82Q7Z2V1 217 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 PRIMA1Q86XR5 153 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 DYNAPQ8N1N2 210 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 OR2C3Q8N628 320 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 R3HDM4Q96D70 268 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 DUX5Q96PT3 197 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 MDFIQ99750 246 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 SLC25A31Q9H0C2 315 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 LYRM2Q9NU23 88 aaPredicted RBP8.09□□□□□ -1.11
UPF1-213ENST00000601981 FBXL17Q9UF56 701 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 TCF19Q9Y242 345 aa8.09□□□□□ -1.11
UPF1-213ENST00000601981 A0A1W2PPI3 338 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 RPS10-NUDT3A0A1W2PQS6 291 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 TIMM23O14925 209 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 SYNGR2O43760 224 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 MED6O75586 246 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 APOA2P02652 100 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 RRASP10301 218 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 NQO2P16083 231 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 CD1BP29016 333 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 LINC00205P59089 165 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 TAS2R30P59541 319 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 RAB14P61106 215 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 ERVK-16P61578 105 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 EWSR1Q01844 656 aaKnown RBP eCLIP8.08□□□□□ -1.12
UPF1-213ENST00000601981 BAXQ07812 192 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 LY6EQ16553 131 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 POU2AF1Q16633 256 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 RTL8BQ17RB0 113 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 IZUMO4Q1ZYL8 232 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 AARDQ4LEZ3 155 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 THNSL2Q86YJ6 484 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 ZNF383Q8NA42 475 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 TMEM158Q8WZ71 300 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 ST6GALNAC6Q969X2 333 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 MAGT1Q9H0U3 335 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 ESM1Q9NQ30 184 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.08□□□□□ -1.12
UPF1-213ENST00000601981 HSPB7Q9UBY9 170 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 CACFD1Q9UGQ2 172 aa8.08□□□□□ -1.12
UPF1-213ENST00000601981 M0QZK8 103 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 CHST1O43916 411 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 TMEM50AO95807 157 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 SNRNP70P08621 437 aaKnown RBP8.07□□□□□ -1.12
UPF1-213ENST00000601981 CT45A6P0DMU7 189 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 CT45A5P0DMU8 189 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 CT45A7P0DMV0 189 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 TMEM11P17152 192 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 PAX6P26367 422 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 MC5RP33032 325 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 RAB13P51153 203 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 CAV2P51636 162 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 PAX9P55771 341 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 RPL23AP62750 156 aaKnown RBP8.07□□□□□ -1.12
UPF1-213ENST00000601981 TNFRSF9Q07011 255 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 HABP2Q14520 560 aaPredicted RBP8.07□□□□□ -1.12
UPF1-213ENST00000601981 ALKAL2Q6UX46 152 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 BAP18Q8IXM2 172 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 OR2T10Q8NGZ9 312 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 MRPL20Q9BYC9 149 aaKnown RBP8.07□□□□□ -1.12
UPF1-213ENST00000601981 NPFFR1Q9GZQ6 430 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 SLC35D1Q9NTN3 355 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 WSB1Q9Y6I7 421 aa8.07□□□□□ -1.12
UPF1-213ENST00000601981 IGSF23A1L1A6 192 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 LINC00862A6NCI5 91 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 A6NDX4 124 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 FAM181BA6NEQ2 426 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 FAM24AA6NFZ4 105 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 JTBO76095 146 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 NXPH3O95157 252 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 LY86O95711 162 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 CRYZL1O95825 349 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 MOSP00540 346 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 HRASP01112 189 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 IGKV1D-33P01593 117 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 IGKV1-33P01594 117 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 UBE2KP61086 200 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 DIAPH2-AS1Q14236 149 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 STX12Q86Y82 276 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 SLC7A5P1Q8MH63 180 aa8.06□□□□□ -1.12
UPF1-213ENST00000601981 TMEM252Q8N6L7 170 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms