RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 EIF4EBP1Q13541 118 aaPredicted RBP12.34□□□□□ -0.43
USE1-208ENST00000600970 RBMS2Q15434 407 aaKnown RBP12.34□□□□□ -0.43
USE1-208ENST00000600970 SSX9Q7RTT3 188 aa12.34□□□□□ -0.43
USE1-208ENST00000600970 OR5B3Q8NH48 314 aa12.34□□□□□ -0.43
USE1-208ENST00000600970 C11orf45Q8TAV5 145 aa12.34□□□□□ -0.43
USE1-208ENST00000600970 ELF5Q9UKW6 265 aaPredicted RBP12.34□□□□□ -0.43
USE1-208ENST00000600970 IGKV1D-13A0A0B4J2D9 117 aa12.33□□□□□ -0.44
USE1-208ENST00000600970 PTGES3LE9PB15 166 aa12.33□□□□□ -0.44
USE1-208ENST00000600970 SLC22A5O76082 557 aa12.33□□□□□ -0.44
USE1-208ENST00000600970 IGKV1-13P0DP09 117 aa12.33□□□□□ -0.44
USE1-208ENST00000600970 RPL8P62917 257 aaKnown RBP12.33□□□□□ -0.44
USE1-208ENST00000600970 LAMTOR1Q6IAA8 161 aa12.33□□□□□ -0.44
USE1-208ENST00000600970 TCTEX1D2Q8WW35 142 aa12.33□□□□□ -0.44
USE1-208ENST00000600970 TMEM190Q8WZ59 177 aa12.33□□□□□ -0.44
USE1-208ENST00000600970 HSD17B10Q99714 261 aaKnown RBP12.33□□□□□ -0.44
USE1-208ENST00000600970 RARRES2Q99969 163 aa12.33□□□□□ -0.44
USE1-208ENST00000600970 MFFQ9GZY8 342 aa12.33□□□□□ -0.44
USE1-208ENST00000600970 SPATA2Q9UM82 520 aa12.33□□□□□ -0.44
USE1-208ENST00000600970 OR4C46A6NHA9 309 aa12.32□□□□□ -0.44
USE1-208ENST00000600970 TGOLN2O43493 480 aa12.32□□□□□ -0.44
USE1-208ENST00000600970 IFNA4P05014 189 aa12.32□□□□□ -0.44
USE1-208ENST00000600970 RPA2P15927 270 aa12.32□□□□□ -0.44
USE1-208ENST00000600970 HLA-GP17693 338 aa12.32□□□□□ -0.44
USE1-208ENST00000600970 PTBP1P26599 531 aaKnown RBP eCLIP12.32□□□□□ -0.44
USE1-208ENST00000600970 IRF3Q14653 427 aa12.32□□□□□ -0.44
USE1-208ENST00000600970 TRAM1Q15629 374 aa12.32□□□□□ -0.44
USE1-208ENST00000600970 SSX1Q16384 188 aa12.32□□□□□ -0.44
USE1-208ENST00000600970 APRG1Q8IVJ8 170 aa12.32□□□□□ -0.44
USE1-208ENST00000600970 MFSD4AQ8N468 514 aa12.32□□□□□ -0.44
USE1-208ENST00000600970 C2CD4CQ8TF44 421 aa12.32□□□□□ -0.44
USE1-208ENST00000600970 FAT2Q9NYQ8 4349 aa12.32□□□□□ -0.44
USE1-208ENST00000600970 HRASP01112 189 aa12.31□□□□□ -0.44
USE1-208ENST00000600970 DTYMKP23919 212 aa12.31□□□□□ -0.44
USE1-208ENST00000600970 TCTAP57738 103 aa12.31□□□□□ -0.44
USE1-208ENST00000600970 OR2B8PP59922 312 aa12.31□□□□□ -0.44
USE1-208ENST00000600970 FABP5Q01469 135 aa12.31□□□□□ -0.44
USE1-208ENST00000600970 CD300LFQ8TDQ1 290 aa12.31□□□□□ -0.44
USE1-208ENST00000600970 GPHA2Q96T91 129 aa12.31□□□□□ -0.44
USE1-208ENST00000600970 CSTL1Q9H114 145 aa12.31□□□□□ -0.44
USE1-208ENST00000600970 C11orf68Q9H3H3 251 aaKnown RBP12.31□□□□□ -0.44
USE1-208ENST00000600970 DAZ1Q9NQZ3 744 aaKnown RBP12.31□□□□□ -0.44
USE1-208ENST00000600970 BET1LQ9NYM9 111 aa12.31□□□□□ -0.44
USE1-208ENST00000600970 DNAH2Q9P225 4427 aa12.3□□□□□ -0.44
USE1-208ENST00000600970 IGLC7A0M8Q6 106 aa12.3□□□□□ -0.44
USE1-208ENST00000600970 ERICH4A6NGS2 130 aa12.3□□□□□ -0.44
USE1-208ENST00000600970 MPTX1A8MV57 137 aa12.3□□□□□ -0.44
USE1-208ENST00000600970 CTSDP07339 412 aaPredicted RBP12.3□□□□□ -0.44
USE1-208ENST00000600970 CTXN2P0C2S0 81 aa12.3□□□□□ -0.44
USE1-208ENST00000600970 HSMCR30P0CW71 290 aa12.3□□□□□ -0.44
USE1-208ENST00000600970 RAB6AP20340 208 aa12.3□□□□□ -0.44
USE1-208ENST00000600970 PSMA1P25786 263 aaKnown RBP12.3□□□□□ -0.44
USE1-208ENST00000600970 ZNF124Q15973 351 aa12.3□□□□□ -0.44
USE1-208ENST00000600970 TIMM50Q3ZCQ8 353 aa12.3□□□□□ -0.44
USE1-208ENST00000600970 OR4A5Q8NH83 315 aa12.3□□□□□ -0.44
USE1-208ENST00000600970 TAS2R8Q9NYW2 309 aa12.3□□□□□ -0.44
USE1-208ENST00000600970 THYN1Q9P016 225 aa12.3□□□□□ -0.44
USE1-208ENST00000600970 OR2T8A6NH00 312 aa12.29□□□□□ -0.44
USE1-208ENST00000600970 OR10A3P58181 314 aa12.29□□□□□ -0.44
USE1-208ENST00000600970 ZNF66Q6ZN08 573 aa12.29□□□□□ -0.44
USE1-208ENST00000600970 OR11H2Q8NH07 326 aa12.29□□□□□ -0.44
USE1-208ENST00000600970 VN1R17PQ8TDU5 208 aa12.29□□□□□ -0.44
USE1-208ENST00000600970 C6orf62Q9GZU0 229 aaPredicted RBP12.29□□□□□ -0.44
USE1-208ENST00000600970 HRASLSQ9HDD0 168 aa12.29□□□□□ -0.44
USE1-208ENST00000600970 APLNQ9ULZ1 77 aa12.29□□□□□ -0.44
USE1-208ENST00000600970 IGHV3OR16-8A0A075B7F1 116 aa12.28□□□□□ -0.44
USE1-208ENST00000600970 METTL21EPA6NDL7 271 aa12.28□□□□□ -0.44
USE1-208ENST00000600970 NDUFA4O00483 81 aa12.28□□□□□ -0.44
USE1-208ENST00000600970 ZNF207O43670 478 aaKnown RBP12.28□□□□□ -0.44
USE1-208ENST00000600970 BSCL2Q96G97 398 aaPredicted RBP12.28□□□□□ -0.44
USE1-208ENST00000600970 C20orf24Q9BUV8 137 aa12.28□□□□□ -0.44
USE1-208ENST00000600970 TRAV3A0A0B4J244 114 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 A0A1B0GVY2 172 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 IFITM5A6NNB3 132 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 IGLL5B9A064 214 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 K7EMT4 169 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 DEFB4AO15263 64 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 MLLT11Q13015 90 aaPredicted RBP12.27□□□□□ -0.45
USE1-208ENST00000600970 CDNFQ49AH0 187 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 CNIH2Q6PI25 160 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 LINC00336Q6ZUF6 198 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 OR10W1Q8NGF6 305 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 SRSF8Q9BRL6 282 aaKnown RBP12.27□□□□□ -0.45
USE1-208ENST00000600970 AIFM2Q9BRQ8 373 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 CHRDL1Q9BU40 450 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 ATG5Q9H1Y0 275 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 SCN3BQ9NY72 215 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 PKHD1P08F94 4074 aa12.27□□□□□ -0.45
USE1-208ENST00000600970 DYNC1H1Q14204 4646 aaKnown RBP12.27□□□□□ -0.45
USE1-208ENST00000600970 MFAP2P55001 183 aa12.26□□□□□ -0.45
USE1-208ENST00000600970 ARL6IP1Q15041 203 aa12.26□□□□□ -0.45
USE1-208ENST00000600970 SPSB3Q6PJ21 355 aa12.26□□□□□ -0.45
USE1-208ENST00000600970 SPAG16Q8N0X2 631 aa12.26□□□□□ -0.45
USE1-208ENST00000600970 GVQW1Q8N7I0 195 aa12.26□□□□□ -0.45
USE1-208ENST00000600970 RNF2Q99496 336 aa12.26□□□□□ -0.45
USE1-208ENST00000600970 DCSTAMPQ9H295 470 aa12.26□□□□□ -0.45
USE1-208ENST00000600970 ACOT13Q9NPJ3 140 aa12.26□□□□□ -0.45
USE1-208ENST00000600970 UPK2O00526 184 aa12.25□□□□□ -0.45
USE1-208ENST00000600970 PDCD5O14737 125 aa12.25□□□□□ -0.45
USE1-208ENST00000600970 TNFSF12O43508 249 aa12.25□□□□□ -0.45
USE1-208ENST00000600970 XRCC3O43542 346 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms