RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 HMX3A6NHT5 357 aa13.19□□□□□ -0.3
HERC3-214ENST00000601319 UPK2O00526 184 aa13.19□□□□□ -0.3
HERC3-214ENST00000601319 RGS5O15539 181 aa13.19□□□□□ -0.3
HERC3-214ENST00000601319 NOL3O60936 208 aaKnown RBP13.19□□□□□ -0.3
HERC3-214ENST00000601319 SAP30O75446 220 aa13.19□□□□□ -0.3
HERC3-214ENST00000601319 S100GP29377 79 aa13.19□□□□□ -0.3
HERC3-214ENST00000601319 ECI1P42126 302 aa13.19□□□□□ -0.3
HERC3-214ENST00000601319 OR2B8PP59922 312 aa13.19□□□□□ -0.3
HERC3-214ENST00000601319 ERVK-16P61578 105 aa13.19□□□□□ -0.3
HERC3-214ENST00000601319 SSBP1Q04837 148 aaKnown RBP13.19□□□□□ -0.3
HERC3-214ENST00000601319 RNASE10Q5GAN6 216 aaKnown RBP13.19□□□□□ -0.3
HERC3-214ENST00000601319 SLC38A6Q8IZM9 456 aa13.19□□□□□ -0.3
HERC3-214ENST00000601319 DMBX1Q8NFW5 382 aa13.19□□□□□ -0.3
HERC3-214ENST00000601319 FYTTD1Q96QD9 318 aaKnown RBP13.19□□□□□ -0.3
HERC3-214ENST00000601319 RABL2AQ9UBK7 228 aaPredicted RBP13.19□□□□□ -0.3
HERC3-214ENST00000601319 RABL2BQ9UNT1 228 aa13.19□□□□□ -0.3
HERC3-214ENST00000601319 DPPA5A6NC42 116 aa13.18□□□□□ -0.3
HERC3-214ENST00000601319 CGB1A6NKQ9 187 aa13.18□□□□□ -0.3
HERC3-214ENST00000601319 H3BMQ9 156 aa13.18□□□□□ -0.3
HERC3-214ENST00000601319 GABARAPH6UMI1 98 aa13.18□□□□□ -0.3
HERC3-214ENST00000601319 DHFRP00374 187 aa13.18□□□□□ -0.3
HERC3-214ENST00000601319 PRH1P02810 166 aa13.18□□□□□ -0.3
HERC3-214ENST00000601319 AREGP15514 252 aa13.18□□□□□ -0.3
HERC3-214ENST00000601319 CTRB1P17538 263 aa13.18□□□□□ -0.3
HERC3-214ENST00000601319 EXOSC2Q13868 293 aaKnown RBP13.18□□□□□ -0.3
HERC3-214ENST00000601319 KLF5Q13887 457 aaPredicted RBP13.18□□□□□ -0.3
HERC3-214ENST00000601319 ZNF585BQ52M93 769 aa13.18□□□□□ -0.3
HERC3-214ENST00000601319 CTRB2Q6GPI1 263 aa13.18□□□□□ -0.3
HERC3-214ENST00000601319 THOC7Q6I9Y2 204 aaKnown RBP13.18□□□□□ -0.3
HERC3-214ENST00000601319 LHFPL1Q86WI0 220 aa13.18□□□□□ -0.3
HERC3-214ENST00000601319 FCAMRQ8WWV6 532 aa13.18□□□□□ -0.3
HERC3-214ENST00000601319 ISOC1Q96CN7 298 aa13.18□□□□□ -0.3
HERC3-214ENST00000601319 ZNF486Q96H40 463 aaPredicted RBP13.18□□□□□ -0.3
HERC3-214ENST00000601319 COMMD5Q9GZQ3 224 aa13.18□□□□□ -0.3
HERC3-214ENST00000601319 M0QYG6 137 aa13.17□□□□□ -0.3
HERC3-214ENST00000601319 CTDSP2O14595 271 aa13.17□□□□□ -0.3
HERC3-214ENST00000601319 TRBV12-3P01733 135 aa13.17□□□□□ -0.3
HERC3-214ENST00000601319 CD74P04233 296 aa13.17□□□□□ -0.3
HERC3-214ENST00000601319 HIST1H1BP16401 226 aaKnown RBP13.17□□□□□ -0.3
HERC3-214ENST00000601319 PSMB6P28072 239 aa13.17□□□□□ -0.3
HERC3-214ENST00000601319 ATP5G2Q06055 141 aa13.17□□□□□ -0.3
HERC3-214ENST00000601319 C15orf32Q32M92 178 aa13.17□□□□□ -0.3
HERC3-214ENST00000601319 RNASE12Q5GAN4 147 aaKnown RBP13.17□□□□□ -0.3
HERC3-214ENST00000601319 OR6Q1Q8NGQ2 317 aa13.17□□□□□ -0.3
HERC3-214ENST00000601319 ELOVL1Q9BW60 279 aa13.17□□□□□ -0.3
HERC3-214ENST00000601319 LSM4Q9Y4Z0 139 aaKnown RBP13.17□□□□□ -0.3
HERC3-214ENST00000601319 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.16□□□□□ -0.3
HERC3-214ENST00000601319 TRAV3A0A0B4J244 114 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 IGLC7A0M8Q6 106 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 CD3DP04234 171 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 IFNA6P05013 189 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 MYOD1P15172 320 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 PTBP1P26599 531 aaKnown RBP eCLIP13.16□□□□□ -0.3
HERC3-214ENST00000601319 LPAR6P43657 344 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 TAS2R19P59542 299 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 RND3P61587 244 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 PHLDA2Q53GA4 152 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 DEFB121Q5J5C9 76 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 HSD17B13Q7Z5P4 300 aaPredicted RBP13.16□□□□□ -0.3
HERC3-214ENST00000601319 TBC1D26Q86UD7 250 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 TMEM229BQ8NBD8 167 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 SMIM4Q8WVI0 70 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 FANCD2OSQ96PS1 177 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 OR4C12Q96R67 309 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 PRR25Q96S07 402 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 B9D2Q9BPU9 175 aa13.16□□□□□ -0.3
HERC3-214ENST00000601319 QTRT1Q9BXR0 403 aaKnown RBP13.16□□□□□ -0.3
HERC3-214ENST00000601319 SLIRPQ9GZT3 109 aaKnown RBP13.16□□□□□ -0.3
HERC3-214ENST00000601319 CTDSPLO15194 276 aa13.15□□□□□ -0.3
HERC3-214ENST00000601319 OR2J3O76001 311 aa13.15□□□□□ -0.3
HERC3-214ENST00000601319 OR9G4Q8NGQ1 327 aa13.15□□□□□ -0.3
HERC3-214ENST00000601319 IGLV11-55A0A075B6I3 123 aa13.14□□□□□ -0.31
HERC3-214ENST00000601319 BMPR1BO00238 502 aa13.14□□□□□ -0.31
HERC3-214ENST00000601319 KRASP01116 189 aa13.14□□□□□ -0.31
HERC3-214ENST00000601319 IGLV1-51P01701 117 aa13.14□□□□□ -0.31
HERC3-214ENST00000601319 RPEL1Q2QD12 228 aa13.14□□□□□ -0.31
HERC3-214ENST00000601319 C19orf35Q6ZS72 473 aa13.14□□□□□ -0.31
HERC3-214ENST00000601319 TSC22D3Q99576 134 aa13.14□□□□□ -0.31
HERC3-214ENST00000601319 SIGLEC8Q9NYZ4 499 aa13.14□□□□□ -0.31
HERC3-214ENST00000601319 FBXL7Q9UJT9 491 aa13.14□□□□□ -0.31
HERC3-214ENST00000601319 RAB3DO95716 219 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 G6PCP35575 357 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 SYNJ2BPP57105 145 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 MEF2DQ14814 521 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 TATDN3Q17R31 274 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 STEAP1BQ6NZ63 245 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 IL34Q6ZMJ4 242 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 OR4D10Q8NGI6 311 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 OR1L8Q8NGR8 309 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 OR5B3Q8NH48 314 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 DIRAS2Q96HU8 199 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 KRTAP3-3Q9BYR6 98 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 KRTAP3-2Q9BYR7 98 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 NXF2Q9GZY0 626 aaKnown RBP13.13□□□□□ -0.31
HERC3-214ENST00000601319 PRNDQ9UKY0 176 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 DMRT1Q9Y5R6 373 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 CEPT1Q9Y6K0 416 aa13.13□□□□□ -0.31
HERC3-214ENST00000601319 TEX50A0A1B0GTY4 177 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 H0Y980 276 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 SNAPC5O75971 98 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms