RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 EDN2P20800 178 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 PSMB6P28072 239 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 C15orf32Q32M92 178 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 NECAP1Q8NC96 275 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 OR6Q1Q8NGQ2 317 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 OR4A5Q8NH83 315 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 FCAMRQ8WWV6 532 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 OR4C12Q96R67 309 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 ABHD1Q96SE0 405 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 COMMD9Q9P000 198 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 S4R3C0 116 aa9.24□□□□□ -0.93
LIG1-217ENST00000599165 IZUMO1RA6ND01 250 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 DBX1A6NMT0 343 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 PPP5D1E7EU14 171 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 GPR31O00270 319 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 LY86O95711 162 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 IGKV1-39P01597 117 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 IGHV3-23P01764 117 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 HLA-AP01891 365 aaKnown RBP9.23□□□□□ -0.93
LIG1-217ENST00000599165 IGKV1D-39P04432 117 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 F2RP25116 425 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 RCVRNP35243 200 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 ATP5G2Q06055 141 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 DCTN2Q13561 401 aaKnown RBP9.23□□□□□ -0.93
LIG1-217ENST00000599165 RNASE12Q5GAN4 147 aaKnown RBP9.23□□□□□ -0.93
LIG1-217ENST00000599165 OR10W1Q8NGF6 305 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 OR6F1Q8NGZ6 308 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 OR52I2Q8NH67 350 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 DGCR14Q96DF8 476 aaKnown RBP9.23□□□□□ -0.93
LIG1-217ENST00000599165 ASCL2Q99929 193 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 RSRP1Q9BUV0 290 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 HRASLSQ9HDD0 168 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 KLK11Q9UBX7 282 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 FBXL7Q9UJT9 491 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 SMAD5-AS1Q9Y6J3 95 aa9.23□□□□□ -0.93
LIG1-217ENST00000599165 MFSD2BA6NFX1 497 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 MARCH11A6NNE9 402 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 M0QYG6 137 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 FGF2P09038 288 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 LPAR6P43657 344 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 WT1-ASQ06250 92 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 PHLDA2Q53GA4 152 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 GPR141Q7Z602 305 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 SLC25A42Q86VD7 318 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 LHFPL1Q86WI0 220 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 SBSPONQ8IVN8 264 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 OR4D10Q8NGI6 311 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 CD300LFQ8TDQ1 290 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 MRGPRFQ96AM1 343 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 SIGLEC8Q9NYZ4 499 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 EXTL2Q9UBQ6 330 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 RYR3Q15413 4870 aa9.22□□□□□ -0.93
LIG1-217ENST00000599165 TEX50A0A1B0GTY4 177 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 SMIM31A0A1B0GVY4 71 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 CTDSP2O14595 271 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 G6PCP35575 357 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 MFAP2P55001 183 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 UCP3P55916 312 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 RPEL1Q2QD12 228 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 MZT2AQ6P582 158 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 LAX1Q8IWV1 398 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 CADM3Q8N126 398 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 AP3S1Q92572 193 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 BORCS5Q969J3 196 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 ZNF414Q96IQ9 312 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 ELOVL1Q9BW60 279 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 MTFP1Q9UDX5 166 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 NSG2Q9Y328 171 aa9.21□□□□□ -0.94
LIG1-217ENST00000599165 FAM25AB3EWG3 89 aa9.2□□□□□ -0.94
LIG1-217ENST00000599165 FAM25CB3EWG5 89 aa9.2□□□□□ -0.94
LIG1-217ENST00000599165 FAM25GB3EWG6 89 aa9.2□□□□□ -0.94
LIG1-217ENST00000599165 OR2C1O95371 312 aa9.2□□□□□ -0.94
LIG1-217ENST00000599165 KRASP01116 189 aa9.2□□□□□ -0.94
LIG1-217ENST00000599165 CD3DP04234 171 aa9.2□□□□□ -0.94
LIG1-217ENST00000599165 FRMD6-AS1P0C7T7 363 aa9.2□□□□□ -0.94
LIG1-217ENST00000599165 NHLRC4P0CG21 123 aaPredicted RBP9.2□□□□□ -0.94
LIG1-217ENST00000599165 TBC1D26Q86UD7 250 aa9.2□□□□□ -0.94
LIG1-217ENST00000599165 CLVS1Q8IUQ0 354 aaPredicted RBP9.2□□□□□ -0.94
LIG1-217ENST00000599165 DMBX1Q8NFW5 382 aa9.2□□□□□ -0.94
LIG1-217ENST00000599165 DYNC2LI1Q8TCX1 351 aa9.2□□□□□ -0.94
LIG1-217ENST00000599165 SRSF8Q9BRL6 282 aaKnown RBP9.2□□□□□ -0.94
LIG1-217ENST00000599165 AIFM2Q9BRQ8 373 aa9.2□□□□□ -0.94
LIG1-217ENST00000599165 QTRT1Q9BXR0 403 aaKnown RBP9.2□□□□□ -0.94
LIG1-217ENST00000599165 NDUFA4L2Q9NRX3 87 aa9.2□□□□□ -0.94
LIG1-217ENST00000599165 C19orf73Q9NVV2 129 aa9.2□□□□□ -0.94
LIG1-217ENST00000599165 DPPA5A6NC42 116 aa9.19□□□□□ -0.94
LIG1-217ENST00000599165 TPPPO94811 219 aa9.19□□□□□ -0.94
LIG1-217ENST00000599165 CD74P04233 296 aa9.19□□□□□ -0.94
LIG1-217ENST00000599165 PI3P19957 117 aa9.19□□□□□ -0.94
LIG1-217ENST00000599165 PTBP1P26599 531 aaKnown RBP eCLIP9.19□□□□□ -0.94
LIG1-217ENST00000599165 TSPAN5P62079 268 aa9.19□□□□□ -0.94
LIG1-217ENST00000599165 CLEC19AQ6UXS0 136 aa9.19□□□□□ -0.94
LIG1-217ENST00000599165 CMTM1Q8IZ96 169 aa9.19□□□□□ -0.94
LIG1-217ENST00000599165 ZNF502Q8TBZ5 544 aa9.19□□□□□ -0.94
LIG1-217ENST00000599165 SEC22AQ96IW7 307 aa9.19□□□□□ -0.94
LIG1-217ENST00000599165 COMMD5Q9GZQ3 224 aa9.19□□□□□ -0.94
LIG1-217ENST00000599165 TMEM14BQ9NUH8 114 aa9.19□□□□□ -0.94
LIG1-217ENST00000599165 U3KQK5 164 aa9.19□□□□□ -0.94
LIG1-217ENST00000599165 DNAH7Q8WXX0 4024 aa9.19□□□□□ -0.94
LIG1-217ENST00000599165 TMEM213A2RRL7 107 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms