RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 GNG2P59768 71 aa15.78■□□□□ 0.12
PNKP-212ENST00000599454 TNFRSF9Q07011 255 aa15.78■□□□□ 0.12
PNKP-212ENST00000599454 SSX9Q7RTT3 188 aa15.78■□□□□ 0.12
PNKP-212ENST00000599454 SLC38A6Q8IZM9 456 aa15.78■□□□□ 0.12
PNKP-212ENST00000599454 OR2C3Q8N628 320 aa15.78■□□□□ 0.12
PNKP-212ENST00000599454 NUDCD2Q8WVJ2 157 aa15.78■□□□□ 0.12
PNKP-212ENST00000599454 THYN1Q9P016 225 aa15.78■□□□□ 0.12
PNKP-212ENST00000599454 MFSD2BA6NFX1 497 aa15.77■□□□□ 0.12
PNKP-212ENST00000599454 UBE2CO00762 179 aa15.77■□□□□ 0.12
PNKP-212ENST00000599454 MYOD1P15172 320 aa15.77■□□□□ 0.12
PNKP-212ENST00000599454 PMS2P11Q13670 270 aa15.77■□□□□ 0.12
PNKP-212ENST00000599454 UNQ9165/PRO28630Q6UXU0 137 aa15.77■□□□□ 0.12
PNKP-212ENST00000599454 NR2C2APQ86WQ0 139 aa15.77■□□□□ 0.12
PNKP-212ENST00000599454 SPAG8Q99932 426 aaPredicted RBP15.77■□□□□ 0.12
PNKP-212ENST00000599454 SRSF8Q9BRL6 282 aaKnown RBP15.77■□□□□ 0.12
PNKP-212ENST00000599454 C5orf66Q9H5L9 145 aa15.77■□□□□ 0.12
PNKP-212ENST00000599454 BLOC1S6Q9UL45 172 aa15.77■□□□□ 0.12
PNKP-212ENST00000599454 A0A0J9YWU9 116 aa15.76■□□□□ 0.11
PNKP-212ENST00000599454 TMEM235A6NFC5 223 aa15.76■□□□□ 0.11
PNKP-212ENST00000599454 RBFOX2O43251 390 aaKnown RBP eCLIP15.76■□□□□ 0.11
PNKP-212ENST00000599454 REG1AP05451 166 aa15.76■□□□□ 0.11
PNKP-212ENST00000599454 TIMM50Q3ZCQ8 353 aa15.76■□□□□ 0.11
PNKP-212ENST00000599454 ZNF585BQ52M93 769 aa15.76■□□□□ 0.11
PNKP-212ENST00000599454 C22orf42Q6IC83 251 aa15.76■□□□□ 0.11
PNKP-212ENST00000599454 PLET1Q6UQ28 207 aa15.76■□□□□ 0.11
PNKP-212ENST00000599454 ZBTB34Q8NCN2 500 aa15.76■□□□□ 0.11
PNKP-212ENST00000599454 ZNF502Q8TBZ5 544 aa15.76■□□□□ 0.11
PNKP-212ENST00000599454 HRASLSQ9HDD0 168 aa15.76■□□□□ 0.11
PNKP-212ENST00000599454 CGB1A6NKQ9 187 aa15.75■□□□□ 0.11
PNKP-212ENST00000599454 NOTOA8MTQ0 251 aa15.75■□□□□ 0.11
PNKP-212ENST00000599454 CYB5BO43169 146 aa15.75■□□□□ 0.11
PNKP-212ENST00000599454 SPRY2O43597 315 aa15.75■□□□□ 0.11
PNKP-212ENST00000599454 FGF2P09038 288 aa15.75■□□□□ 0.11
PNKP-212ENST00000599454 GPR183P32249 361 aa15.75■□□□□ 0.11
PNKP-212ENST00000599454 OR2B8PP59922 312 aa15.75■□□□□ 0.11
PNKP-212ENST00000599454 CEMP1Q6PRD7 247 aaPredicted RBP15.75■□□□□ 0.11
PNKP-212ENST00000599454 LYG2Q86SG7 212 aa15.75■□□□□ 0.11
PNKP-212ENST00000599454 NRG4Q8WWG1 115 aa15.75■□□□□ 0.11
PNKP-212ENST00000599454 ZNF436Q9C0F3 470 aaPredicted RBP15.75■□□□□ 0.11
PNKP-212ENST00000599454 KLK5Q9Y337 293 aaPredicted RBP15.75■□□□□ 0.11
PNKP-212ENST00000599454 SSX5O60225 188 aa15.74■□□□□ 0.11
PNKP-212ENST00000599454 PTBP1P26599 531 aaKnown RBP eCLIP15.74■□□□□ 0.11
PNKP-212ENST00000599454 TAS2R31P59538 309 aa15.74■□□□□ 0.11
PNKP-212ENST00000599454 POU2AF1Q16633 256 aa15.74■□□□□ 0.11
PNKP-212ENST00000599454 THOC7Q6I9Y2 204 aaKnown RBP15.74■□□□□ 0.11
PNKP-212ENST00000599454 SPAG16Q8N0X2 631 aa15.74■□□□□ 0.11
PNKP-212ENST00000599454 KIR2DL5BA0A0G2JN68 375 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 KIR2DL5BA0A0G2JPC4 375 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 IGLC7A0M8Q6 106 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 TSPAN4O14817 238 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 ARPC4P59998 168 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 CATR1Q13166 79 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 KIR2DL5AQ8N109 375 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 TMEM217Q8N7C4 229 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 KIR2DL5BQ8NHK3 375 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 VN1R17PQ8TDU5 208 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 SECTM1Q8WVN6 248 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 TMEM190Q8WZ59 177 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 GPHA2Q96T91 129 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 COMMD5Q9GZQ3 224 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 CCL28Q9NRJ3 127 aa15.73■□□□□ 0.11
PNKP-212ENST00000599454 TGOLN2O43493 480 aa15.72■□□□□ 0.11
PNKP-212ENST00000599454 TNFSF12O43508 249 aa15.72■□□□□ 0.11
PNKP-212ENST00000599454 HPRT1P00492 218 aa15.72■□□□□ 0.11
PNKP-212ENST00000599454 NQO2P16083 231 aa15.72■□□□□ 0.11
PNKP-212ENST00000599454 FGF9P31371 208 aaPredicted RBP15.72■□□□□ 0.11
PNKP-212ENST00000599454 FCGR2CP31995 323 aa15.72■□□□□ 0.11
PNKP-212ENST00000599454 DEFB135Q30KP9 77 aa15.72■□□□□ 0.11
PNKP-212ENST00000599454 LAMTOR1Q6IAA8 161 aa15.72■□□□□ 0.11
PNKP-212ENST00000599454 TPRA1Q86W33 373 aa15.72■□□□□ 0.11
PNKP-212ENST00000599454 STPG3Q8N7X2 389 aa15.72■□□□□ 0.11
PNKP-212ENST00000599454 OR13F1Q8NGS4 319 aa15.72■□□□□ 0.11
PNKP-212ENST00000599454 SMIM30A4D0T7 59 aa15.71■□□□□ 0.11
PNKP-212ENST00000599454 UPK2O00526 184 aa15.71■□□□□ 0.11
PNKP-212ENST00000599454 EWSR1Q01844 656 aaKnown RBP eCLIP15.71■□□□□ 0.11
PNKP-212ENST00000599454 HSD17B13Q7Z5P4 300 aaPredicted RBP15.71■□□□□ 0.11
PNKP-212ENST00000599454 BEST4Q8NFU0 473 aa15.71■□□□□ 0.11
PNKP-212ENST00000599454 RNF183Q96D59 192 aa15.71■□□□□ 0.11
PNKP-212ENST00000599454 ATP6V0BQ99437 205 aa15.71■□□□□ 0.11
PNKP-212ENST00000599454 QTRT1Q9BXR0 403 aaKnown RBP15.71■□□□□ 0.11
PNKP-212ENST00000599454 VCX3BQ9H321 246 aa15.71■□□□□ 0.11
PNKP-212ENST00000599454 DAZ1Q9NQZ3 744 aaKnown RBP15.71■□□□□ 0.11
PNKP-212ENST00000599454 DAPK2Q9UIK4 370 aa15.71■□□□□ 0.11
PNKP-212ENST00000599454 IGHV3-35A0A0C4DH35 117 aa15.7■□□□□ 0.1
PNKP-212ENST00000599454 PPYP01298 95 aa15.7■□□□□ 0.1
PNKP-212ENST00000599454 HSPA13P48723 471 aa15.7■□□□□ 0.1
PNKP-212ENST00000599454 LGALS14Q8TCE9 139 aa15.7■□□□□ 0.1
PNKP-212ENST00000599454 CD300LFQ8TDQ1 290 aa15.7■□□□□ 0.1
PNKP-212ENST00000599454 BSCL2Q96G97 398 aaPredicted RBP15.7■□□□□ 0.1
PNKP-212ENST00000599454 TXNL4BQ9NX01 149 aaKnown RBP15.7■□□□□ 0.1
PNKP-212ENST00000599454 RHBDL2Q9NX52 303 aa15.7■□□□□ 0.1
PNKP-212ENST00000599454 SULT1C2O00338 296 aa15.69■□□□□ 0.1
PNKP-212ENST00000599454 MRPS14O60783 128 aaKnown RBP15.69■□□□□ 0.1
PNKP-212ENST00000599454 SCAND1P57086 179 aa15.69■□□□□ 0.1
PNKP-212ENST00000599454 SPSB3Q6PJ21 355 aa15.69■□□□□ 0.1
PNKP-212ENST00000599454 HOGA1Q86XE5 327 aa15.69■□□□□ 0.1
PNKP-212ENST00000599454 GDPD1Q8N9F7 314 aa15.69■□□□□ 0.1
PNKP-212ENST00000599454 SLC5A7Q9GZV3 580 aa15.69■□□□□ 0.1
PNKP-212ENST00000599454 PLEKHA2Q9HB19 425 aa15.69■□□□□ 0.1
PNKP-212ENST00000599454 TMEM140Q9NV12 185 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms