RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 IGKV1-39P01597 117 aa13.17□□□□□ -0.3
USHBP1-210ENST00000600286 IGKV1D-39P04432 117 aa13.17□□□□□ -0.3
USHBP1-210ENST00000600286 PROK1P58294 105 aa13.17□□□□□ -0.3
USHBP1-210ENST00000600286 SUPT4H1P63272 117 aaKnown RBP13.17□□□□□ -0.3
USHBP1-210ENST00000600286 TMEM95Q3KNT9 176 aa13.17□□□□□ -0.3
USHBP1-210ENST00000600286 AKIRIN2Q53H80 203 aa13.17□□□□□ -0.3
USHBP1-210ENST00000600286 UNQ5815/PRO19632Q6UWF5 114 aa13.17□□□□□ -0.3
USHBP1-210ENST00000600286 NRARPQ7Z6K4 114 aa13.17□□□□□ -0.3
USHBP1-210ENST00000600286 LYG2Q86SG7 212 aa13.17□□□□□ -0.3
USHBP1-210ENST00000600286 OR4X2Q8NGF9 303 aa13.17□□□□□ -0.3
USHBP1-210ENST00000600286 NOL4LQ96MY1 436 aaPredicted RBP13.17□□□□□ -0.3
USHBP1-210ENST00000600286 GPN1Q9HCN4 374 aaPredicted RBP13.17□□□□□ -0.3
USHBP1-210ENST00000600286 LINC00527Q9UJ94 153 aa13.17□□□□□ -0.3
USHBP1-210ENST00000600286 WSB1Q9Y6I7 421 aa13.17□□□□□ -0.3
USHBP1-210ENST00000600286 A0A0B4J2A0 478 aa13.16□□□□□ -0.3
USHBP1-210ENST00000600286 MSGN1A6NI15 193 aa13.16□□□□□ -0.3
USHBP1-210ENST00000600286 PTTG1O95997 202 aa13.16□□□□□ -0.3
USHBP1-210ENST00000600286 DHRS2Q13268 280 aa13.16□□□□□ -0.3
USHBP1-210ENST00000600286 ECSCRQ19T08 205 aa13.16□□□□□ -0.3
USHBP1-210ENST00000600286 THOC7Q6I9Y2 204 aaKnown RBP13.16□□□□□ -0.3
USHBP1-210ENST00000600286 TEX38Q6PEX7 206 aa13.16□□□□□ -0.3
USHBP1-210ENST00000600286 TMEM65Q6PI78 240 aa13.16□□□□□ -0.3
USHBP1-210ENST00000600286 OR5AU1Q8NGC0 362 aa13.16□□□□□ -0.3
USHBP1-210ENST00000600286 OR1L8Q8NGR8 309 aa13.16□□□□□ -0.3
USHBP1-210ENST00000600286 SRSF12Q8WXF0 261 aaKnown RBP13.16□□□□□ -0.3
USHBP1-210ENST00000600286 LSM10Q969L4 123 aaKnown RBP13.16□□□□□ -0.3
USHBP1-210ENST00000600286 FYTTD1Q96QD9 318 aaKnown RBP13.16□□□□□ -0.3
USHBP1-210ENST00000600286 WNT10AQ9GZT5 417 aa13.16□□□□□ -0.3
USHBP1-210ENST00000600286 SHPKQ9UHJ6 478 aa13.16□□□□□ -0.3
USHBP1-210ENST00000600286 OR51B2Q9Y5P1 312 aa13.16□□□□□ -0.3
USHBP1-210ENST00000600286 INMT-MINDY4F8WBC2 141 aa13.15□□□□□ -0.3
USHBP1-210ENST00000600286 PRAF2O60831 178 aa13.15□□□□□ -0.3
USHBP1-210ENST00000600286 DUS4LO95620 317 aaKnown RBP13.15□□□□□ -0.3
USHBP1-210ENST00000600286 IFNA21P01568 189 aa13.15□□□□□ -0.3
USHBP1-210ENST00000600286 IL6RP08887 468 aaPredicted RBP13.15□□□□□ -0.3
USHBP1-210ENST00000600286 CRIP2P52943 208 aaPredicted RBP13.15□□□□□ -0.3
USHBP1-210ENST00000600286 LRTM2Q8N967 370 aa13.15□□□□□ -0.3
USHBP1-210ENST00000600286 LFNGQ8NES3 379 aa13.15□□□□□ -0.3
USHBP1-210ENST00000600286 OR5B3Q8NH48 314 aa13.15□□□□□ -0.3
USHBP1-210ENST00000600286 FAM103A1Q9BTL3 118 aaKnown RBP13.15□□□□□ -0.3
USHBP1-210ENST00000600286 HINT2Q9BX68 163 aa13.15□□□□□ -0.3
USHBP1-210ENST00000600286 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.15□□□□□ -0.3
USHBP1-210ENST00000600286 TRAV3A0A0B4J244 114 aa13.14□□□□□ -0.31
USHBP1-210ENST00000600286 C15orf61A6NNL5 157 aa13.14□□□□□ -0.31
USHBP1-210ENST00000600286 CYB5BO43169 146 aa13.14□□□□□ -0.31
USHBP1-210ENST00000600286 IGKV1-5P01602 117 aa13.14□□□□□ -0.31
USHBP1-210ENST00000600286 IL5P05113 134 aa13.14□□□□□ -0.31
USHBP1-210ENST00000600286 OR9G9P0C7N8 305 aa13.14□□□□□ -0.31
USHBP1-210ENST00000600286 TRAPPC2P0DI81 140 aa13.14□□□□□ -0.31
USHBP1-210ENST00000600286 TRAPPC2BP0DI82 140 aa13.14□□□□□ -0.31
USHBP1-210ENST00000600286 HSD17B13Q7Z5P4 300 aaPredicted RBP13.14□□□□□ -0.31
USHBP1-210ENST00000600286 SLC35G3Q8N808 338 aa13.14□□□□□ -0.31
USHBP1-210ENST00000600286 OR5M8Q8NGP6 311 aa13.14□□□□□ -0.31
USHBP1-210ENST00000600286 SRSF8Q9BRL6 282 aaKnown RBP13.14□□□□□ -0.31
USHBP1-210ENST00000600286 ZNF747Q9BV97 191 aa13.14□□□□□ -0.31
USHBP1-210ENST00000600286 QTRT1Q9BXR0 403 aaKnown RBP13.14□□□□□ -0.31
USHBP1-210ENST00000600286 ZNF355PQ9NSJ1 428 aa13.14□□□□□ -0.31
USHBP1-210ENST00000600286 FOXA2Q9Y261 457 aaPredicted RBP13.14□□□□□ -0.31
USHBP1-210ENST00000600286 NSG2Q9Y328 171 aa13.14□□□□□ -0.31
USHBP1-210ENST00000600286 TMED3Q9Y3Q3 217 aa13.14□□□□□ -0.31
USHBP1-210ENST00000600286 TEX50A0A1B0GTY4 177 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 A0A1W2PN81 502 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 FBXO24O75426 580 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 IFNA17P01571 189 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 OPN1MWP04001 364 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 ELANEP08246 267 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 SULT1A3P0DMM9 295 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 SULT1A4P0DMN0 295 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 OPN1MW2P0DN77 364 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 OPN1MW3P0DN78 364 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 CHRNA7P36544 502 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 MECP2P51608 486 aaKnown RBP13.13□□□□□ -0.31
USHBP1-210ENST00000600286 NDPQ00604 133 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 RGS21Q2M5E4 152 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 ANKRD55Q3KP44 614 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 CXorf66Q5JRM2 361 aaPredicted RBP13.13□□□□□ -0.31
USHBP1-210ENST00000600286 SHISA2Q6UWI4 295 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 LYZL2Q7Z4W2 148 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 ZNF329Q86UD4 541 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 LHFPL5Q8TAF8 219 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 ZNF431Q8TF32 576 aaPredicted RBP13.13□□□□□ -0.31
USHBP1-210ENST00000600286 WFDC12Q8WWY7 111 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 ENY2Q9NPA8 101 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 TMEM14BQ9NUH8 114 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 PRR13Q9NZ81 148 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 ZNF257Q9Y2Q1 563 aa13.13□□□□□ -0.31
USHBP1-210ENST00000600286 A0A1B0GU03 582 aa13.12□□□□□ -0.31
USHBP1-210ENST00000600286 G3V318 75 aa13.12□□□□□ -0.31
USHBP1-210ENST00000600286 HOXB5P09067 269 aa13.12□□□□□ -0.31
USHBP1-210ENST00000600286 EGR2P11161 476 aaPredicted RBP13.12□□□□□ -0.31
USHBP1-210ENST00000600286 OR2B8PP59922 312 aa13.12□□□□□ -0.31
USHBP1-210ENST00000600286 HSPE1P61604 102 aaKnown RBP13.12□□□□□ -0.31
USHBP1-210ENST00000600286 FOXE3Q13461 319 aa13.12□□□□□ -0.31
USHBP1-210ENST00000600286 MRGPRG-AS1Q2M3A8 158 aa13.12□□□□□ -0.31
USHBP1-210ENST00000600286 ZNF429Q86V71 674 aa13.12□□□□□ -0.31
USHBP1-210ENST00000600286 UXS1Q8NBZ7 420 aa13.12□□□□□ -0.31
USHBP1-210ENST00000600286 MITD1Q8WV92 249 aa13.12□□□□□ -0.31
USHBP1-210ENST00000600286 GPR146Q96CH1 333 aa13.12□□□□□ -0.31
USHBP1-210ENST00000600286 MARVELD1Q9BSK0 173 aa13.12□□□□□ -0.31
USHBP1-210ENST00000600286 CACNG5Q9UF02 275 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms