RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 PALMDQ9NP74 551 aa11.36□□□□□ -0.59
SHKBP1-226ENST00000600791 KLK9Q9UKQ9 250 aa11.36□□□□□ -0.59
SHKBP1-226ENST00000600791 IGLV11-55A0A075B6I3 123 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 TRAV3A0A0B4J244 114 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 LGALS9O00182 355 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 XRCC3O43542 346 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 HPRT1P00492 218 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 FOLR2P14207 255 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 ARL3P36405 182 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 OR2B8PP59922 312 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 POU2AF1Q16633 256 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 DEFB114Q30KQ6 69 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 UBE2NLQ5JXB2 153 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 CLEC19AQ6UXS0 136 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 CROCCP3Q8IVE0 287 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 OR51H1Q8NH63 302 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 NEURL2Q9BR09 285 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 IFT46Q9NQC8 304 aa11.35□□□□□ -0.59
SHKBP1-226ENST00000600791 IGLC7A0M8Q6 106 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 ZNF785A8K8V0 405 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 S1PR2O95136 353 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 CD7P09564 240 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 NQO2P16083 231 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 HIST1H1BP16401 226 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 GNRHRP30968 328 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 RPS19P39019 145 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 AADACL3Q5VUY0 350 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 ZFAND6Q6FIF0 208 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 GPHB5Q86YW7 130 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 CACNG8Q8WXS5 425 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 EEF1AKMT3Q96AZ1 226 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 S100A16Q96FQ6 103 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 ZC4H2Q9NQZ6 224 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 TMEM140Q9NV12 185 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 EHFQ9NZC4 300 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 ANAPC10Q9UM13 185 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 CEPT1Q9Y6K0 416 aa11.34□□□□□ -0.59
SHKBP1-226ENST00000600791 MFSD2BA6NFX1 497 aa11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 UPK2O00526 184 aa11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 TPPPO94811 219 aa11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 DEFA4P12838 97 aa11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 TAS2R20P59543 309 aa11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 HERV-K104P61576 105 aa11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 TMEM69Q5SWH9 247 aa11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 LINC00322Q6ZN03 302 aaPredicted RBP11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 SAMD12Q8N8I0 201 aa11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 CD300LFQ8TDQ1 290 aa11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 YIPF6Q96EC8 236 aa11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 COMMD5Q9GZQ3 224 aa11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 WFDC10AQ9H1F0 79 aa11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 PLEKHA2Q9HB19 425 aa11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 SLC2A8Q9NY64 477 aa11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 TECRQ9NZ01 308 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-226ENST00000600791 TMEM213A2RRL7 107 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 A8MWP6 167 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 RLN1P04808 185 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 FGF2P09038 288 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 RPA2P15927 270 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 CBLN1P23435 193 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 RFX2P48378 723 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 LSM3P62310 102 aaKnown RBP11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 GUCA2BQ16661 112 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 DEFB125Q8N687 156 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 DMBX1Q8NFW5 382 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 BORCS5Q969J3 196 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 MOB3AQ96BX8 217 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 WDR89Q96FK6 387 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 CXorf58Q96LI9 332 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 SRSF8Q9BRL6 282 aaKnown RBP11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 ZNF2Q9BSG1 426 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 RETNQ9HD89 108 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 COMMD9Q9P000 198 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 SELENOKQ9Y6D0 94 aa11.32□□□□□ -0.6
SHKBP1-226ENST00000600791 TRBV7-1A0A0A6YYK4 115 aa11.31□□□□□ -0.6
SHKBP1-226ENST00000600791 ZNF320A2RRD8 509 aa11.31□□□□□ -0.6
SHKBP1-226ENST00000600791 MARCH11A6NNE9 402 aa11.31□□□□□ -0.6
SHKBP1-226ENST00000600791 PMP2P02689 132 aa11.31□□□□□ -0.6
SHKBP1-226ENST00000600791 FAM106AQ4KMX7 169 aa11.31□□□□□ -0.6
SHKBP1-226ENST00000600791 DHRS11Q6UWP2 260 aa11.31□□□□□ -0.6
SHKBP1-226ENST00000600791 TMEM61Q8N0U2 210 aa11.31□□□□□ -0.6
SHKBP1-226ENST00000600791 OR10W1Q8NGF6 305 aa11.31□□□□□ -0.6
SHKBP1-226ENST00000600791 LYSTQ99698 3801 aa11.31□□□□□ -0.6
SHKBP1-226ENST00000600791 QTRT1Q9BXR0 403 aaKnown RBP11.31□□□□□ -0.6
SHKBP1-226ENST00000600791 FXYD6Q9H0Q3 95 aa11.31□□□□□ -0.6
SHKBP1-226ENST00000600791 GAR1Q9NY12 217 aaKnown RBP11.31□□□□□ -0.6
SHKBP1-226ENST00000600791 RBMY1BA6NDE4 496 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-226ENST00000600791 RBMY1EA6NEQ0 496 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-226ENST00000600791 OR11H12B2RN74 326 aa11.3□□□□□ -0.6
SHKBP1-226ENST00000600791 PGLYRP1O75594 196 aaPredicted RBP11.3□□□□□ -0.6
SHKBP1-226ENST00000600791 IFNA6P05013 189 aa11.3□□□□□ -0.6
SHKBP1-226ENST00000600791 CLEC3BP05452 202 aa11.3□□□□□ -0.6
SHKBP1-226ENST00000600791 RBMY1DP0C7P1 496 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-226ENST00000600791 NAT1P18440 290 aa11.3□□□□□ -0.6
SHKBP1-226ENST00000600791 F2RP25116 425 aa11.3□□□□□ -0.6
SHKBP1-226ENST00000600791 GPR183P32249 361 aa11.3□□□□□ -0.6
SHKBP1-226ENST00000600791 TAS2R46P59540 309 aa11.3□□□□□ -0.6
SHKBP1-226ENST00000600791 ERVK-16P61578 105 aa11.3□□□□□ -0.6
SHKBP1-226ENST00000600791 UNQ9165/PRO28630Q6UXU0 137 aa11.3□□□□□ -0.6
SHKBP1-226ENST00000600791 TSPAN14Q8NG11 270 aa11.3□□□□□ -0.6
SHKBP1-226ENST00000600791 OR5H2Q8NGV7 314 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms